RNA–Protein interactions for RNA: ENST00000552343.1

HCFC2-206, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 992 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-206ENST00000552343 ARNTP27540 789 aa6.49□□□□□ -1.37
HCFC2-206ENST00000552343 PRDM5Q9NQX1 630 aaPredicted RBP6.49□□□□□ -1.37
HCFC2-206ENST00000552343 SMG5Q9UPR3 1016 aaKnown RBP6.49□□□□□ -1.37
HCFC2-206ENST00000552343 JAG2Q9Y219 1238 aa6.49□□□□□ -1.37
HCFC2-206ENST00000552343 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.49□□□□□ -1.37
HCFC2-206ENST00000552343 CSADQ9Y600 493 aa6.49□□□□□ -1.37
HCFC2-206ENST00000552343 ETV2O00321 342 aaPredicted RBP6.48□□□□□ -1.37
HCFC2-206ENST00000552343 MEI1Q5TIA1 1274 aa6.48□□□□□ -1.37
HCFC2-206ENST00000552343 C3orf58Q8NDZ4 430 aa6.48□□□□□ -1.37
HCFC2-206ENST00000552343 RSRP1Q9BUV0 290 aa6.48□□□□□ -1.37
HCFC2-206ENST00000552343 EPB41L4BQ9H329 900 aa6.48□□□□□ -1.37
HCFC2-206ENST00000552343 MAPK8IP1Q9UQF2 711 aa6.48□□□□□ -1.37
HCFC2-206ENST00000552343 PRR33A8MZF0 331 aa6.47□□□□□ -1.37
HCFC2-206ENST00000552343 ZNF252P-AS1Q0IIN9 211 aa6.47□□□□□ -1.37
HCFC2-206ENST00000552343 LRRC14Q15048 493 aa6.47□□□□□ -1.37
HCFC2-206ENST00000552343 NAALADL2Q58DX5 795 aa6.47□□□□□ -1.37
HCFC2-206ENST00000552343 LDLRAD1Q5T700 205 aa6.47□□□□□ -1.37
HCFC2-206ENST00000552343 CDKAL1Q5VV42 579 aa6.47□□□□□ -1.37
HCFC2-206ENST00000552343 MPRIPQ6WCQ1 1025 aa6.47□□□□□ -1.37
HCFC2-206ENST00000552343 METTL16Q86W50 562 aaKnown RBP6.47□□□□□ -1.37
HCFC2-206ENST00000552343 SREK1Q8WXA9 508 aaKnown RBP6.47□□□□□ -1.37
HCFC2-206ENST00000552343 ACSBG1Q96GR2 724 aa6.47□□□□□ -1.37
HCFC2-206ENST00000552343 EMILIN2Q9BXX0 1053 aa6.47□□□□□ -1.37
HCFC2-206ENST00000552343 CAPN10Q9HC96 672 aa6.47□□□□□ -1.37
HCFC2-206ENST00000552343 INPP5FQ9Y2H2 1132 aa6.47□□□□□ -1.37
HCFC2-206ENST00000552343 DCDC2CA8MYV0 355 aa6.46□□□□□ -1.38
HCFC2-206ENST00000552343 FAM155AB1AL88 458 aaPredicted RBP6.46□□□□□ -1.38
HCFC2-206ENST00000552343 NUAK1O60285 661 aa6.46□□□□□ -1.38
HCFC2-206ENST00000552343 NME2P22392 152 aa6.46□□□□□ -1.38
HCFC2-206ENST00000552343 GLDCP23378 1020 aa6.46□□□□□ -1.38
HCFC2-206ENST00000552343 RING1Q06587 406 aa6.46□□□□□ -1.38
HCFC2-206ENST00000552343 C9orf131Q5VYM1 1079 aa6.46□□□□□ -1.38
HCFC2-206ENST00000552343 TPTE2Q6XPS3 522 aa6.46□□□□□ -1.38
HCFC2-206ENST00000552343 ERMP1Q7Z2K6 904 aa6.46□□□□□ -1.38
HCFC2-206ENST00000552343 DRC1Q96MC2 740 aa6.46□□□□□ -1.38
HCFC2-206ENST00000552343 CACNA2D2Q9NY47 1150 aa6.46□□□□□ -1.38
HCFC2-206ENST00000552343 USP35Q9P2H5 1018 aa6.46□□□□□ -1.38
HCFC2-206ENST00000552343 CNTNAP4Q9C0A0 1308 aa6.46□□□□□ -1.38
HCFC2-206ENST00000552343 LOC105371045A0A1W2PR82 267 aa6.45□□□□□ -1.38
HCFC2-206ENST00000552343 GBP2P32456 591 aaPredicted RBP6.45□□□□□ -1.38
HCFC2-206ENST00000552343 LINC00310P59036 64 aa6.45□□□□□ -1.38
HCFC2-206ENST00000552343 RPS26P62854 115 aaKnown RBP6.45□□□□□ -1.38
HCFC2-206ENST00000552343 SCARA3Q6AZY7 606 aa6.45□□□□□ -1.38
HCFC2-206ENST00000552343 ARMCX6Q7L4S7 300 aa6.45□□□□□ -1.38
HCFC2-206ENST00000552343 C12orf40Q86WS4 652 aa6.45□□□□□ -1.38
HCFC2-206ENST00000552343 SLC43A3Q8NBI5 491 aa6.45□□□□□ -1.38
HCFC2-206ENST00000552343 ABHD4Q8TB40 342 aa6.45□□□□□ -1.38
HCFC2-206ENST00000552343 KCNN1Q92952 543 aa6.45□□□□□ -1.38
HCFC2-206ENST00000552343 RELTQ969Z4 430 aa6.45□□□□□ -1.38
HCFC2-206ENST00000552343 ALPK1Q96QP1 1244 aa6.45□□□□□ -1.38
HCFC2-206ENST00000552343 CBX8Q9HC52 389 aa6.45□□□□□ -1.38
HCFC2-206ENST00000552343 PICK1Q9NRD5 415 aa6.45□□□□□ -1.38
HCFC2-206ENST00000552343 DDX41Q9UJV9 622 aaKnown RBP6.45□□□□□ -1.38
HCFC2-206ENST00000552343 H3BS24 57 aa6.44□□□□□ -1.38
HCFC2-206ENST00000552343 FANCGO15287 622 aa6.44□□□□□ -1.38
HCFC2-206ENST00000552343 ZBTB37Q5TC79 503 aa6.44□□□□□ -1.38
HCFC2-206ENST00000552343 CDC37L1Q7L3B6 337 aa6.44□□□□□ -1.38
HCFC2-206ENST00000552343 MFSD4AQ8N468 514 aa6.44□□□□□ -1.38
HCFC2-206ENST00000552343 CCDC120Q96HB5 630 aa6.44□□□□□ -1.38
HCFC2-206ENST00000552343 TMEM74Q96NL1 305 aa6.44□□□□□ -1.38
HCFC2-206ENST00000552343 NECAB3Q96P71 396 aaPredicted RBP6.44□□□□□ -1.38
HCFC2-206ENST00000552343 IRF2BPLQ9H1B7 796 aa6.44□□□□□ -1.38
HCFC2-206ENST00000552343 CYP8B1Q9UNU6 501 aa6.44□□□□□ -1.38
HCFC2-206ENST00000552343 SLITRK5O94991 958 aa6.43□□□□□ -1.38
HCFC2-206ENST00000552343 LIG3P49916 1009 aa6.43□□□□□ -1.38
HCFC2-206ENST00000552343 RAD51AP2Q09MP3 1159 aa6.43□□□□□ -1.38
HCFC2-206ENST00000552343 TTC6Q86TZ1 520 aa6.43□□□□□ -1.38
HCFC2-206ENST00000552343 CCDC84Q86UT8 332 aaPredicted RBP6.43□□□□□ -1.38
HCFC2-206ENST00000552343 KIAA0825Q8IV33 1275 aa6.43□□□□□ -1.38
HCFC2-206ENST00000552343 SLC26A8Q96RN1 970 aa6.43□□□□□ -1.38
HCFC2-206ENST00000552343 SPON2Q9BUD6 331 aa6.43□□□□□ -1.38
HCFC2-206ENST00000552343 SLAMF8Q9P0V8 285 aa6.43□□□□□ -1.38
HCFC2-206ENST00000552343 SUPT16HQ9Y5B9 1047 aaKnown RBP6.43□□□□□ -1.38
HCFC2-206ENST00000552343 ST14Q9Y5Y6 855 aa6.43□□□□□ -1.38
HCFC2-206ENST00000552343 FBXO24O75426 580 aa6.42□□□□□ -1.38
HCFC2-206ENST00000552343 RAC2P15153 192 aa6.42□□□□□ -1.38
HCFC2-206ENST00000552343 ARID5AQ03989 594 aa6.42□□□□□ -1.38
HCFC2-206ENST00000552343 COL9A2Q14055 689 aaPredicted RBP6.42□□□□□ -1.38
HCFC2-206ENST00000552343 SFRP5Q5T4F7 317 aa6.42□□□□□ -1.38
HCFC2-206ENST00000552343 TTBK2Q6IQ55 1244 aa6.42□□□□□ -1.38
HCFC2-206ENST00000552343 C22orf34Q6ZV56 151 aa6.42□□□□□ -1.38
HCFC2-206ENST00000552343 GRIN3AQ8TCU5 1115 aa6.42□□□□□ -1.38
HCFC2-206ENST00000552343 UBXN4Q92575 508 aa6.42□□□□□ -1.38
HCFC2-206ENST00000552343 PARD6AQ9NPB6 346 aa6.42□□□□□ -1.38
HCFC2-206ENST00000552343 KBTBD4Q9NVX7 518 aa6.42□□□□□ -1.38
HCFC2-206ENST00000552343 TPX2Q9ULW0 747 aaKnown RBP6.42□□□□□ -1.38
HCFC2-206ENST00000552343 LRIG2O94898 1065 aa6.41□□□□□ -1.38
HCFC2-206ENST00000552343 EIF4A3P38919 411 aaKnown RBP6.41□□□□□ -1.38
HCFC2-206ENST00000552343 ERVFC1P60507 584 aa6.41□□□□□ -1.38
HCFC2-206ENST00000552343 LMNB2Q03252 620 aa6.41□□□□□ -1.38
HCFC2-206ENST00000552343 MAP3K11Q16584 847 aa6.41□□□□□ -1.38
HCFC2-206ENST00000552343 ZNF394Q53GI3 561 aa6.41□□□□□ -1.38
HCFC2-206ENST00000552343 SNAP47Q5SQN1 464 aa6.41□□□□□ -1.38
HCFC2-206ENST00000552343 KCT2Q8NC54 265 aa6.41□□□□□ -1.38
HCFC2-206ENST00000552343 UBE2FQ969M7 185 aa6.41□□□□□ -1.38
HCFC2-206ENST00000552343 GPRASP2Q96D09 838 aa6.41□□□□□ -1.38
HCFC2-206ENST00000552343 TANGO6Q9C0B7 1094 aa6.41□□□□□ -1.38
HCFC2-206ENST00000552343 MIR1-1HGQ9H1L0 117 aa6.41□□□□□ -1.38
HCFC2-206ENST00000552343 ACBD3Q9H3P7 528 aa6.41□□□□□ -1.38
HCFC2-206ENST00000552343 CAPN6Q9Y6Q1 641 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms