RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 ADGRA2Q96PE1 1338 aa9.25□□□□□ -0.93
ATXN3-219ENST00000553488 PHIPQ8WWQ0 1821 aa9.24□□□□□ -0.93
ATXN3-219ENST00000553488 TCP10L2B9ZVM9 353 aa9.24□□□□□ -0.93
ATXN3-219ENST00000553488 BTBD19C9JJ37 291 aa9.24□□□□□ -0.93
ATXN3-219ENST00000553488 GPR37L1O60883 481 aa9.24□□□□□ -0.93
ATXN3-219ENST00000553488 MYCP01106 439 aaPredicted RBP9.24□□□□□ -0.93
ATXN3-219ENST00000553488 CRKP46108 304 aa9.24□□□□□ -0.93
ATXN3-219ENST00000553488 GYG1P46976 350 aa9.24□□□□□ -0.93
ATXN3-219ENST00000553488 ARHGEF6Q15052 776 aa9.24□□□□□ -0.93
ATXN3-219ENST00000553488 GRIK5Q16478 980 aa9.24□□□□□ -0.93
ATXN3-219ENST00000553488 SLC4A8Q2Y0W8 1093 aa9.24□□□□□ -0.93
ATXN3-219ENST00000553488 BEND3Q5T5X7 828 aa9.24□□□□□ -0.93
ATXN3-219ENST00000553488 LMBR1LQ6UX01 489 aa9.24□□□□□ -0.93
ATXN3-219ENST00000553488 UBE2Q1Q7Z7E8 422 aa9.24□□□□□ -0.93
ATXN3-219ENST00000553488 CSADQ9Y600 493 aa9.24□□□□□ -0.93
ATXN3-219ENST00000553488 WASF2Q9Y6W5 498 aa9.24□□□□□ -0.93
ATXN3-219ENST00000553488 FANCIQ9NVI1 1328 aa9.24□□□□□ -0.93
ATXN3-219ENST00000553488 DNAH12Q6ZR08 3092 aa9.23□□□□□ -0.93
ATXN3-219ENST00000553488 EYSQ5T1H1 3165 aa9.23□□□□□ -0.93
ATXN3-219ENST00000553488 GNRH1P01148 92 aa9.23□□□□□ -0.93
ATXN3-219ENST00000553488 NNTQ13423 1086 aa9.23□□□□□ -0.93
ATXN3-219ENST00000553488 UBE4AQ14139 1066 aa9.23□□□□□ -0.93
ATXN3-219ENST00000553488 AGERQ15109 404 aa9.23□□□□□ -0.93
ATXN3-219ENST00000553488 MTFR1Q15390 333 aa9.23□□□□□ -0.93
ATXN3-219ENST00000553488 WWC1Q8IX03 1113 aa9.23□□□□□ -0.93
ATXN3-219ENST00000553488 FAM84BQ96KN1 310 aaPredicted RBP9.23□□□□□ -0.93
ATXN3-219ENST00000553488 CHMP3Q9Y3E7 222 aa9.23□□□□□ -0.93
ATXN3-219ENST00000553488 IL16Q14005 1332 aa9.23□□□□□ -0.93
ATXN3-219ENST00000553488 VCANP13611 3396 aa9.22□□□□□ -0.93
ATXN3-219ENST00000553488 DOCK1Q14185 1865 aa9.22□□□□□ -0.93
ATXN3-219ENST00000553488 F6X3S4 739 aa9.22□□□□□ -0.93
ATXN3-219ENST00000553488 NR3C2P08235 984 aa9.22□□□□□ -0.93
ATXN3-219ENST00000553488 CETPP11597 493 aa9.22□□□□□ -0.93
ATXN3-219ENST00000553488 HIBADHP31937 336 aaKnown RBP9.22□□□□□ -0.93
ATXN3-219ENST00000553488 TNNI2P48788 182 aa9.22□□□□□ -0.93
ATXN3-219ENST00000553488 CACNB3P54284 484 aa9.22□□□□□ -0.93
ATXN3-219ENST00000553488 PRMT2P55345 433 aa9.22□□□□□ -0.93
ATXN3-219ENST00000553488 NR5A1Q13285 461 aa9.22□□□□□ -0.93
ATXN3-219ENST00000553488 PPIL2Q13356 520 aa9.22□□□□□ -0.93
ATXN3-219ENST00000553488 ZNF787Q6DD87 383 aa9.22□□□□□ -0.93
ATXN3-219ENST00000553488 C17orf99Q6UX52 265 aa9.22□□□□□ -0.93
ATXN3-219ENST00000553488 LDHAL6AQ6ZMR3 332 aa9.22□□□□□ -0.93
ATXN3-219ENST00000553488 ERO1BQ86YB8 467 aa9.22□□□□□ -0.93
ATXN3-219ENST00000553488 ZKSCAN4Q969J2 545 aaPredicted RBP9.22□□□□□ -0.93
ATXN3-219ENST00000553488 WRNIP1Q96S55 665 aa9.22□□□□□ -0.93
ATXN3-219ENST00000553488 ARHGAP9Q9BRR9 750 aa9.22□□□□□ -0.93
ATXN3-219ENST00000553488 MAGEB6P1A0A0J9YX57 407 aa9.21□□□□□ -0.94
ATXN3-219ENST00000553488 GRM8O00222 908 aa9.21□□□□□ -0.94
ATXN3-219ENST00000553488 PLIN1O60240 522 aa9.21□□□□□ -0.94
ATXN3-219ENST00000553488 VAMP4O75379 141 aa9.21□□□□□ -0.94
ATXN3-219ENST00000553488 HDLBPQ00341 1268 aaKnown RBP9.21□□□□□ -0.94
ATXN3-219ENST00000553488 SNAPC2Q13487 334 aa9.21□□□□□ -0.94
ATXN3-219ENST00000553488 MOGSQ13724 837 aa9.21□□□□□ -0.94
ATXN3-219ENST00000553488 CCDC57Q2TAC2 916 aa9.21□□□□□ -0.94
ATXN3-219ENST00000553488 FAM83AQ86UY5 434 aa9.21□□□□□ -0.94
ATXN3-219ENST00000553488 KAZALD1Q96I82 304 aa9.21□□□□□ -0.94
ATXN3-219ENST00000553488 TRIM47Q96LD4 638 aa9.21□□□□□ -0.94
ATXN3-219ENST00000553488 PUS3Q9BZE2 481 aaKnown RBP9.21□□□□□ -0.94
ATXN3-219ENST00000553488 ATP13A2Q9NQ11 1180 aa9.21□□□□□ -0.94
ATXN3-219ENST00000553488 CNNM1Q9NRU3 951 aa9.21□□□□□ -0.94
ATXN3-219ENST00000553488 SRRDQ9UH36 339 aa9.21□□□□□ -0.94
ATXN3-219ENST00000553488 TIMP2P16035 220 aa9.2□□□□□ -0.94
ATXN3-219ENST00000553488 GJA8P48165 433 aa9.2□□□□□ -0.94
ATXN3-219ENST00000553488 PTK2Q05397 1052 aa9.2□□□□□ -0.94
ATXN3-219ENST00000553488 KIF22Q14807 665 aa9.2□□□□□ -0.94
ATXN3-219ENST00000553488 CCDC184Q52MB2 194 aa9.2□□□□□ -0.94
ATXN3-219ENST00000553488 TAF7LQ5H9L4 462 aa9.2□□□□□ -0.94
ATXN3-219ENST00000553488 FKBP1CQ5VVH2 108 aa9.2□□□□□ -0.94
ATXN3-219ENST00000553488 APOBEC3HQ6NTF7 200 aaKnown RBP9.2□□□□□ -0.94
ATXN3-219ENST00000553488 FBXO33Q7Z6M2 555 aa9.2□□□□□ -0.94
ATXN3-219ENST00000553488 ANKRD23Q86SG2 305 aa9.2□□□□□ -0.94
ATXN3-219ENST00000553488 VGLL2Q8N8G2 317 aa9.2□□□□□ -0.94
ATXN3-219ENST00000553488 ZDHHC15Q96MV8 337 aa9.2□□□□□ -0.94
ATXN3-219ENST00000553488 SNRKQ9NRH2 765 aa9.2□□□□□ -0.94
ATXN3-219ENST00000553488 IQSEC3Q9UPP2 1182 aaPredicted RBP9.2□□□□□ -0.94
ATXN3-219ENST00000553488 KCNH4Q9UQ05 1017 aa9.2□□□□□ -0.94
ATXN3-219ENST00000553488 RIPOR2Q9Y4F9 1068 aa9.2□□□□□ -0.94
ATXN3-219ENST00000553488 MYH2Q9UKX2 1941 aa9.2□□□□□ -0.94
ATXN3-219ENST00000553488 PRUNE2Q8WUY3 3088 aa9.2□□□□□ -0.94
ATXN3-219ENST00000553488 LOC285556D6RIA3 1793 aa9.19□□□□□ -0.94
ATXN3-219ENST00000553488 GJB1P08034 283 aa9.19□□□□□ -0.94
ATXN3-219ENST00000553488 INPP5BP32019 993 aa9.19□□□□□ -0.94
ATXN3-219ENST00000553488 GRK4P32298 578 aa9.19□□□□□ -0.94
ATXN3-219ENST00000553488 PSMC4P43686 418 aa9.19□□□□□ -0.94
ATXN3-219ENST00000553488 PPATQ06203 517 aa9.19□□□□□ -0.94
ATXN3-219ENST00000553488 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.19□□□□□ -0.94
ATXN3-219ENST00000553488 TBC1D22AQ8WUA7 517 aa9.19□□□□□ -0.94
ATXN3-219ENST00000553488 TEKT1Q969V4 418 aa9.19□□□□□ -0.94
ATXN3-219ENST00000553488 SUCLG2Q96I99 432 aa9.19□□□□□ -0.94
ATXN3-219ENST00000553488 GMPR2Q9P2T1 348 aaKnown RBP9.19□□□□□ -0.94
ATXN3-219ENST00000553488 CPA4Q9UI42 421 aa9.19□□□□□ -0.94
ATXN3-219ENST00000553488 MYPNQ86TC9 1320 aa9.19□□□□□ -0.94
ATXN3-219ENST00000553488 ATRNL1Q5VV63 1379 aa9.19□□□□□ -0.94
ATXN3-219ENST00000553488 ATAD5Q96QE3 1844 aa9.19□□□□□ -0.94
ATXN3-219ENST00000553488 SPTBN5Q9NRC6 3674 aaKnown RBP9.18□□□□□ -0.94
ATXN3-219ENST00000553488 PDHXO00330 501 aa9.18□□□□□ -0.94
ATXN3-219ENST00000553488 UTYO14607 1347 aa9.18□□□□□ -0.94
ATXN3-219ENST00000553488 PLXNB2O15031 1838 aa9.18□□□□□ -0.94
ATXN3-219ENST00000553488 ZBTB7BO15156 539 aaPredicted RBP9.18□□□□□ -0.94
ATXN3-219ENST00000553488 CAPN5O15484 640 aaPredicted RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms