RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 PSMC4P43686 418 aa18.32■□□□□ 0.52
SHMT2-204ENST00000553324 SEPT2Q15019 361 aa18.32■□□□□ 0.52
SHMT2-204ENST00000553324 MCMDC2Q4G0Z9 681 aa18.32■□□□□ 0.52
SHMT2-204ENST00000553324 SLC44A5Q8NCS7 719 aa18.32■□□□□ 0.52
SHMT2-204ENST00000553324 GTF3C2Q8WUA4 911 aaPredicted RBP18.32■□□□□ 0.52
SHMT2-204ENST00000553324 NAPBQ9H115 298 aa18.32■□□□□ 0.52
SHMT2-204ENST00000553324 ASCC2Q9H1I8 757 aaPredicted RBP18.32■□□□□ 0.52
SHMT2-204ENST00000553324 SH2D4AQ9H788 454 aa18.32■□□□□ 0.52
SHMT2-204ENST00000553324 SIPA1L1O43166 1804 aa18.32■□□□□ 0.52
SHMT2-204ENST00000553324 GUCY1A2P33402 732 aa18.31■□□□□ 0.52
SHMT2-204ENST00000553324 FCGRTP55899 365 aa18.31■□□□□ 0.52
SHMT2-204ENST00000553324 EVX2Q03828 476 aa18.31■□□□□ 0.52
SHMT2-204ENST00000553324 NBPF11Q86T75 865 aa18.31■□□□□ 0.52
SHMT2-204ENST00000553324 KANSL2Q9H9L4 492 aa18.31■□□□□ 0.52
SHMT2-204ENST00000553324 ARHGEF10LQ9HCE6 1279 aa18.31■□□□□ 0.52
SHMT2-204ENST00000553324 USP17L15C9J2P7 530 aa18.3■□□□□ 0.52
SHMT2-204ENST00000553324 USP17L13C9JLJ4 530 aa18.3■□□□□ 0.52
SHMT2-204ENST00000553324 USP17L11C9JVI0 530 aa18.3■□□□□ 0.52
SHMT2-204ENST00000553324 USP17L18D6R9N7 530 aa18.3■□□□□ 0.52
SHMT2-204ENST00000553324 USP17L22D6RA61 530 aa18.3■□□□□ 0.52
SHMT2-204ENST00000553324 USP17L17D6RBQ6 530 aa18.3■□□□□ 0.52
SHMT2-204ENST00000553324 USP17L19D6RCP7 530 aa18.3■□□□□ 0.52
SHMT2-204ENST00000553324 USP17L20D6RJB6 530 aa18.3■□□□□ 0.52
SHMT2-204ENST00000553324 HIP1O00291 1037 aa18.3■□□□□ 0.52
SHMT2-204ENST00000553324 MFAP1P55081 439 aaKnown RBP18.3■□□□□ 0.52
SHMT2-204ENST00000553324 USP17L24Q0WX57 530 aa18.3■□□□□ 0.52
SHMT2-204ENST00000553324 FAM110CQ1W6H9 321 aa18.3■□□□□ 0.52
SHMT2-204ENST00000553324 ZNF444Q8N0Y2 327 aaPredicted RBP18.3■□□□□ 0.52
SHMT2-204ENST00000553324 ACER1Q8TDN7 264 aa18.3■□□□□ 0.52
SHMT2-204ENST00000553324 PHIPQ8WWQ0 1821 aa18.29■□□□□ 0.52
SHMT2-204ENST00000553324 AKR1B1P15121 316 aa18.29■□□□□ 0.52
SHMT2-204ENST00000553324 PDE4BQ07343 736 aa18.29■□□□□ 0.52
SHMT2-204ENST00000553324 ANKRD13CQ8N6S4 541 aa18.29■□□□□ 0.52
SHMT2-204ENST00000553324 P2RX7Q99572 595 aaKnown RBP18.29■□□□□ 0.52
SHMT2-204ENST00000553324 EPB41L4AQ9HCS5 686 aaPredicted RBP18.29■□□□□ 0.52
SHMT2-204ENST00000553324 MYH7P12883 1935 aa18.29■□□□□ 0.52
SHMT2-204ENST00000553324 SDSP20132 328 aa18.28■□□□□ 0.52
SHMT2-204ENST00000553324 ICA1Q05084 483 aa18.28■□□□□ 0.52
SHMT2-204ENST00000553324 ZYXQ15942 572 aaKnown RBP18.28■□□□□ 0.52
SHMT2-204ENST00000553324 LPAR1Q92633 364 aa18.28■□□□□ 0.52
SHMT2-204ENST00000553324 TRIM47Q96LD4 638 aa18.28■□□□□ 0.52
SHMT2-204ENST00000553324 ARHGAP39Q9C0H5 1083 aa18.28■□□□□ 0.52
SHMT2-204ENST00000553324 SRRDQ9UH36 339 aa18.28■□□□□ 0.52
SHMT2-204ENST00000553324 TMX2Q9Y320 296 aa18.28■□□□□ 0.52
SHMT2-204ENST00000553324 NAV1Q8NEY1 1877 aa18.27■□□□□ 0.52
SHMT2-204ENST00000553324 DDX60LQ5H9U9 1706 aaKnown RBP18.27■□□□□ 0.52
SHMT2-204ENST00000553324 HERVK_113P62684 666 aa18.27■□□□□ 0.52
SHMT2-204ENST00000553324 CAP1Q01518 475 aa18.27■□□□□ 0.52
SHMT2-204ENST00000553324 ALX1Q15699 326 aa18.27■□□□□ 0.52
SHMT2-204ENST00000553324 CATSPERGQ6ZRH7 1159 aa18.27■□□□□ 0.52
SHMT2-204ENST00000553324 HOXC10Q9NYD6 342 aa18.27■□□□□ 0.52
SHMT2-204ENST00000553324 ROBO3Q96MS0 1386 aa18.27■□□□□ 0.51
SHMT2-204ENST00000553324 A0A1W2PRG0 241 aa18.26■□□□□ 0.51
SHMT2-204ENST00000553324 SMIM22K7EJ46 135 aa18.26■□□□□ 0.51
SHMT2-204ENST00000553324 VCAM1P19320 739 aa18.26■□□□□ 0.51
SHMT2-204ENST00000553324 PPARAQ07869 468 aa18.26■□□□□ 0.51
SHMT2-204ENST00000553324 SLC9C1Q4G0N8 1177 aa18.26■□□□□ 0.51
SHMT2-204ENST00000553324 CCDC129Q6ZRS4 1044 aa18.26■□□□□ 0.51
SHMT2-204ENST00000553324 GPRC5AQ8NFJ5 357 aa18.26■□□□□ 0.51
SHMT2-204ENST00000553324 RAET1EQ8TD07 263 aa18.26■□□□□ 0.51
SHMT2-204ENST00000553324 COA7Q96BR5 231 aa18.26■□□□□ 0.51
SHMT2-204ENST00000553324 FAM227BQ96M60 508 aa18.26■□□□□ 0.51
SHMT2-204ENST00000553324 MORF4L1Q9UBU8 362 aa18.26■□□□□ 0.51
SHMT2-204ENST00000553324 ATAD5Q96QE3 1844 aa18.26■□□□□ 0.51
SHMT2-204ENST00000553324 TNPO2O14787 897 aaKnown RBP18.25■□□□□ 0.51
SHMT2-204ENST00000553324 RASA1P20936 1047 aa18.25■□□□□ 0.51
SHMT2-204ENST00000553324 NMIQ13287 307 aaPredicted RBP18.25■□□□□ 0.51
SHMT2-204ENST00000553324 PPP4R3BQ5MIZ7 849 aa18.25■□□□□ 0.51
SHMT2-204ENST00000553324 SIAH1Q8IUQ4 282 aa18.25■□□□□ 0.51
SHMT2-204ENST00000553324 ARMC5Q96C12 935 aa18.25■□□□□ 0.51
SHMT2-204ENST00000553324 RPAP3Q9H6T3 665 aaPredicted RBP18.25■□□□□ 0.51
SHMT2-204ENST00000553324 DIAPH3Q9NSV4 1193 aa18.25■□□□□ 0.51
SHMT2-204ENST00000553324 PTCH2Q9Y6C5 1203 aa18.25■□□□□ 0.51
SHMT2-204ENST00000553324 A0A0D9SFI3 127 aa18.24■□□□□ 0.51
SHMT2-204ENST00000553324 EEF2P13639 858 aaKnown RBP18.24■□□□□ 0.51
SHMT2-204ENST00000553324 CTGFP29279 349 aa18.24■□□□□ 0.51
SHMT2-204ENST00000553324 RGS19P49795 217 aa18.24■□□□□ 0.51
SHMT2-204ENST00000553324 ATP2B2Q01814 1243 aa18.24■□□□□ 0.51
SHMT2-204ENST00000553324 COG2Q14746 738 aa18.24■□□□□ 0.51
SHMT2-204ENST00000553324 LBX2Q6XYB7 198 aa18.24■□□□□ 0.51
SHMT2-204ENST00000553324 CCAR1Q8IX12 1150 aaKnown RBP18.24■□□□□ 0.51
SHMT2-204ENST00000553324 STK11IPQ8N1F8 1099 aa18.24■□□□□ 0.51
SHMT2-204ENST00000553324 VCPKMTQ9H867 229 aa18.24■□□□□ 0.51
SHMT2-204ENST00000553324 GOPCQ9HD26 462 aa18.24■□□□□ 0.51
SHMT2-204ENST00000553324 NYAP2Q9P242 653 aa18.24■□□□□ 0.51
SHMT2-204ENST00000553324 ANAPC4Q9UJX5 808 aa18.24■□□□□ 0.51
SHMT2-204ENST00000553324 RABGAP1Q9Y3P9 1069 aa18.24■□□□□ 0.51
SHMT2-204ENST00000553324 CCDC171Q6TFL3 1326 aa18.23■□□□□ 0.51
SHMT2-204ENST00000553324 MYPNQ86TC9 1320 aa18.23■□□□□ 0.51
SHMT2-204ENST00000553324 PTPRFP10586 1907 aa18.23■□□□□ 0.51
SHMT2-204ENST00000553324 ECM2O94769 699 aaPredicted RBP18.23■□□□□ 0.51
SHMT2-204ENST00000553324 FGAP02671 866 aa18.23■□□□□ 0.51
SHMT2-204ENST00000553324 HSPD1P10809 573 aaKnown RBP18.23■□□□□ 0.51
SHMT2-204ENST00000553324 PDE4AP27815 886 aa18.23■□□□□ 0.51
SHMT2-204ENST00000553324 RBPJLQ9UBG7 517 aa18.23■□□□□ 0.51
SHMT2-204ENST00000553324 WDR46O15213 610 aaKnown RBP18.22■□□□□ 0.51
SHMT2-204ENST00000553324 TSPY3P0CV98 308 aa18.22■□□□□ 0.51
SHMT2-204ENST00000553324 TSPY8P0CW00 308 aa18.22■□□□□ 0.51
SHMT2-204ENST00000553324 CCNA1P78396 465 aa18.22■□□□□ 0.51
SHMT2-204ENST00000553324 IRF5Q13568 498 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms