RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 MPSTP25325 297 aa4.67□□□□□ -1.66
RDH11-204ENST00000553578 TCEAL1Q15170 157 aa4.67□□□□□ -1.66
RDH11-204ENST00000553578 ZC3H12AQ5D1E8 599 aaKnown RBP4.67□□□□□ -1.66
RDH11-204ENST00000553578 CCDC102BQ68D86 513 aa4.67□□□□□ -1.66
RDH11-204ENST00000553578 MSL3Q8N5Y2 521 aaKnown RBP4.67□□□□□ -1.66
RDH11-204ENST00000553578 JMYQ8N9B5 988 aa4.67□□□□□ -1.66
RDH11-204ENST00000553578 PMM1Q92871 262 aa4.67□□□□□ -1.66
RDH11-204ENST00000553578 SPACA7Q96KW9 195 aa4.67□□□□□ -1.66
RDH11-204ENST00000553578 DNAAF2Q9NVR5 837 aaKnown RBP4.67□□□□□ -1.66
RDH11-204ENST00000553578 NOL7Q9UMY1 257 aaKnown RBP4.67□□□□□ -1.66
RDH11-204ENST00000553578 DOLKQ9UPQ8 538 aa4.67□□□□□ -1.66
RDH11-204ENST00000553578 ZKSCAN5Q9Y2L8 839 aa4.67□□□□□ -1.66
RDH11-204ENST00000553578 TRIM14Q14142 442 aa4.67□□□□□ -1.66
RDH11-204ENST00000553578 PLA2G4EQ3MJ16 856 aa4.67□□□□□ -1.66
RDH11-204ENST00000553578 ZNF787Q6DD87 383 aa4.67□□□□□ -1.66
RDH11-204ENST00000553578 CNNM4Q6P4Q7 775 aa4.67□□□□□ -1.66
RDH11-204ENST00000553578 SHQ1Q6PI26 577 aaKnown RBP4.67□□□□□ -1.66
RDH11-204ENST00000553578 ATF7IPQ6VMQ6 1270 aa4.67□□□□□ -1.66
RDH11-204ENST00000553578 KIFC2Q96AC6 838 aa4.67□□□□□ -1.66
RDH11-204ENST00000553578 ATP13A2Q9NQ11 1180 aa4.67□□□□□ -1.66
RDH11-204ENST00000553578 AASDHPPTQ9NRN7 309 aa4.67□□□□□ -1.66
RDH11-204ENST00000553578 TMPRSS4Q9NRS4 437 aa4.67□□□□□ -1.66
RDH11-204ENST00000553578 SERTAD1Q9UHV2 236 aa4.67□□□□□ -1.66
RDH11-204ENST00000553578 SPATA31A3Q5VYP0 1347 aa4.66□□□□□ -1.66
RDH11-204ENST00000553578 SALL3Q9BXA9 1300 aa4.66□□□□□ -1.66
RDH11-204ENST00000553578 ECEL1O95672 775 aa4.66□□□□□ -1.66
RDH11-204ENST00000553578 LDHAP00338 332 aaKnown RBP4.66□□□□□ -1.66
RDH11-204ENST00000553578 SETSIPP0DME0 302 aa4.66□□□□□ -1.66
RDH11-204ENST00000553578 ABCD1P33897 745 aa4.66□□□□□ -1.66
RDH11-204ENST00000553578 C20orf194Q5TEA3 1177 aa4.66□□□□□ -1.66
RDH11-204ENST00000553578 CAPN12Q6ZSI9 719 aa4.66□□□□□ -1.66
RDH11-204ENST00000553578 KRT222Q8N1A0 295 aa4.66□□□□□ -1.66
RDH11-204ENST00000553578 TSEN2Q8NCE0 465 aaKnown RBP4.66□□□□□ -1.66
RDH11-204ENST00000553578 C8orf37Q96NL8 207 aa4.66□□□□□ -1.66
RDH11-204ENST00000553578 CWC15Q9P013 229 aaKnown RBP4.66□□□□□ -1.66
RDH11-204ENST00000553578 COL24A1Q17RW2 1714 aa4.66□□□□□ -1.66
RDH11-204ENST00000553578 TMCO5BA8MYB1 307 aa4.66□□□□□ -1.66
RDH11-204ENST00000553578 GPR37L1O60883 481 aa4.66□□□□□ -1.66
RDH11-204ENST00000553578 BMP1P13497 986 aa4.66□□□□□ -1.66
RDH11-204ENST00000553578 FKBP4Q02790 459 aaKnown RBP eCLIP4.66□□□□□ -1.66
RDH11-204ENST00000553578 MRPL14Q6P1L8 145 aaKnown RBP4.66□□□□□ -1.66
RDH11-204ENST00000553578 KRBA2Q6ZNG9 492 aa4.66□□□□□ -1.66
RDH11-204ENST00000553578 ERCC4Q92889 916 aaPredicted RBP4.66□□□□□ -1.66
RDH11-204ENST00000553578 DAAM1Q9Y4D1 1078 aa4.66□□□□□ -1.66
RDH11-204ENST00000553578 LY75O60449 1722 aa4.66□□□□□ -1.66
RDH11-204ENST00000553578 KDM6AO15550 1401 aaPredicted RBP4.66□□□□□ -1.66
RDH11-204ENST00000553578 GADD45BO75293 160 aaPredicted RBP4.66□□□□□ -1.66
RDH11-204ENST00000553578 EIF3JO75822 258 aaKnown RBP4.66□□□□□ -1.66
RDH11-204ENST00000553578 SSFA2P28290 1259 aa4.66□□□□□ -1.66
RDH11-204ENST00000553578 ATP1A2P50993 1020 aa4.66□□□□□ -1.66
RDH11-204ENST00000553578 GTF2IP78347 998 aa4.66□□□□□ -1.66
RDH11-204ENST00000553578 RELBQ01201 579 aa4.66□□□□□ -1.66
RDH11-204ENST00000553578 PLCB3Q01970 1234 aa4.66□□□□□ -1.66
RDH11-204ENST00000553578 LONRF3Q496Y0 759 aa4.66□□□□□ -1.66
RDH11-204ENST00000553578 ZNF784Q8NCA9 323 aaPredicted RBP4.66□□□□□ -1.66
RDH11-204ENST00000553578 AIDAQ96BJ3 306 aa4.66□□□□□ -1.66
RDH11-204ENST00000553578 OSBPL3Q9H4L5 887 aa4.66□□□□□ -1.66
RDH11-204ENST00000553578 QTRT2Q9H974 415 aaKnown RBP4.66□□□□□ -1.66
RDH11-204ENST00000553578 MAGEC2Q9UBF1 373 aaPredicted RBP4.66□□□□□ -1.66
RDH11-204ENST00000553578 CCDC39Q9UFE4 941 aa4.66□□□□□ -1.66
RDH11-204ENST00000553578 ZMIZ1Q9ULJ6 1067 aa4.66□□□□□ -1.66
RDH11-204ENST00000553578 SYNPO2Q9UMS6 1093 aa4.66□□□□□ -1.66
RDH11-204ENST00000553578 KLHL33A6NCF5 533 aa4.65□□□□□ -1.66
RDH11-204ENST00000553578 PRKAR2BP31323 418 aa4.65□□□□□ -1.66
RDH11-204ENST00000553578 USP4Q13107 963 aa4.65□□□□□ -1.66
RDH11-204ENST00000553578 CBLBQ13191 982 aa4.65□□□□□ -1.66
RDH11-204ENST00000553578 ZKSCAN2Q63HK3 967 aa4.65□□□□□ -1.66
RDH11-204ENST00000553578 ARL10Q8N8L6 244 aa4.65□□□□□ -1.66
RDH11-204ENST00000553578 GIMAP7Q8NHV1 300 aa4.65□□□□□ -1.66
RDH11-204ENST00000553578 SETDB2Q96T68 719 aa4.65□□□□□ -1.66
RDH11-204ENST00000553578 MBIPQ9NS73 344 aa4.65□□□□□ -1.66
RDH11-204ENST00000553578 DDX19BQ9UMR2 479 aa4.65□□□□□ -1.66
RDH11-204ENST00000553578 RAD50Q92878 1312 aa4.65□□□□□ -1.66
RDH11-204ENST00000553578 USP42Q9H9J4 1324 aaKnown RBP4.65□□□□□ -1.66
RDH11-204ENST00000553578 MYBP10242 640 aa4.65□□□□□ -1.67
RDH11-204ENST00000553578 RLBP1P12271 317 aa4.65□□□□□ -1.67
RDH11-204ENST00000553578 TRIM27P14373 513 aa4.65□□□□□ -1.67
RDH11-204ENST00000553578 SEC13P55735 322 aa4.65□□□□□ -1.67
RDH11-204ENST00000553578 NOLC1Q14978 699 aaKnown RBP eCLIP4.65□□□□□ -1.679e-7■□□□□ 9.1
RDH11-204ENST00000553578 CDC37Q16543 378 aaPredicted RBP4.65□□□□□ -1.67
RDH11-204ENST00000553578 LRP10Q7Z4F1 713 aa4.65□□□□□ -1.67
RDH11-204ENST00000553578 GAS2L3Q86XJ1 694 aa4.65□□□□□ -1.67
RDH11-204ENST00000553578 NPAS4Q8IUM7 802 aa4.65□□□□□ -1.67
RDH11-204ENST00000553578 PURBQ96QR8 312 aaKnown RBP4.65□□□□□ -1.67
RDH11-204ENST00000553578 PPP1R9BQ96SB3 815 aa4.65□□□□□ -1.67
RDH11-204ENST00000553578 SENP7Q9BQF6 1050 aa4.65□□□□□ -1.67
RDH11-204ENST00000553578 SMC3Q9UQE7 1217 aa4.65□□□□□ -1.67
RDH11-204ENST00000553578 FAN1Q9Y2M0 1017 aa4.65□□□□□ -1.67
RDH11-204ENST00000553578 TLDC2A0PJX2 215 aa4.65□□□□□ -1.67
RDH11-204ENST00000553578 TMEM88BA6NKF7 163 aa4.65□□□□□ -1.67
RDH11-204ENST00000553578 MYO1CO00159 1063 aa4.65□□□□□ -1.67
RDH11-204ENST00000553578 IRS4O14654 1257 aaPredicted RBP4.65□□□□□ -1.67
RDH11-204ENST00000553578 MAN1A2O60476 641 aa4.65□□□□□ -1.67
RDH11-204ENST00000553578 BCAR3O75815 825 aa4.65□□□□□ -1.67
RDH11-204ENST00000553578 AMOTQ4VCS5 1084 aa4.65□□□□□ -1.67
RDH11-204ENST00000553578 JAKMIP3Q5VZ66 844 aa4.65□□□□□ -1.67
RDH11-204ENST00000553578 NAIF1Q69YI7 327 aaPredicted RBP4.65□□□□□ -1.67
RDH11-204ENST00000553578 ZNF280DQ6N043 979 aa4.65□□□□□ -1.67
RDH11-204ENST00000553578 CYP2U1Q7Z449 544 aa4.65□□□□□ -1.67
RDH11-204ENST00000553578 JAZF1Q86VZ6 243 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms