RNA–Protein interactions for RNA: ENST00000553823.5

NEK9-202, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-202ENST00000553823 CCT2P78371 535 aaKnown RBP13.76□□□□□ -0.21
NEK9-202ENST00000553823 MAP3K10Q02779 954 aa13.76□□□□□ -0.21
NEK9-202ENST00000553823 SCRN1Q12765 414 aa13.76□□□□□ -0.21
NEK9-202ENST00000553823 RCSD1Q6JBY9 416 aa13.76□□□□□ -0.21
NEK9-202ENST00000553823 CATIPQ7Z7H3 387 aa13.76□□□□□ -0.21
NEK9-202ENST00000553823 ZNF654Q8IZM8 581 aa13.76□□□□□ -0.21
NEK9-202ENST00000553823 DCPSQ96C86 337 aaKnown RBP13.76□□□□□ -0.21
NEK9-202ENST00000553823 HOOK2Q96ED9 719 aa13.76□□□□□ -0.21
NEK9-202ENST00000553823 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.76□□□□□ -0.21
NEK9-202ENST00000553823 TAF1DQ9H5J8 278 aaPredicted RBP13.76□□□□□ -0.21
NEK9-202ENST00000553823 CWC22Q9HCG8 908 aaKnown RBP13.76□□□□□ -0.21
NEK9-202ENST00000553823 IGKV6D-41A0A0C4DH26 115 aa13.75□□□□□ -0.21
NEK9-202ENST00000553823 DHX16O60231 1041 aaKnown RBP13.75□□□□□ -0.21
NEK9-202ENST00000553823 DDAH1O94760 285 aa13.75□□□□□ -0.21
NEK9-202ENST00000553823 METAP2P50579 478 aaKnown RBP eCLIP13.75□□□□□ -0.21
NEK9-202ENST00000553823 ABCB5Q2M3G0 1257 aa13.75□□□□□ -0.21
NEK9-202ENST00000553823 PPP4R3BQ5MIZ7 849 aa13.75□□□□□ -0.21
NEK9-202ENST00000553823 MIGA2Q7L4E1 593 aa13.75□□□□□ -0.21
NEK9-202ENST00000553823 MICU3Q86XE3 530 aa13.75□□□□□ -0.21
NEK9-202ENST00000553823 RAB11FIP4Q86YS3 637 aa13.75□□□□□ -0.21
NEK9-202ENST00000553823 ZC3H15Q8WU90 426 aaKnown RBP13.75□□□□□ -0.21
NEK9-202ENST00000553823 CEP95Q96GE4 821 aa13.75□□□□□ -0.21
NEK9-202ENST00000553823 KAT14Q9H8E8 782 aa13.75□□□□□ -0.21
NEK9-202ENST00000553823 STX8Q9UNK0 236 aa13.75□□□□□ -0.21
NEK9-202ENST00000553823 BAZ2BQ9UIF8 2168 aaKnown RBP13.74□□□□□ -0.21
NEK9-202ENST00000553823 GOLGA8AA7E2F4 631 aa13.74□□□□□ -0.21
NEK9-202ENST00000553823 POTECB2RU33 542 aa13.74□□□□□ -0.21
NEK9-202ENST00000553823 GDF11O95390 407 aa13.74□□□□□ -0.21
NEK9-202ENST00000553823 CALM1P0DP23 149 aa13.74□□□□□ -0.21
NEK9-202ENST00000553823 CALM2P0DP24 149 aa13.74□□□□□ -0.21
NEK9-202ENST00000553823 CALM3P0DP25 149 aa13.74□□□□□ -0.21
NEK9-202ENST00000553823 TOP1P11387 765 aaKnown RBP13.74□□□□□ -0.21
NEK9-202ENST00000553823 RXRAP19793 462 aa13.74□□□□□ -0.21
NEK9-202ENST00000553823 NOVP48745 357 aa13.74□□□□□ -0.21
NEK9-202ENST00000553823 NBPF12Q5TAG4 269 aaPredicted RBP13.74□□□□□ -0.21
NEK9-202ENST00000553823 DCAF15Q66K64 600 aa13.74□□□□□ -0.21
NEK9-202ENST00000553823 TMEM179Q6ZVK1 233 aa13.74□□□□□ -0.21
NEK9-202ENST00000553823 PNMA8AQ86V59 439 aaPredicted RBP13.74□□□□□ -0.21
NEK9-202ENST00000553823 SULF1Q8IWU6 871 aa13.74□□□□□ -0.21
NEK9-202ENST00000553823 NUP133Q8WUM0 1156 aa13.74□□□□□ -0.21
NEK9-202ENST00000553823 TMEM47Q9BQJ4 181 aa13.74□□□□□ -0.21
NEK9-202ENST00000553823 LLPHQ9BRT6 129 aaKnown RBP13.74□□□□□ -0.21
NEK9-202ENST00000553823 MYL10Q9BUA6 226 aa13.74□□□□□ -0.21
NEK9-202ENST00000553823 NCOA5Q9HCD5 579 aaKnown RBP13.74□□□□□ -0.21
NEK9-202ENST00000553823 CABP5Q9NP86 173 aa13.74□□□□□ -0.21
NEK9-202ENST00000553823 MTMR4Q9NYA4 1195 aa13.74□□□□□ -0.21
NEK9-202ENST00000553823 SMC3Q9UQE7 1217 aa13.74□□□□□ -0.21
NEK9-202ENST00000553823 ATAD5Q96QE3 1844 aa13.74□□□□□ -0.21
NEK9-202ENST00000553823 NID2Q14112 1375 aa13.73□□□□□ -0.21
NEK9-202ENST00000553823 MYH6P13533 1939 aa13.73□□□□□ -0.21
NEK9-202ENST00000553823 CPLX1O14810 134 aa13.73□□□□□ -0.21
NEK9-202ENST00000553823 TTLL1O95922 423 aa13.73□□□□□ -0.21
NEK9-202ENST00000553823 RRP1BQ14684 758 aaKnown RBP13.73□□□□□ -0.21
NEK9-202ENST00000553823 PPP2R5BQ15173 497 aa13.73□□□□□ -0.21
NEK9-202ENST00000553823 RTN1Q16799 776 aa13.73□□□□□ -0.21
NEK9-202ENST00000553823 EAPPQ56P03 285 aaPredicted RBP13.73□□□□□ -0.21
NEK9-202ENST00000553823 PNMA1Q8ND90 353 aa13.73□□□□□ -0.21
NEK9-202ENST00000553823 KANSL2Q9H9L4 492 aa13.73□□□□□ -0.21
NEK9-202ENST00000553823 CCDC196A0A1B0GTZ2 297 aa13.72□□□□□ -0.21
NEK9-202ENST00000553823 GH2P01242 217 aa13.72□□□□□ -0.21
NEK9-202ENST00000553823 CDC27P30260 824 aa13.72□□□□□ -0.21
NEK9-202ENST00000553823 DDIT3P35638 169 aa13.72□□□□□ -0.21
NEK9-202ENST00000553823 TROAPQ12815 778 aa13.72□□□□□ -0.21
NEK9-202ENST00000553823 SEPT2Q15019 361 aa13.72□□□□□ -0.21
NEK9-202ENST00000553823 SHROOM1Q2M3G4 852 aaPredicted RBP13.72□□□□□ -0.21
NEK9-202ENST00000553823 SUPT20HL1Q3ZLR7 823 aa13.72□□□□□ -0.21
NEK9-202ENST00000553823 PRAMEF18Q5VWM3 479 aa13.72□□□□□ -0.21
NEK9-202ENST00000553823 CPLX2Q6PUV4 134 aaKnown RBP13.72□□□□□ -0.21
NEK9-202ENST00000553823 KRT26Q7Z3Y9 468 aa13.72□□□□□ -0.21
NEK9-202ENST00000553823 CLEC10AQ8IUN9 316 aa13.72□□□□□ -0.21
NEK9-202ENST00000553823 CCDC144CPQ8IYA2 1237 aa13.72□□□□□ -0.21
NEK9-202ENST00000553823 FANCBQ8NB91 859 aa13.72□□□□□ -0.21
NEK9-202ENST00000553823 NSUN7Q8NE18 718 aaKnown RBP13.72□□□□□ -0.21
NEK9-202ENST00000553823 ZNF341Q9BYN7 854 aa13.72□□□□□ -0.21
NEK9-202ENST00000553823 CIZ1Q9ULV3 898 aaPredicted RBP13.72□□□□□ -0.21
NEK9-202ENST00000553823 PHF20L1A8MW92 1017 aa13.71□□□□□ -0.21
NEK9-202ENST00000553823 JAK2O60674 1132 aa13.71□□□□□ -0.21
NEK9-202ENST00000553823 CDKL5O76039 1030 aa13.71□□□□□ -0.21
NEK9-202ENST00000553823 CTDNEP1O95476 244 aa13.71□□□□□ -0.21
NEK9-202ENST00000553823 VEGFAP15692 232 aaPredicted RBP13.71□□□□□ -0.21
NEK9-202ENST00000553823 GJB2P29033 226 aa13.71□□□□□ -0.21
NEK9-202ENST00000553823 GUCY1A2P33402 732 aa13.71□□□□□ -0.21
NEK9-202ENST00000553823 ADD1P35611 737 aaKnown RBP13.71□□□□□ -0.21
NEK9-202ENST00000553823 CAP2P40123 477 aa13.71□□□□□ -0.21
NEK9-202ENST00000553823 JAG1P78504 1218 aa13.71□□□□□ -0.21
NEK9-202ENST00000553823 HMGN5P82970 282 aaKnown RBP13.71□□□□□ -0.21
NEK9-202ENST00000553823 ATP2B2Q01814 1243 aa13.71□□□□□ -0.21
NEK9-202ENST00000553823 ICA1Q05084 483 aa13.71□□□□□ -0.21
NEK9-202ENST00000553823 CTCFLQ8NI51 663 aaPredicted RBP13.71□□□□□ -0.21
NEK9-202ENST00000553823 SMARCC2Q8TAQ2 1214 aa13.71□□□□□ -0.21
NEK9-202ENST00000553823 MAP3K14Q99558 947 aa13.71□□□□□ -0.21
NEK9-202ENST00000553823 FAM217BQ9NTX9 383 aaPredicted RBP13.71□□□□□ -0.21
NEK9-202ENST00000553823 RBM28Q9NW13 759 aaKnown RBP13.71□□□□□ -0.21
NEK9-202ENST00000553823 CHMP5Q9NZZ3 219 aa13.71□□□□□ -0.21
NEK9-202ENST00000553823 NYAP2Q9P242 653 aa13.71□□□□□ -0.21
NEK9-202ENST00000553823 CLIP2Q9UDT6 1046 aa13.71□□□□□ -0.21
NEK9-202ENST00000553823 ZBTB21Q9ULJ3 1066 aa13.71□□□□□ -0.21
NEK9-202ENST00000553823 PTPDC1A2A3K4 754 aa13.7□□□□□ -0.22
NEK9-202ENST00000553823 ADM5C9JUS6 153 aa13.7□□□□□ -0.22
NEK9-202ENST00000553823 ASNSP08243 561 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms