RNA–Protein interactions for RNA: ENST00000552374.6

TMEM116-215, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM116, Length 1,408 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-215ENST00000552374 PEX10O60683 326 aa13.09□□□□□ -0.31
TMEM116-215ENST00000552374 IGHDP01880 384 aa13.09□□□□□ -0.31
TMEM116-215ENST00000552374 FAM110CQ1W6H9 321 aa13.09□□□□□ -0.31
TMEM116-215ENST00000552374 COA7Q96BR5 231 aa13.09□□□□□ -0.31
TMEM116-215ENST00000552374 SEC62Q99442 399 aaKnown RBP13.09□□□□□ -0.31
TMEM116-215ENST00000552374 TAOK2Q9UL54 1235 aa13.09□□□□□ -0.31
TMEM116-215ENST00000552374 USP17L15C9J2P7 530 aa13.08□□□□□ -0.32
TMEM116-215ENST00000552374 USP17L13C9JLJ4 530 aa13.08□□□□□ -0.32
TMEM116-215ENST00000552374 USP17L11C9JVI0 530 aa13.08□□□□□ -0.32
TMEM116-215ENST00000552374 USP17L18D6R9N7 530 aa13.08□□□□□ -0.32
TMEM116-215ENST00000552374 USP17L22D6RA61 530 aa13.08□□□□□ -0.32
TMEM116-215ENST00000552374 USP17L17D6RBQ6 530 aa13.08□□□□□ -0.32
TMEM116-215ENST00000552374 USP17L19D6RCP7 530 aa13.08□□□□□ -0.32
TMEM116-215ENST00000552374 USP17L20D6RJB6 530 aa13.08□□□□□ -0.32
TMEM116-215ENST00000552374 AKR1B1P15121 316 aa13.08□□□□□ -0.32
TMEM116-215ENST00000552374 EN2P19622 333 aaPredicted RBP13.08□□□□□ -0.32
TMEM116-215ENST00000552374 GRK4P32298 578 aa13.08□□□□□ -0.32
TMEM116-215ENST00000552374 FLT3LGP49771 235 aa13.08□□□□□ -0.32
TMEM116-215ENST00000552374 PDE1AP54750 535 aa13.08□□□□□ -0.32
TMEM116-215ENST00000552374 HERVK_113P62684 666 aa13.08□□□□□ -0.32
TMEM116-215ENST00000552374 IRX6P78412 446 aaPredicted RBP13.08□□□□□ -0.32
TMEM116-215ENST00000552374 USP17L24Q0WX57 530 aa13.08□□□□□ -0.32
TMEM116-215ENST00000552374 TMEM179Q6ZVK1 233 aa13.08□□□□□ -0.32
TMEM116-215ENST00000552374 KIAA1683Q9H0B3 1180 aa13.08□□□□□ -0.32
TMEM116-215ENST00000552374 LAMB1P07942 1786 aa13.08□□□□□ -0.32
TMEM116-215ENST00000552374 DOCK1Q14185 1865 aa13.08□□□□□ -0.32
TMEM116-215ENST00000552374 A0A1W2PRG0 241 aa13.07□□□□□ -0.32
TMEM116-215ENST00000552374 PATL2C9JE40 543 aaKnown RBP13.07□□□□□ -0.32
TMEM116-215ENST00000552374 TDO2P48775 406 aa13.07□□□□□ -0.32
TMEM116-215ENST00000552374 ATP2B2Q01814 1243 aa13.07□□□□□ -0.32
TMEM116-215ENST00000552374 C16orf86Q6ZW13 317 aa13.07□□□□□ -0.32
TMEM116-215ENST00000552374 CCAR1Q8IX12 1150 aaKnown RBP13.07□□□□□ -0.32
TMEM116-215ENST00000552374 GPRC5AQ8NFJ5 357 aa13.07□□□□□ -0.32
TMEM116-215ENST00000552374 EVI5LQ96CN4 794 aa13.07□□□□□ -0.32
TMEM116-215ENST00000552374 CCDC17Q96LX7 622 aa13.07□□□□□ -0.32
TMEM116-215ENST00000552374 PAGR1Q9BTK6 254 aa13.07□□□□□ -0.32
TMEM116-215ENST00000552374 MKNK2Q9HBH9 465 aa13.07□□□□□ -0.32
TMEM116-215ENST00000552374 TXNRD2Q9NNW7 524 aa13.07□□□□□ -0.32
TMEM116-215ENST00000552374 RBPJLQ9UBG7 517 aa13.07□□□□□ -0.32
TMEM116-215ENST00000552374 ARPP21Q9UBL0 812 aaPredicted RBP13.07□□□□□ -0.32
TMEM116-215ENST00000552374 STAP2Q9UGK3 403 aa13.07□□□□□ -0.32
TMEM116-215ENST00000552374 BRCA2P51587 3418 aa13.07□□□□□ -0.32
TMEM116-215ENST00000552374 SALL3Q9BXA9 1300 aa13.07□□□□□ -0.32
TMEM116-215ENST00000552374 ADCY3O60266 1144 aa13.06□□□□□ -0.32
TMEM116-215ENST00000552374 GNAT2P19087 354 aa13.06□□□□□ -0.32
TMEM116-215ENST00000552374 VCAM1P19320 739 aa13.06□□□□□ -0.32
TMEM116-215ENST00000552374 MTFR1Q15390 333 aa13.06□□□□□ -0.32
TMEM116-215ENST00000552374 Q3C1V9 767 aa13.06□□□□□ -0.32
TMEM116-215ENST00000552374 SBK1Q52WX2 424 aa13.06□□□□□ -0.32
TMEM116-215ENST00000552374 GIMAP6Q6P9H5 292 aa13.06□□□□□ -0.32
TMEM116-215ENST00000552374 CATSPERGQ6ZRH7 1159 aa13.06□□□□□ -0.32
TMEM116-215ENST00000552374 CHD1LQ86WJ1 897 aa13.06□□□□□ -0.32
TMEM116-215ENST00000552374 CLEC10AQ8IUN9 316 aa13.06□□□□□ -0.32
TMEM116-215ENST00000552374 C12orf42Q96LP6 360 aa13.06□□□□□ -0.32
TMEM116-215ENST00000552374 RPAP3Q9H6T3 665 aaPredicted RBP13.06□□□□□ -0.32
TMEM116-215ENST00000552374 TRIM6-TRIM34B2RNG4 842 aa13.05□□□□□ -0.32
TMEM116-215ENST00000552374 RAD21O60216 631 aa13.05□□□□□ -0.32
TMEM116-215ENST00000552374 ELNP15502 786 aa13.05□□□□□ -0.32
TMEM116-215ENST00000552374 ICA1Q05084 483 aa13.05□□□□□ -0.32
TMEM116-215ENST00000552374 ZMYM1Q5SVZ6 1142 aa13.05□□□□□ -0.32
TMEM116-215ENST00000552374 SIAH1Q8IUQ4 282 aa13.05□□□□□ -0.32
TMEM116-215ENST00000552374 SMC5Q8IY18 1101 aa13.05□□□□□ -0.32
TMEM116-215ENST00000552374 NACAP1Q9BZK3 213 aa13.05□□□□□ -0.32
TMEM116-215ENST00000552374 ARHGEF10LQ9HCE6 1279 aa13.05□□□□□ -0.32
TMEM116-215ENST00000552374 MORF4L1Q9UBU8 362 aa13.05□□□□□ -0.32
TMEM116-215ENST00000552374 SIPA1L1O43166 1804 aa13.05□□□□□ -0.32
TMEM116-215ENST00000552374 ERVK-9P63128 1117 aa13.05□□□□□ -0.32
TMEM116-215ENST00000552374 ERVK-24P63145 666 aa13.05□□□□□ -0.32
TMEM116-215ENST00000552374 UBXN2AP68543 259 aa13.05□□□□□ -0.32
TMEM116-215ENST00000552374 NUCB1Q02818 461 aa13.05□□□□□ -0.32
TMEM116-215ENST00000552374 POTEEQ6S8J3 1075 aa13.05□□□□□ -0.32
TMEM116-215ENST00000552374 SAMD1Q6SPF0 538 aaPredicted RBP13.05□□□□□ -0.32
TMEM116-215ENST00000552374 CCDC129Q6ZRS4 1044 aa13.05□□□□□ -0.32
TMEM116-215ENST00000552374 IFNL3Q8IZI9 196 aa13.05□□□□□ -0.32
TMEM116-215ENST00000552374 ZNF444Q8N0Y2 327 aaPredicted RBP13.05□□□□□ -0.32
TMEM116-215ENST00000552374 SPICE1Q8N0Z3 855 aa13.05□□□□□ -0.32
TMEM116-215ENST00000552374 SLAIN1Q8ND83 568 aa13.05□□□□□ -0.32
TMEM116-215ENST00000552374 RILPL2Q969X0 211 aa13.05□□□□□ -0.32
TMEM116-215ENST00000552374 KANSL2Q9H9L4 492 aa13.05□□□□□ -0.32
TMEM116-215ENST00000552374 CWC22Q9HCG8 908 aaKnown RBP13.05□□□□□ -0.32
TMEM116-215ENST00000552374 EPB41L4AQ9HCS5 686 aaPredicted RBP13.05□□□□□ -0.32
TMEM116-215ENST00000552374 MKI67P46013 3256 aaKnown RBP13.04□□□□□ -0.32
TMEM116-215ENST00000552374 PHIPQ8WWQ0 1821 aa13.04□□□□□ -0.32
TMEM116-215ENST00000552374 MYH1P12882 1939 aa13.04□□□□□ -0.32
TMEM116-215ENST00000552374 EEF2P13639 858 aaKnown RBP13.04□□□□□ -0.32
TMEM116-215ENST00000552374 KIAA1755Q5JYT7 1200 aa13.04□□□□□ -0.32
TMEM116-215ENST00000552374 GTF3C2Q8WUA4 911 aaPredicted RBP13.04□□□□□ -0.32
TMEM116-215ENST00000552374 TANGO6Q9C0B7 1094 aa13.04□□□□□ -0.32
TMEM116-215ENST00000552374 RNF208Q9H0X6 261 aa13.04□□□□□ -0.32
TMEM116-215ENST00000552374 NAPBQ9H115 298 aa13.04□□□□□ -0.32
TMEM116-215ENST00000552374 HOXC10Q9NYD6 342 aa13.04□□□□□ -0.32
TMEM116-215ENST00000552374 GJD2Q9UKL4 321 aa13.04□□□□□ -0.32
TMEM116-215ENST00000552374 TMX2Q9Y320 296 aa13.04□□□□□ -0.32
TMEM116-215ENST00000552374 RABGAP1Q9Y3P9 1069 aa13.04□□□□□ -0.32
TMEM116-215ENST00000552374 KIAA0100Q14667 2235 aaKnown RBP13.03□□□□□ -0.32
TMEM116-215ENST00000552374 PRDM1O75626 825 aa13.03□□□□□ -0.32
TMEM116-215ENST00000552374 CCL5P13501 91 aa13.03□□□□□ -0.32
TMEM116-215ENST00000552374 RASA1P20936 1047 aa13.03□□□□□ -0.32
TMEM116-215ENST00000552374 IRF5Q13568 498 aa13.03□□□□□ -0.32
TMEM116-215ENST00000552374 COG2Q14746 738 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms