RNA–Protein interactions for RNA: ENST00000551984.5

FGD4-215, Transcript of FYVE, RhoGEF and PH domain containing 4, human

TSL 5

Gene FGD4, Length 2,435 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGD4-215	ENST00000551984	UQCRH	P07919	91 aa		7.78	□□□□□ -1.16
FGD4-215	ENST00000551984	PTPRA	P18433	802 aa		7.78	□□□□□ -1.16
FGD4-215	ENST00000551984	CENPF	P49454	3210 aa		7.78	□□□□□ -1.16
FGD4-215	ENST00000551984	PSEN2	P49810	448 aa		7.78	□□□□□ -1.16
FGD4-215	ENST00000551984	CCDC173	Q0VFZ6	552 aa		7.78	□□□□□ -1.16
FGD4-215	ENST00000551984	MFSD10	Q14728	455 aa		7.78	□□□□□ -1.16
FGD4-215	ENST00000551984	ARHGEF6	Q15052	776 aa		7.78	□□□□□ -1.16
FGD4-215	ENST00000551984	TTC39A	Q5SRH9	613 aa		7.78	□□□□□ -1.16
FGD4-215	ENST00000551984	C17orf99	Q6UX52	265 aa		7.78	□□□□□ -1.16
FGD4-215	ENST00000551984		A0A0G2JLL6	359 aa	Predicted RBP	7.77	□□□□□ -1.17
FGD4-215	ENST00000551984	CTNND1	O60716	968 aa	Known RBP	7.77	□□□□□ -1.17
FGD4-215	ENST00000551984	CYP2E1	P05181	493 aa	Predicted RBP	7.77	□□□□□ -1.17
FGD4-215	ENST00000551984	MSN	P26038	577 aa	Known RBP	7.77	□□□□□ -1.17
FGD4-215	ENST00000551984	PPP4C	P60510	307 aa		7.77	□□□□□ -1.17
FGD4-215	ENST00000551984	OS9	Q13438	667 aa	Predicted RBP	7.77	□□□□□ -1.17
FGD4-215	ENST00000551984	PICALM	Q13492	652 aa		7.77	□□□□□ -1.17
FGD4-215	ENST00000551984	CCDC158	Q5M9N0	1113 aa		7.77	□□□□□ -1.17
FGD4-215	ENST00000551984	GPAT2	Q6NUI2	795 aa		7.77	□□□□□ -1.17
FGD4-215	ENST00000551984	PRRT2	Q7Z6L0	340 aa	Predicted RBP	7.77	□□□□□ -1.17
FGD4-215	ENST00000551984	OSBPL5	Q9H0X9	879 aa	Predicted RBP	7.77	□□□□□ -1.17
FGD4-215	ENST00000551984	RAI14	Q9P0K7	980 aa		7.77	□□□□□ -1.17
FGD4-215	ENST00000551984	DBNL	Q9UJU6	430 aa	Known RBP	7.77	□□□□□ -1.17
FGD4-215	ENST00000551984	AFG3L2	Q9Y4W6	797 aa		7.77	□□□□□ -1.17
FGD4-215	ENST00000551984	MYH1	P12882	1939 aa		7.77	□□□□□ -1.17
FGD4-215	ENST00000551984	PDHX	O00330	501 aa		7.77	□□□□□ -1.17
FGD4-215	ENST00000551984	IGHD	P01880	384 aa		7.77	□□□□□ -1.17
FGD4-215	ENST00000551984	SLURP2	P0DP57	97 aa		7.77	□□□□□ -1.17
FGD4-215	ENST00000551984	NCL	P19338	710 aa	Known RBP	7.77	□□□□□ -1.17
FGD4-215	ENST00000551984	FOSB	P53539	338 aa		7.77	□□□□□ -1.17
FGD4-215	ENST00000551984	LACTB	P83111	547 aa	Predicted RBP	7.77	□□□□□ -1.17
FGD4-215	ENST00000551984	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	7.77	□□□□□ -1.17
FGD4-215	ENST00000551984	PANK1	Q8TE04	598 aa		7.77	□□□□□ -1.17
FGD4-215	ENST00000551984	EAF2	Q96CJ1	260 aa	Predicted RBP	7.77	□□□□□ -1.17
FGD4-215	ENST00000551984	LRP2BP	Q9P2M1	347 aa		7.77	□□□□□ -1.17
FGD4-215	ENST00000551984	DYNC1I1	O14576	645 aa		7.76	□□□□□ -1.17
FGD4-215	ENST00000551984	GNRH1	P01148	92 aa		7.76	□□□□□ -1.17
FGD4-215	ENST00000551984	NAA16	Q6N069	864 aa	Predicted RBP	7.76	□□□□□ -1.17
FGD4-215	ENST00000551984	ARHGAP39	Q9C0H5	1083 aa		7.76	□□□□□ -1.17
FGD4-215	ENST00000551984	PICK1	Q9NRD5	415 aa		7.76	□□□□□ -1.17
FGD4-215	ENST00000551984	SNRK	Q9NRH2	765 aa		7.76	□□□□□ -1.17
FGD4-215	ENST00000551984	TLR7	Q9NYK1	1049 aa	Known RBP	7.76	□□□□□ -1.17
FGD4-215	ENST00000551984	VPS9D1	Q9Y2B5	631 aa		7.76	□□□□□ -1.17
FGD4-215	ENST00000551984	SLC45A1	Q9Y2W3	748 aa		7.76	□□□□□ -1.17
FGD4-215	ENST00000551984	PDE4DIP	Q5VU43	2346 aa		7.76	□□□□□ -1.17
FGD4-215	ENST00000551984	GTPBP6	O43824	516 aa	Predicted RBP	7.76	□□□□□ -1.17
FGD4-215	ENST00000551984	BCR	P11274	1271 aa		7.76	□□□□□ -1.17
FGD4-215	ENST00000551984	ZAP70	P43403	619 aa		7.76	□□□□□ -1.17
FGD4-215	ENST00000551984	PRMT2	P55345	433 aa		7.76	□□□□□ -1.17
FGD4-215	ENST00000551984	FASTKD5	Q7L8L6	764 aa	Known RBP	7.76	□□□□□ -1.17
FGD4-215	ENST00000551984	METTL16	Q86W50	562 aa	Known RBP	7.76	□□□□□ -1.17
FGD4-215	ENST00000551984	ERC1	Q8IUD2	1116 aa		7.76	□□□□□ -1.17
FGD4-215	ENST00000551984	TEX11	Q8IYF3	940 aa		7.76	□□□□□ -1.17
FGD4-215	ENST00000551984	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	7.76	□□□□□ -1.17
FGD4-215	ENST00000551984	ZNF333	Q96JL9	665 aa		7.76	□□□□□ -1.17
FGD4-215	ENST00000551984	CCDC8	Q9H0W5	538 aa	Predicted RBP	7.76	□□□□□ -1.17
FGD4-215	ENST00000551984	UPF2	Q9HAU5	1272 aa	Known RBP	7.76	□□□□□ -1.17
FGD4-215	ENST00000551984	PIH1D3	Q9NQM4	214 aa	Known RBP	7.76	□□□□□ -1.17
FGD4-215	ENST00000551984	PTCH2	Q9Y6C5	1203 aa		7.76	□□□□□ -1.17
FGD4-215	ENST00000551984	ZHX2	Q9Y6X8	837 aa		7.76	□□□□□ -1.17
FGD4-215	ENST00000551984	BAG3	O95817	575 aa		7.75	□□□□□ -1.17
FGD4-215	ENST00000551984	CTGF	P29279	349 aa		7.75	□□□□□ -1.17
FGD4-215	ENST00000551984	KIF22	Q14807	665 aa		7.75	□□□□□ -1.17
FGD4-215	ENST00000551984	ADGRA1	Q86SQ6	560 aa		7.75	□□□□□ -1.17
FGD4-215	ENST00000551984	IPO4	Q8TEX9	1081 aa	Known RBP	7.75	□□□□□ -1.17
FGD4-215	ENST00000551984	KCNK17	Q96T54	332 aa		7.75	□□□□□ -1.17
FGD4-215	ENST00000551984	PARK7	Q99497	189 aa	Known RBP	7.75	□□□□□ -1.17
FGD4-215	ENST00000551984	CCDC94	Q9BW85	323 aa	Predicted RBP	7.75	□□□□□ -1.17
FGD4-215	ENST00000551984	TMEM51	Q9NW97	253 aa		7.75	□□□□□ -1.17
FGD4-215	ENST00000551984	CPA4	Q9UI42	421 aa		7.75	□□□□□ -1.17
FGD4-215	ENST00000551984	KIAA0100	Q14667	2235 aa	Known RBP	7.75	□□□□□ -1.17
FGD4-215	ENST00000551984	DDX60L	Q5H9U9	1706 aa	Known RBP	7.75	□□□□□ -1.17
FGD4-215	ENST00000551984	PLCB2	Q00722	1185 aa		7.74	□□□□□ -1.17
FGD4-215	ENST00000551984	RRP1B	Q14684	758 aa	Known RBP	7.74	□□□□□ -1.17
FGD4-215	ENST00000551984	TMED8	Q6PL24	325 aa	Predicted RBP	7.74	□□□□□ -1.17
FGD4-215	ENST00000551984	ZNF454	Q8N9F8	522 aa		7.74	□□□□□ -1.17
FGD4-215	ENST00000551984	NOL10	Q9BSC4	688 aa	Known RBP	7.74	□□□□□ -1.17
FGD4-215	ENST00000551984	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	7.74	□□□□□ -1.17	3e-7	■■□□□ 13.9
FGD4-215	ENST00000551984	ZBTB40	Q9NUA8	1239 aa		7.74	□□□□□ -1.17
FGD4-215	ENST00000551984	AATF	Q9NY61	560 aa	Known RBP eCLIP	7.74	□□□□□ -1.17
FGD4-215	ENST00000551984	HERC5	Q9UII4	1024 aa	Known RBP	7.74	□□□□□ -1.17
FGD4-215	ENST00000551984	EXOC6B	Q9Y2D4	811 aa		7.74	□□□□□ -1.17
FGD4-215	ENST00000551984	BRCA2	P51587	3418 aa		7.74	□□□□□ -1.17
FGD4-215	ENST00000551984	ZNF500	O60304	480 aa	Predicted RBP	7.74	□□□□□ -1.17
FGD4-215	ENST00000551984	PTPRE	P23469	700 aa		7.74	□□□□□ -1.17
FGD4-215	ENST00000551984	NASP	P49321	788 aa	Predicted RBP	7.74	□□□□□ -1.17
FGD4-215	ENST00000551984	HSP90AB4P	Q58FF6	505 aa		7.74	□□□□□ -1.17
FGD4-215	ENST00000551984	RPAP2	Q8IXW5	612 aa	Predicted RBP	7.74	□□□□□ -1.17
FGD4-215	ENST00000551984	DHX36	Q9H2U1	1008 aa	Known RBP	7.74	□□□□□ -1.17
FGD4-215	ENST00000551984	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	7.74	□□□□□ -1.17
FGD4-215	ENST00000551984	DDX19B	Q9UMR2	479 aa		7.74	□□□□□ -1.17
FGD4-215	ENST00000551984	MKI67	P46013	3256 aa	Known RBP	7.74	□□□□□ -1.17
FGD4-215	ENST00000551984	DOCK3	Q8IZD9	2030 aa		7.74	□□□□□ -1.17
FGD4-215	ENST00000551984	FLT1	P17948	1338 aa		7.74	□□□□□ -1.17
FGD4-215	ENST00000551984	FAM196B	A6NMK8	535 aa		7.73	□□□□□ -1.17
FGD4-215	ENST00000551984	RGS20	O76081	388 aa		7.73	□□□□□ -1.17
FGD4-215	ENST00000551984	KIF20A	O95235	890 aa		7.73	□□□□□ -1.17
FGD4-215	ENST00000551984	CAP2	P40123	477 aa		7.73	□□□□□ -1.17
FGD4-215	ENST00000551984	PSMC4	P43686	418 aa		7.73	□□□□□ -1.17
FGD4-215	ENST00000551984	SLC9C1	Q4G0N8	1177 aa		7.73	□□□□□ -1.17
FGD4-215	ENST00000551984	NBPF11	Q86T75	865 aa		7.73	□□□□□ -1.17

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