RNA–Protein interactions for RNA: ENST00000552341.5

PFDN5-216, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 1,980 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-216ENST00000552341 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.58□□□□□ -0.4
PFDN5-216ENST00000552341 OSBPL5Q9H0X9 879 aaPredicted RBP12.58□□□□□ -0.4
PFDN5-216ENST00000552341 ZNF287Q9HBT7 754 aa12.58□□□□□ -0.4
PFDN5-216ENST00000552341 MMP1P03956 469 aa12.58□□□□□ -0.4
PFDN5-216ENST00000552341 TGFB2P61812 414 aa12.58□□□□□ -0.4
PFDN5-216ENST00000552341 TPRNQ4KMQ1 711 aa12.58□□□□□ -0.4
PFDN5-216ENST00000552341 CCDC178Q5BJE1 867 aa12.58□□□□□ -0.4
PFDN5-216ENST00000552341 PNMA1Q8ND90 353 aa12.58□□□□□ -0.4
PFDN5-216ENST00000552341 POLR3EQ9NVU0 708 aa12.58□□□□□ -0.4
PFDN5-216ENST00000552341 SERPINA10Q9UK55 444 aa12.58□□□□□ -0.4
PFDN5-216ENST00000552341 CLIC4Q9Y696 253 aa12.58□□□□□ -0.4
PFDN5-216ENST00000552341 CNTNAP5Q8WYK1 1306 aa12.57□□□□□ -0.4
PFDN5-216ENST00000552341 MYH8P13535 1937 aa12.57□□□□□ -0.4
PFDN5-216ENST00000552341 PLIN4Q96Q06 1357 aa12.57□□□□□ -0.4
PFDN5-216ENST00000552341 NASPP49321 788 aaPredicted RBP12.57□□□□□ -0.4
PFDN5-216ENST00000552341 ZFPM1Q8IX07 1006 aa12.57□□□□□ -0.4
PFDN5-216ENST00000552341 LINC00301Q8NCQ3 95 aa12.57□□□□□ -0.4
PFDN5-216ENST00000552341 TMEM47Q9BQJ4 181 aa12.57□□□□□ -0.4
PFDN5-216ENST00000552341 MTFR1LQ9H019 292 aa12.57□□□□□ -0.4
PFDN5-216ENST00000552341 KCNJ14Q9UNX9 436 aa12.57□□□□□ -0.4
PFDN5-216ENST00000552341 ATF5Q9Y2D1 282 aaPredicted RBP12.57□□□□□ -0.4
PFDN5-216ENST00000552341 GMLQ99445 158 aa12.56□□□□□ -0.4
PFDN5-216ENST00000552341 SGIP1Q9BQI5 828 aa12.56□□□□□ -0.4
PFDN5-216ENST00000552341 IDI2Q9BXS1 227 aa12.56□□□□□ -0.4
PFDN5-216ENST00000552341 KAT14Q9H8E8 782 aa12.56□□□□□ -0.4
PFDN5-216ENST00000552341 FAM198AQ9UFP1 575 aa12.56□□□□□ -0.4
PFDN5-216ENST00000552341 V9GY48 417 aaPredicted RBP12.56□□□□□ -0.4
PFDN5-216ENST00000552341 GREB1LQ9C091 1923 aaPredicted RBP12.56□□□□□ -0.4
PFDN5-216ENST00000552341 FER1L6Q2WGJ9 1857 aa12.56□□□□□ -0.4
PFDN5-216ENST00000552341 BAZ2BQ9UIF8 2168 aaKnown RBP12.56□□□□□ -0.4
PFDN5-216ENST00000552341 hCG_1642624A0A1W2PR95 340 aa12.56□□□□□ -0.4
PFDN5-216ENST00000552341 BTBD18B2RXH4 712 aa12.56□□□□□ -0.4
PFDN5-216ENST00000552341 NPM3O75607 178 aaKnown RBP12.56□□□□□ -0.4
PFDN5-216ENST00000552341 YEATS4O95619 227 aa12.56□□□□□ -0.4
PFDN5-216ENST00000552341 TRIM29Q14134 588 aa12.56□□□□□ -0.4
PFDN5-216ENST00000552341 GRM4Q14833 912 aa12.56□□□□□ -0.4
PFDN5-216ENST00000552341 SLC35G1Q2M3R5 365 aa12.56□□□□□ -0.4
PFDN5-216ENST00000552341 GLIPR1L2Q4G1C9 344 aa12.56□□□□□ -0.4
PFDN5-216ENST00000552341 CTCFLQ8NI51 663 aaPredicted RBP12.56□□□□□ -0.4
PFDN5-216ENST00000552341 PANK2Q9BZ23 570 aa12.56□□□□□ -0.4
PFDN5-216ENST00000552341 RBSNQ9H1K0 784 aa12.56□□□□□ -0.4
PFDN5-216ENST00000552341 ZNF277Q9NRM2 450 aaPredicted RBP12.56□□□□□ -0.4
PFDN5-216ENST00000552341 MAD2L2Q9UI95 211 aa12.56□□□□□ -0.4
PFDN5-216ENST00000552341 MYO3BQ8WXR4 1341 aa12.55□□□□□ -0.4
PFDN5-216ENST00000552341 IGKV6D-41A0A0C4DH26 115 aa12.55□□□□□ -0.4
PFDN5-216ENST00000552341 VIL1P09327 827 aaKnown RBP12.55□□□□□ -0.4
PFDN5-216ENST00000552341 VEGFAP15692 232 aaPredicted RBP12.55□□□□□ -0.4
PFDN5-216ENST00000552341 SHMT1P34896 483 aa12.55□□□□□ -0.4
PFDN5-216ENST00000552341 NPY5RQ15761 445 aa12.55□□□□□ -0.4
PFDN5-216ENST00000552341 NOSTRINQ8IVI9 506 aa12.55□□□□□ -0.4
PFDN5-216ENST00000552341 DIS3L2Q8IYB7 885 aaKnown RBP12.55□□□□□ -0.4
PFDN5-216ENST00000552341 STAG2Q8N3U4 1231 aa12.55□□□□□ -0.4
PFDN5-216ENST00000552341 CEP95Q96GE4 821 aa12.55□□□□□ -0.4
PFDN5-216ENST00000552341 VPS33BQ9H267 617 aa12.55□□□□□ -0.4
PFDN5-216ENST00000552341 PIM2Q9P1W9 311 aa12.55□□□□□ -0.4
PFDN5-216ENST00000552341 SERPINB13Q9UIV8 391 aa12.55□□□□□ -0.4
PFDN5-216ENST00000552341 STX8Q9UNK0 236 aa12.55□□□□□ -0.4
PFDN5-216ENST00000552341 PALM3A6NDB9 673 aaPredicted RBP12.54□□□□□ -0.4
PFDN5-216ENST00000552341 GOLGA6L4A6NEF3 574 aa12.54□□□□□ -0.4
PFDN5-216ENST00000552341 NR1I2O75469 434 aa12.54□□□□□ -0.4
PFDN5-216ENST00000552341 LETM1O95202 739 aaPredicted RBP12.54□□□□□ -0.4
PFDN5-216ENST00000552341 KIF5BP33176 963 aa12.54□□□□□ -0.4
PFDN5-216ENST00000552341 CACNB3P54284 484 aa12.54□□□□□ -0.4
PFDN5-216ENST00000552341 ANO1Q5XXA6 986 aa12.54□□□□□ -0.4
PFDN5-216ENST00000552341 SH3BP5LQ7L8J4 393 aa12.54□□□□□ -0.4
PFDN5-216ENST00000552341 KLHL34Q8N239 644 aa12.54□□□□□ -0.4
PFDN5-216ENST00000552341 OXER1Q8TDS5 423 aa12.54□□□□□ -0.4
PFDN5-216ENST00000552341 FUCA2Q9BTY2 467 aa12.54□□□□□ -0.4
PFDN5-216ENST00000552341 PHF20Q9BVI0 1012 aa12.54□□□□□ -0.4
PFDN5-216ENST00000552341 EHD4Q9H223 541 aa12.54□□□□□ -0.4
PFDN5-216ENST00000552341 FOXP1Q9H334 677 aaPredicted RBP12.54□□□□□ -0.4
PFDN5-216ENST00000552341 DACT1Q9NYF0 836 aa12.54□□□□□ -0.4
PFDN5-216ENST00000552341 PCDHA7Q9UN72 937 aa12.54□□□□□ -0.4
PFDN5-216ENST00000552341 PSMD14O00487 310 aa12.54□□□□□ -0.4
PFDN5-216ENST00000552341 SLURP2P0DP57 97 aa12.54□□□□□ -0.4
PFDN5-216ENST00000552341 TOB1P50616 345 aaPredicted RBP12.54□□□□□ -0.4
PFDN5-216ENST00000552341 NR5A1Q13285 461 aa12.54□□□□□ -0.4
PFDN5-216ENST00000552341 PTPAQ15257 358 aa12.54□□□□□ -0.4
PFDN5-216ENST00000552341 RSBN1LQ6PCB5 846 aaPredicted RBP12.54□□□□□ -0.4
PFDN5-216ENST00000552341 LARGE2Q8N3Y3 721 aa12.54□□□□□ -0.4
PFDN5-216ENST00000552341 GOLPH3LQ9H4A5 285 aa12.54□□□□□ -0.4
PFDN5-216ENST00000552341 DNAJC18Q9H819 358 aa12.54□□□□□ -0.4
PFDN5-216ENST00000552341 SWAP70Q9UH65 585 aa12.54□□□□□ -0.4
PFDN5-216ENST00000552341 TAOK2Q9UL54 1235 aa12.54□□□□□ -0.4
PFDN5-216ENST00000552341 DDTLA6NHG4 134 aaPredicted RBP12.53□□□□□ -0.4
PFDN5-216ENST00000552341 AKR1B1P15121 316 aa12.53□□□□□ -0.4
PFDN5-216ENST00000552341 AKAP17AQ02040 695 aaKnown RBP12.53□□□□□ -0.4
PFDN5-216ENST00000552341 SNW1Q13573 536 aaKnown RBP12.53□□□□□ -0.4
PFDN5-216ENST00000552341 R3HDM1Q15032 1099 aaKnown RBP12.53□□□□□ -0.4
PFDN5-216ENST00000552341 SLC39A14Q15043 492 aa12.53□□□□□ -0.4
PFDN5-216ENST00000552341 AXDND1Q5T1B0 1012 aaPredicted RBP12.53□□□□□ -0.4
PFDN5-216ENST00000552341 SOGA3Q5TF21 947 aa12.53□□□□□ -0.4
PFDN5-216ENST00000552341 ADALQ6DHV7 355 aa12.53□□□□□ -0.4
PFDN5-216ENST00000552341 RBM43Q6ZSC3 357 aaKnown RBP12.53□□□□□ -0.4
PFDN5-216ENST00000552341 RASGRP2Q7LDG7 609 aa12.53□□□□□ -0.4
PFDN5-216ENST00000552341 ENGASEQ8NFI3 743 aa12.53□□□□□ -0.4
PFDN5-216ENST00000552341 KCNG4Q8TDN1 519 aa12.53□□□□□ -0.4
PFDN5-216ENST00000552341 PRMT6Q96LA8 375 aaPredicted RBP12.53□□□□□ -0.4
PFDN5-216ENST00000552341 MTMR4Q9NYA4 1195 aa12.53□□□□□ -0.4
PFDN5-216ENST00000552341 VPS54Q9P1Q0 977 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms