RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 DDX60LQ5H9U9 1706 aaKnown RBP14.43□□□□□ -0.1
SRP54-203ENST00000553544 MAST2Q6P0Q8 1798 aa14.42□□□□□ -0.1
SRP54-203ENST00000553544 USP17L15C9J2P7 530 aa14.42□□□□□ -0.1
SRP54-203ENST00000553544 USP17L13C9JLJ4 530 aa14.42□□□□□ -0.1
SRP54-203ENST00000553544 USP17L11C9JVI0 530 aa14.42□□□□□ -0.1
SRP54-203ENST00000553544 USP17L18D6R9N7 530 aa14.42□□□□□ -0.1
SRP54-203ENST00000553544 USP17L22D6RA61 530 aa14.42□□□□□ -0.1
SRP54-203ENST00000553544 USP17L17D6RBQ6 530 aa14.42□□□□□ -0.1
SRP54-203ENST00000553544 USP17L19D6RCP7 530 aa14.42□□□□□ -0.1
SRP54-203ENST00000553544 USP17L20D6RJB6 530 aa14.42□□□□□ -0.1
SRP54-203ENST00000553544 GDF11O95390 407 aa14.42□□□□□ -0.1
SRP54-203ENST00000553544 CNGA1P29973 690 aa14.42□□□□□ -0.1
SRP54-203ENST00000553544 ATN1P54259 1190 aaPredicted RBP14.42□□□□□ -0.1
SRP54-203ENST00000553544 USP17L24Q0WX57 530 aa14.42□□□□□ -0.1
SRP54-203ENST00000553544 MAPKAPK5Q8IW41 473 aa14.42□□□□□ -0.1
SRP54-203ENST00000553544 LPAR1Q92633 364 aa14.42□□□□□ -0.1
SRP54-203ENST00000553544 DDX20Q9UHI6 824 aaKnown RBP14.42□□□□□ -0.1
SRP54-203ENST00000553544 PALD1Q9ULE6 856 aa14.42□□□□□ -0.1
SRP54-203ENST00000553544 ZBTB21Q9ULJ3 1066 aa14.42□□□□□ -0.1
SRP54-203ENST00000553544 SLC15A5A6NIM6 579 aa14.41□□□□□ -0.1
SRP54-203ENST00000553544 PTPREP23469 700 aa14.41□□□□□ -0.1
SRP54-203ENST00000553544 MCAMP43121 646 aa14.41□□□□□ -0.1
SRP54-203ENST00000553544 WDR78Q5VTH9 848 aa14.41□□□□□ -0.1
SRP54-203ENST00000553544 POTEEQ6S8J3 1075 aa14.41□□□□□ -0.1
SRP54-203ENST00000553544 ARRDC4Q8NCT1 418 aa14.41□□□□□ -0.1
SRP54-203ENST00000553544 CDX2Q99626 313 aaPredicted RBP14.41□□□□□ -0.1
SRP54-203ENST00000553544 SEMA6BQ9H3T3 888 aa14.41□□□□□ -0.1
SRP54-203ENST00000553544 ZBTB40Q9NUA8 1239 aa14.41□□□□□ -0.1
SRP54-203ENST00000553544 COG6Q9Y2V7 657 aa14.41□□□□□ -0.1
SRP54-203ENST00000553544 LOC285556D6RIA3 1793 aa14.4□□□□□ -0.1
SRP54-203ENST00000553544 DNM1LO00429 736 aa14.4□□□□□ -0.1
SRP54-203ENST00000553544 HLA-DOAP06340 250 aa14.4□□□□□ -0.1
SRP54-203ENST00000553544 OS9Q13438 667 aaPredicted RBP14.4□□□□□ -0.1
SRP54-203ENST00000553544 ZNF512BQ96KM6 892 aaPredicted RBP14.4□□□□□ -0.1
SRP54-203ENST00000553544 DBNDD2Q9BQY9 259 aa14.4□□□□□ -0.1
SRP54-203ENST00000553544 DNAJC18Q9H819 358 aa14.4□□□□□ -0.1
SRP54-203ENST00000553544 FLRT1Q9NZU1 646 aa14.4□□□□□ -0.1
SRP54-203ENST00000553544 DDX19BQ9UMR2 479 aa14.4□□□□□ -0.1
SRP54-203ENST00000553544 NDUFB9Q9Y6M9 179 aa14.4□□□□□ -0.1
SRP54-203ENST00000553544 IVNS1ABPQ9Y6Y0 642 aa14.4□□□□□ -0.1
SRP54-203ENST00000553544 FOCADQ5VW36 1801 aa14.4□□□□□ -0.1
SRP54-203ENST00000553544 FLT1P17948 1338 aa14.4□□□□□ -0.1
SRP54-203ENST00000553544 PLXNB2O15031 1838 aa14.39□□□□□ -0.11
SRP54-203ENST00000553544 IGSF3O75054 1194 aa14.39□□□□□ -0.11
SRP54-203ENST00000553544 GH2P01242 217 aa14.39□□□□□ -0.11
SRP54-203ENST00000553544 HOXC6P09630 235 aa14.39□□□□□ -0.11
SRP54-203ENST00000553544 USP14P54578 494 aa14.39□□□□□ -0.11
SRP54-203ENST00000553544 RTP1P59025 263 aa14.39□□□□□ -0.11
SRP54-203ENST00000553544 SHHQ15465 462 aa14.39□□□□□ -0.11
SRP54-203ENST00000553544 SHROOM1Q2M3G4 852 aaPredicted RBP14.39□□□□□ -0.11
SRP54-203ENST00000553544 CATSPERGQ6ZRH7 1159 aa14.39□□□□□ -0.11
SRP54-203ENST00000553544 RPAP2Q8IXW5 612 aaPredicted RBP14.39□□□□□ -0.11
SRP54-203ENST00000553544 EAF2Q96CJ1 260 aaPredicted RBP14.39□□□□□ -0.11
SRP54-203ENST00000553544 SNRKQ9NRH2 765 aa14.39□□□□□ -0.11
SRP54-203ENST00000553544 DBNLQ9UJU6 430 aaKnown RBP14.39□□□□□ -0.11
SRP54-203ENST00000553544 VCANP13611 3396 aa14.39□□□□□ -0.11
SRP54-203ENST00000553544 CNMDO75829 334 aa14.38□□□□□ -0.11
SRP54-203ENST00000553544 CCDC158Q5M9N0 1113 aa14.38□□□□□ -0.11
SRP54-203ENST00000553544 DPP9Q86TI2 863 aa14.38□□□□□ -0.11
SRP54-203ENST00000553544 SIRT2Q8IXJ6 389 aa14.38□□□□□ -0.11
SRP54-203ENST00000553544 MAFAQ8NHW3 353 aaPredicted RBP14.38□□□□□ -0.11
SRP54-203ENST00000553544 C12orf42Q96LP6 360 aa14.38□□□□□ -0.11
SRP54-203ENST00000553544 FEZ1Q99689 392 aa14.38□□□□□ -0.11
SRP54-203ENST00000553544 SAP30BPQ9UHR5 308 aaKnown RBP14.38□□□□□ -0.11
SRP54-203ENST00000553544 EXOC6BQ9Y2D4 811 aa14.38□□□□□ -0.11
SRP54-203ENST00000553544 ATP11BQ9Y2G3 1177 aa14.38□□□□□ -0.11
SRP54-203ENST00000553544 STRNO43815 780 aa14.37□□□□□ -0.11
SRP54-203ENST00000553544 CYP2C19P33261 490 aa14.37□□□□□ -0.11
SRP54-203ENST00000553544 ZYXQ15942 572 aaKnown RBP14.37□□□□□ -0.11
SRP54-203ENST00000553544 TTC39AQ5SRH9 613 aa14.37□□□□□ -0.11
SRP54-203ENST00000553544 GJC2Q5T442 439 aaPredicted RBP14.37□□□□□ -0.11
SRP54-203ENST00000553544 C20orf194Q5TEA3 1177 aa14.37□□□□□ -0.11
SRP54-203ENST00000553544 TATDN1Q6P1N9 297 aa14.37□□□□□ -0.11
SRP54-203ENST00000553544 LBX2Q6XYB7 198 aa14.37□□□□□ -0.11
SRP54-203ENST00000553544 SLC39A5Q6ZMH5 540 aa14.37□□□□□ -0.11
SRP54-203ENST00000553544 CCDC8Q9H0W5 538 aaPredicted RBP14.37□□□□□ -0.11
SRP54-203ENST00000553544 PRDM6Q9NQX0 595 aa14.37□□□□□ -0.11
SRP54-203ENST00000553544 TLR7Q9NYK1 1049 aaKnown RBP14.37□□□□□ -0.11
SRP54-203ENST00000553544 CYP2E1P05181 493 aaPredicted RBP14.36□□□□□ -0.11
SRP54-203ENST00000553544 SMAD3P84022 425 aaKnown RBP14.36□□□□□ -0.11
SRP54-203ENST00000553544 GRB14Q14449 540 aa14.36□□□□□ -0.11
SRP54-203ENST00000553544 RAB3GAP1Q15042 981 aa14.36□□□□□ -0.11
SRP54-203ENST00000553544 ADGRA1Q86SQ6 560 aa14.36□□□□□ -0.11
SRP54-203ENST00000553544 ERC1Q8IUD2 1116 aa14.36□□□□□ -0.11
SRP54-203ENST00000553544 TRPV1Q8NER1 839 aa14.36□□□□□ -0.11
SRP54-203ENST00000553544 NPLOC4Q8TAT6 608 aa14.36□□□□□ -0.11
SRP54-203ENST00000553544 SYMPKQ92797 1274 aaKnown RBP14.36□□□□□ -0.11
SRP54-203ENST00000553544 KIAA1683Q9H0B3 1180 aa14.36□□□□□ -0.11
SRP54-203ENST00000553544 CHMP4BQ9H444 224 aaKnown RBP14.36□□□□□ -0.11
SRP54-203ENST00000553544 CABP5Q9NP86 173 aa14.36□□□□□ -0.11
SRP54-203ENST00000553544 HOXC10Q9NYD6 342 aa14.36□□□□□ -0.11
SRP54-203ENST00000553544 PRUNE2Q8WUY3 3088 aa14.36□□□□□ -0.11
SRP54-203ENST00000553544 ATAD5Q96QE3 1844 aa14.36□□□□□ -0.11
SRP54-203ENST00000553544 KBTBD13C9JR72 458 aa14.35□□□□□ -0.11
SRP54-203ENST00000553544 CERKLQ49MI3 558 aaPredicted RBP14.35□□□□□ -0.11
SRP54-203ENST00000553544 HSP90AB4PQ58FF6 505 aa14.35□□□□□ -0.11
SRP54-203ENST00000553544 C9orf50Q5SZB4 431 aa14.35□□□□□ -0.11
SRP54-203ENST00000553544 TTC6Q86TZ1 520 aa14.35□□□□□ -0.11
SRP54-203ENST00000553544 CERS3Q8IU89 383 aa14.35□□□□□ -0.11
SRP54-203ENST00000553544 RHPN1Q8TCX5 695 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms