RNA–Protein interactions for RNA: ENST00000551855.1

CPNE8-208, Transcript of copine 8, human

TSL 3

Gene CPNE8, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPNE8-208	ENST00000551855	XRCC5	P13010	732 aa	Known RBP	4.84	□□□□□ -1.63
CPNE8-208	ENST00000551855	NKG7	Q16617	165 aa		4.84	□□□□□ -1.63
CPNE8-208	ENST00000551855	NAALADL2	Q58DX5	795 aa		4.84	□□□□□ -1.63
CPNE8-208	ENST00000551855	TPTE2	Q6XPS3	522 aa		4.84	□□□□□ -1.63
CPNE8-208	ENST00000551855	C22orf34	Q6ZV56	151 aa		4.84	□□□□□ -1.63
CPNE8-208	ENST00000551855	TMEM87A	Q8NBN3	555 aa		4.84	□□□□□ -1.63
CPNE8-208	ENST00000551855	C3orf58	Q8NDZ4	430 aa		4.84	□□□□□ -1.63
CPNE8-208	ENST00000551855	RELT	Q969Z4	430 aa		4.84	□□□□□ -1.63
CPNE8-208	ENST00000551855	CITED4	Q96RK1	184 aa		4.84	□□□□□ -1.63
CPNE8-208	ENST00000551855	MIPEP	Q99797	713 aa		4.84	□□□□□ -1.63
CPNE8-208	ENST00000551855	ADAMTS10	Q9H324	1103 aa		4.84	□□□□□ -1.63
CPNE8-208	ENST00000551855	NLRP2	Q9NX02	1062 aa		4.84	□□□□□ -1.63
CPNE8-208	ENST00000551855		A0A0G2JLL6	359 aa	Predicted RBP	4.83	□□□□□ -1.64
CPNE8-208	ENST00000551855	FBXO24	O75426	580 aa		4.83	□□□□□ -1.64
CPNE8-208	ENST00000551855	ERCC5	P28715	1186 aa	Predicted RBP	4.83	□□□□□ -1.64
CPNE8-208	ENST00000551855	HK2	P52789	917 aa		4.83	□□□□□ -1.64
CPNE8-208	ENST00000551855	PTPN11	Q06124	597 aa	Predicted RBP	4.83	□□□□□ -1.64
CPNE8-208	ENST00000551855	ZNF507	Q8TCN5	953 aa		4.83	□□□□□ -1.64
CPNE8-208	ENST00000551855	MYLIP	Q8WY64	445 aa		4.83	□□□□□ -1.64
CPNE8-208	ENST00000551855	SP110	Q9HB58	689 aa		4.83	□□□□□ -1.64
CPNE8-208	ENST00000551855	PPP4R2	Q9NY27	417 aa		4.83	□□□□□ -1.64
CPNE8-208	ENST00000551855	PNMA6F	A0A0J9YX94	578 aa		4.82	□□□□□ -1.64
CPNE8-208	ENST00000551855	PRAMEF27	A3QJZ7	478 aa		4.82	□□□□□ -1.64
CPNE8-208	ENST00000551855	BMP7	P18075	431 aa		4.82	□□□□□ -1.64
CPNE8-208	ENST00000551855	XPC	Q01831	940 aa	Predicted RBP	4.82	□□□□□ -1.64
CPNE8-208	ENST00000551855	RAD51AP2	Q09MP3	1159 aa		4.82	□□□□□ -1.64
CPNE8-208	ENST00000551855	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	4.82	□□□□□ -1.64
CPNE8-208	ENST00000551855	LRFN4	Q6PJG9	635 aa		4.82	□□□□□ -1.64
CPNE8-208	ENST00000551855	KCT2	Q8NC54	265 aa		4.82	□□□□□ -1.64
CPNE8-208	ENST00000551855	XAGE3	Q8WTP9	111 aa		4.82	□□□□□ -1.64
CPNE8-208	ENST00000551855	ALKBH8	Q96BT7	664 aa	Known RBP	4.82	□□□□□ -1.64
CPNE8-208	ENST00000551855	SLC26A8	Q96RN1	970 aa		4.82	□□□□□ -1.64
CPNE8-208	ENST00000551855	PARD6A	Q9NPB6	346 aa		4.82	□□□□□ -1.64
CPNE8-208	ENST00000551855	TMEM59L	Q9UK28	342 aa		4.82	□□□□□ -1.64
CPNE8-208	ENST00000551855	FOXD2	O60548	495 aa	Predicted RBP	4.81	□□□□□ -1.64
CPNE8-208	ENST00000551855	HPX	P02790	462 aa		4.81	□□□□□ -1.64
CPNE8-208	ENST00000551855	CDK8	P49336	464 aa		4.81	□□□□□ -1.64
CPNE8-208	ENST00000551855	TNK2	Q07912	1038 aa		4.81	□□□□□ -1.64
CPNE8-208	ENST00000551855	THAP5	Q7Z6K1	395 aa		4.81	□□□□□ -1.64
CPNE8-208	ENST00000551855	METTL16	Q86W50	562 aa	Known RBP	4.81	□□□□□ -1.64
CPNE8-208	ENST00000551855	ELMO3	Q96BJ8	720 aa		4.81	□□□□□ -1.64
CPNE8-208	ENST00000551855	CCDC120	Q96HB5	630 aa		4.81	□□□□□ -1.64
CPNE8-208	ENST00000551855	MCOLN1	Q9GZU1	580 aa		4.81	□□□□□ -1.64
CPNE8-208	ENST00000551855	RNF32	Q9H0A6	362 aa		4.81	□□□□□ -1.64
CPNE8-208	ENST00000551855	C19orf44	Q9H6X5	657 aa		4.81	□□□□□ -1.64
CPNE8-208	ENST00000551855	MYOCOS	A0A1B0GUC4	107 aa		4.8	□□□□□ -1.64
CPNE8-208	ENST00000551855	PRPF40A	O75400	957 aa	Known RBP	4.8	□□□□□ -1.64
CPNE8-208	ENST00000551855	RAC2	P15153	192 aa		4.8	□□□□□ -1.64
CPNE8-208	ENST00000551855	TNNI2	P48788	182 aa		4.8	□□□□□ -1.64
CPNE8-208	ENST00000551855	KRTAP10-2	P60368	255 aa		4.8	□□□□□ -1.64
CPNE8-208	ENST00000551855	DAB2	P98082	770 aa		4.8	□□□□□ -1.64
CPNE8-208	ENST00000551855	PSMD2	Q13200	908 aa		4.8	□□□□□ -1.64
CPNE8-208	ENST00000551855	LLGL2	Q6P1M3	1020 aa		4.8	□□□□□ -1.64
CPNE8-208	ENST00000551855	LETMD1	Q6P1Q0	360 aa		4.8	□□□□□ -1.64
CPNE8-208	ENST00000551855	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	4.8	□□□□□ -1.64
CPNE8-208	ENST00000551855	CDH24	Q86UP0	819 aa		4.8	□□□□□ -1.64
CPNE8-208	ENST00000551855	NT5DC4	Q86YG4	428 aa		4.8	□□□□□ -1.64
CPNE8-208	ENST00000551855	PLPPR2	Q96GM1	343 aa		4.8	□□□□□ -1.64
CPNE8-208	ENST00000551855	WNT10A	Q9GZT5	417 aa		4.8	□□□□□ -1.64
CPNE8-208	ENST00000551855	ZCCHC4	Q9H5U6	513 aa		4.8	□□□□□ -1.64
CPNE8-208	ENST00000551855	VTI1B	Q9UEU0	232 aa		4.8	□□□□□ -1.64
CPNE8-208	ENST00000551855	SCAMP3	O14828	347 aa	Known RBP	4.79	□□□□□ -1.64
CPNE8-208	ENST00000551855	SORBS3	O60504	671 aa		4.79	□□□□□ -1.64
CPNE8-208	ENST00000551855	CTSH	P09668	335 aa		4.79	□□□□□ -1.64
CPNE8-208	ENST00000551855	SRF	P11831	508 aa		4.79	□□□□□ -1.64
CPNE8-208	ENST00000551855	ZC3H6	P61129	1189 aa	Known RBP	4.79	□□□□□ -1.64
CPNE8-208	ENST00000551855	ENOX2	Q16206	610 aa	Known RBP	4.79	□□□□□ -1.64
CPNE8-208	ENST00000551855	TIGD5	Q53EQ6	642 aa		4.79	□□□□□ -1.64
CPNE8-208	ENST00000551855	TMC4	Q7Z404	712 aa		4.79	□□□□□ -1.64
CPNE8-208	ENST00000551855	MFSD2A	Q8NA29	543 aa		4.79	□□□□□ -1.64
CPNE8-208	ENST00000551855	SREK1	Q8WXA9	508 aa	Known RBP	4.79	□□□□□ -1.64
CPNE8-208	ENST00000551855	DMRTB1	Q96MA1	342 aa		4.79	□□□□□ -1.64
CPNE8-208	ENST00000551855	DRC1	Q96MC2	740 aa		4.79	□□□□□ -1.64
CPNE8-208	ENST00000551855	C8orf37	Q96NL8	207 aa		4.79	□□□□□ -1.64
CPNE8-208	ENST00000551855	ACBD3	Q9H3P7	528 aa		4.79	□□□□□ -1.64
CPNE8-208	ENST00000551855	CELA3A	P09093	270 aa		4.78	□□□□□ -1.64
CPNE8-208	ENST00000551855	CAP2	P40123	477 aa		4.78	□□□□□ -1.64
CPNE8-208	ENST00000551855	DLG4	P78352	724 aa		4.78	□□□□□ -1.64
CPNE8-208	ENST00000551855	FANCC	Q00597	558 aa		4.78	□□□□□ -1.64
CPNE8-208	ENST00000551855	PRAMEF13	Q5VWM6	474 aa		4.78	□□□□□ -1.64
CPNE8-208	ENST00000551855	ZNF605	Q86T29	641 aa		4.78	□□□□□ -1.64
CPNE8-208	ENST00000551855	CREG2	Q8IUH2	290 aa		4.78	□□□□□ -1.64
CPNE8-208	ENST00000551855	BAHD1	Q8TBE0	780 aa	Predicted RBP	4.78	□□□□□ -1.64
CPNE8-208	ENST00000551855	KCNC2	Q96PR1	638 aa		4.78	□□□□□ -1.64
CPNE8-208	ENST00000551855	SGPP1	Q9BX95	441 aa		4.78	□□□□□ -1.64
CPNE8-208	ENST00000551855	MRS2	Q9HD23	443 aa		4.78	□□□□□ -1.64
CPNE8-208	ENST00000551855	TRIM13	O60858	407 aa		4.77	□□□□□ -1.65
CPNE8-208	ENST00000551855	LRRC14	Q15048	493 aa		4.77	□□□□□ -1.65
CPNE8-208	ENST00000551855	ZNF394	Q53GI3	561 aa		4.77	□□□□□ -1.65
CPNE8-208	ENST00000551855	FAM177A1	Q8N128	213 aa	Predicted RBP	4.77	□□□□□ -1.65
CPNE8-208	ENST00000551855		Q96M66	194 aa		4.77	□□□□□ -1.65
CPNE8-208	ENST00000551855	OSBPL7	Q9BZF2	842 aa		4.77	□□□□□ -1.65
CPNE8-208	ENST00000551855	DUSP15	Q9H1R2	295 aa	Predicted RBP	4.77	□□□□□ -1.65
CPNE8-208	ENST00000551855	GCM1	Q9NP62	436 aa		4.77	□□□□□ -1.65
CPNE8-208	ENST00000551855	PCDHGB7	Q9Y5F8	929 aa		4.77	□□□□□ -1.65
CPNE8-208	ENST00000551855	CST3	P01034	146 aa	Predicted RBP	4.76	□□□□□ -1.65
CPNE8-208	ENST00000551855	ZGLP1	P0C6A0	271 aa		4.76	□□□□□ -1.65
CPNE8-208	ENST00000551855	TPP2	P29144	1249 aa	Predicted RBP	4.76	□□□□□ -1.65
CPNE8-208	ENST00000551855	ETF1	P62495	437 aa	Known RBP	4.76	□□□□□ -1.65
CPNE8-208	ENST00000551855	PCNX4	Q63HM2	1172 aa		4.76	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms