RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 GPRC5AQ8NFJ5 357 aa12.07□□□□□ -0.48
ACTN1-208ENST00000553370 GTF3C2Q8WUA4 911 aaPredicted RBP12.07□□□□□ -0.48
ACTN1-208ENST00000553370 SOCS4Q8WXH5 440 aa12.07□□□□□ -0.48
ACTN1-208ENST00000553370 PAWRQ96IZ0 340 aaKnown RBP12.07□□□□□ -0.48
ACTN1-208ENST00000553370 NUDT12Q9BQG2 462 aa12.07□□□□□ -0.48
ACTN1-208ENST00000553370 WDR18Q9BV38 432 aa12.07□□□□□ -0.48
ACTN1-208ENST00000553370 CCDC8Q9H0W5 538 aaPredicted RBP12.07□□□□□ -0.48
ACTN1-208ENST00000553370 GINM1Q9NU53 330 aa12.07□□□□□ -0.48
ACTN1-208ENST00000553370 RBM27Q9P2N5 1060 aaKnown RBP12.07□□□□□ -0.48
ACTN1-208ENST00000553370 ZNFX1Q9P2E3 1918 aaKnown RBP12.06□□□□□ -0.48
ACTN1-208ENST00000553370 ZBTB7BO15156 539 aaPredicted RBP12.06□□□□□ -0.48
ACTN1-208ENST00000553370 CYP2E1P05181 493 aaPredicted RBP12.06□□□□□ -0.48
ACTN1-208ENST00000553370 ZKSCAN1P17029 563 aaPredicted RBP12.06□□□□□ -0.48
ACTN1-208ENST00000553370 HERVK_113P62684 666 aa12.06□□□□□ -0.48
ACTN1-208ENST00000553370 DYNLL1P63167 89 aaKnown RBP12.06□□□□□ -0.48
ACTN1-208ENST00000553370 MAP3K12Q12852 859 aa12.06□□□□□ -0.48
ACTN1-208ENST00000553370 SH3D19Q5HYK7 790 aa12.06□□□□□ -0.48
ACTN1-208ENST00000553370 SMYD5Q6GMV2 418 aa12.06□□□□□ -0.48
ACTN1-208ENST00000553370 AACSQ86V21 672 aa12.06□□□□□ -0.48
ACTN1-208ENST00000553370 ERC1Q8IUD2 1116 aa12.06□□□□□ -0.48
ACTN1-208ENST00000553370 FOXP4Q8IVH2 680 aaPredicted RBP12.06□□□□□ -0.48
ACTN1-208ENST00000553370 C7orf61Q8IZ16 206 aa12.06□□□□□ -0.48
ACTN1-208ENST00000553370 MAGEB6Q8N7X4 407 aa12.06□□□□□ -0.48
ACTN1-208ENST00000553370 SSH3Q8TE77 659 aa12.06□□□□□ -0.48
ACTN1-208ENST00000553370 PIH1D3Q9NQM4 214 aaKnown RBP12.06□□□□□ -0.48
ACTN1-208ENST00000553370 PAK6Q9NQU5 681 aaPredicted RBP12.06□□□□□ -0.48
ACTN1-208ENST00000553370 SZT2Q5T011 3432 aa12.05□□□□□ -0.48
ACTN1-208ENST00000553370 GLRX3O76003 335 aaKnown RBP12.05□□□□□ -0.48
ACTN1-208ENST00000553370 GH2P01242 217 aa12.05□□□□□ -0.48
ACTN1-208ENST00000553370 MAPK4P31152 587 aa12.05□□□□□ -0.48
ACTN1-208ENST00000553370 PPP4CP60510 307 aa12.05□□□□□ -0.48
ACTN1-208ENST00000553370 RRP1BQ14684 758 aaKnown RBP12.05□□□□□ -0.48
ACTN1-208ENST00000553370 RAB3GAP1Q15042 981 aa12.05□□□□□ -0.48
ACTN1-208ENST00000553370 USP17L2Q6R6M4 530 aa12.05□□□□□ -0.48
ACTN1-208ENST00000553370 UBE2Q1Q7Z7E8 422 aa12.05□□□□□ -0.48
ACTN1-208ENST00000553370 ADGRA1Q86SQ6 560 aa12.05□□□□□ -0.48
ACTN1-208ENST00000553370 ANKLE1Q8NAG6 615 aa12.05□□□□□ -0.48
ACTN1-208ENST00000553370 CABP5Q9NP86 173 aa12.05□□□□□ -0.48
ACTN1-208ENST00000553370 TLR7Q9NYK1 1049 aaKnown RBP12.05□□□□□ -0.48
ACTN1-208ENST00000553370 DBNLQ9UJU6 430 aaKnown RBP12.05□□□□□ -0.48
ACTN1-208ENST00000553370 DNAH12Q6ZR08 3092 aa12.05□□□□□ -0.48
ACTN1-208ENST00000553370 RPTORQ8N122 1335 aa12.05□□□□□ -0.48
ACTN1-208ENST00000553370 APBB1O00213 710 aa12.04□□□□□ -0.48
ACTN1-208ENST00000553370 IGSF3O75054 1194 aa12.04□□□□□ -0.48
ACTN1-208ENST00000553370 POLR3DP05423 398 aaPredicted RBP12.04□□□□□ -0.48
ACTN1-208ENST00000553370 RGS2P41220 211 aa12.04□□□□□ -0.48
ACTN1-208ENST00000553370 USP14P54578 494 aa12.04□□□□□ -0.48
ACTN1-208ENST00000553370 CCNA1P78396 465 aa12.04□□□□□ -0.48
ACTN1-208ENST00000553370 TTC6Q86TZ1 520 aa12.04□□□□□ -0.48
ACTN1-208ENST00000553370 TRMT44Q8IYL2 757 aaKnown RBP12.04□□□□□ -0.48
ACTN1-208ENST00000553370 DIS3LQ8TF46 1054 aaKnown RBP12.04□□□□□ -0.48
ACTN1-208ENST00000553370 ZNF512BQ96KM6 892 aaPredicted RBP12.04□□□□□ -0.48
ACTN1-208ENST00000553370 P2RX7Q99572 595 aaKnown RBP12.04□□□□□ -0.48
ACTN1-208ENST00000553370 NBPF3Q9H094 633 aa12.04□□□□□ -0.48
ACTN1-208ENST00000553370 MORF4L1Q9UBU8 362 aa12.04□□□□□ -0.48
ACTN1-208ENST00000553370 SERPINB13Q9UIV8 391 aa12.04□□□□□ -0.48
ACTN1-208ENST00000553370 EXOC6BQ9Y2D4 811 aa12.04□□□□□ -0.48
ACTN1-208ENST00000553370 IVNS1ABPQ9Y6Y0 642 aa12.04□□□□□ -0.48
ACTN1-208ENST00000553370 COL11A1P12107 1806 aaPredicted RBP12.03□□□□□ -0.48
ACTN1-208ENST00000553370 MPHOSPH10O00566 681 aaKnown RBP12.03□□□□□ -0.48
ACTN1-208ENST00000553370 HOXA7P31268 230 aaPredicted RBP12.03□□□□□ -0.48
ACTN1-208ENST00000553370 ERVK-9P63128 1117 aa12.03□□□□□ -0.48
ACTN1-208ENST00000553370 ERVK-24P63145 666 aa12.03□□□□□ -0.48
ACTN1-208ENST00000553370 MFSD10Q14728 455 aa12.03□□□□□ -0.48
ACTN1-208ENST00000553370 ABCB5Q2M3G0 1257 aa12.03□□□□□ -0.48
ACTN1-208ENST00000553370 SHROOM1Q2M3G4 852 aaPredicted RBP12.03□□□□□ -0.48
ACTN1-208ENST00000553370 CERKLQ49MI3 558 aaPredicted RBP12.03□□□□□ -0.48
ACTN1-208ENST00000553370 HSP90AB4PQ58FF6 505 aa12.03□□□□□ -0.48
ACTN1-208ENST00000553370 PLEKHH3Q7Z736 793 aa12.03□□□□□ -0.48
ACTN1-208ENST00000553370 TRIB2Q92519 343 aa12.03□□□□□ -0.48
ACTN1-208ENST00000553370 CRISPLD2Q9H0B8 497 aa12.03□□□□□ -0.48
ACTN1-208ENST00000553370 C11orf49Q9H6J7 331 aa12.03□□□□□ -0.48
ACTN1-208ENST00000553370 DNAJC18Q9H819 358 aa12.03□□□□□ -0.48
ACTN1-208ENST00000553370 SLC24A3Q9HC58 644 aa12.03□□□□□ -0.48
ACTN1-208ENST00000553370 ZMYND8Q9ULU4 1186 aaPredicted RBP12.03□□□□□ -0.48
ACTN1-208ENST00000553370 NDUFB9Q9Y6M9 179 aa12.03□□□□□ -0.48
ACTN1-208ENST00000553370 PLXNA1Q9UIW2 1896 aa12.03□□□□□ -0.48
ACTN1-208ENST00000553370 CUL9Q8IWT3 2517 aa12.02□□□□□ -0.48
ACTN1-208ENST00000553370 MAGEB6P1A0A0J9YX57 407 aa12.02□□□□□ -0.49
ACTN1-208ENST00000553370 USP17L15C9J2P7 530 aa12.02□□□□□ -0.49
ACTN1-208ENST00000553370 USP17L13C9JLJ4 530 aa12.02□□□□□ -0.49
ACTN1-208ENST00000553370 USP17L11C9JVI0 530 aa12.02□□□□□ -0.49
ACTN1-208ENST00000553370 USP17L18D6R9N7 530 aa12.02□□□□□ -0.49
ACTN1-208ENST00000553370 USP17L22D6RA61 530 aa12.02□□□□□ -0.49
ACTN1-208ENST00000553370 USP17L17D6RBQ6 530 aa12.02□□□□□ -0.49
ACTN1-208ENST00000553370 USP17L19D6RCP7 530 aa12.02□□□□□ -0.49
ACTN1-208ENST00000553370 USP17L20D6RJB6 530 aa12.02□□□□□ -0.49
ACTN1-208ENST00000553370 USP17L24Q0WX57 530 aa12.02□□□□□ -0.49
ACTN1-208ENST00000553370 TRIM32Q13049 653 aa12.02□□□□□ -0.49
ACTN1-208ENST00000553370 TTF1Q15361 905 aaPredicted RBP12.02□□□□□ -0.49
ACTN1-208ENST00000553370 DNAJC2Q99543 621 aaKnown RBP12.02□□□□□ -0.49
ACTN1-208ENST00000553370 APBA2Q99767 749 aa12.02□□□□□ -0.49
ACTN1-208ENST00000553370 CRNKL1Q9BZJ0 848 aaKnown RBP12.02□□□□□ -0.49
ACTN1-208ENST00000553370 A0A1W2PPC1 479 aa12.01□□□□□ -0.49
ACTN1-208ENST00000553370 PEX10O60683 326 aa12.01□□□□□ -0.49
ACTN1-208ENST00000553370 HMMRO75330 724 aa12.01□□□□□ -0.49
ACTN1-208ENST00000553370 IFIT2P09913 472 aaKnown RBP12.01□□□□□ -0.49
ACTN1-208ENST00000553370 MS4A1P11836 297 aa12.01□□□□□ -0.49
ACTN1-208ENST00000553370 MFSD14CQ5VZR4 134 aa12.01□□□□□ -0.49
ACTN1-208ENST00000553370 CEP85Q6P2H3 762 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms