RNA–Protein interactions for RNA: ENST00000551425.1

PTCH1-222, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 241 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-222ENST00000551425 THEGQ9P2T0 379 aa14.76□□□□□ -0.05
PTCH1-222ENST00000551425 TACC3Q9Y6A5 838 aa14.76□□□□□ -0.05
PTCH1-222ENST00000551425 USP17L15C9J2P7 530 aa14.75□□□□□ -0.05
PTCH1-222ENST00000551425 USP17L13C9JLJ4 530 aa14.75□□□□□ -0.05
PTCH1-222ENST00000551425 USP17L11C9JVI0 530 aa14.75□□□□□ -0.05
PTCH1-222ENST00000551425 USP17L18D6R9N7 530 aa14.75□□□□□ -0.05
PTCH1-222ENST00000551425 USP17L22D6RA61 530 aa14.75□□□□□ -0.05
PTCH1-222ENST00000551425 USP17L17D6RBQ6 530 aa14.75□□□□□ -0.05
PTCH1-222ENST00000551425 USP17L19D6RCP7 530 aa14.75□□□□□ -0.05
PTCH1-222ENST00000551425 USP17L20D6RJB6 530 aa14.75□□□□□ -0.05
PTCH1-222ENST00000551425 SEPT4O43236 478 aa14.75□□□□□ -0.05
PTCH1-222ENST00000551425 GDF11O95390 407 aa14.75□□□□□ -0.05
PTCH1-222ENST00000551425 ADCYAP1R1P41586 468 aa14.75□□□□□ -0.05
PTCH1-222ENST00000551425 TLE2Q04725 743 aa14.75□□□□□ -0.05
PTCH1-222ENST00000551425 USP17L24Q0WX57 530 aa14.75□□□□□ -0.05
PTCH1-222ENST00000551425 MVPQ14764 893 aaKnown RBP14.75□□□□□ -0.05
PTCH1-222ENST00000551425 AKNAD1Q5T1N1 836 aa14.75□□□□□ -0.05
PTCH1-222ENST00000551425 WDR78Q5VTH9 848 aa14.75□□□□□ -0.05
PTCH1-222ENST00000551425 SH3RF3Q8TEJ3 882 aaPredicted RBP14.75□□□□□ -0.05
PTCH1-222ENST00000551425 KIAA0355O15063 1070 aa14.74□□□□□ -0.05
PTCH1-222ENST00000551425 MRPS5P82675 430 aaKnown RBP14.74□□□□□ -0.05
PTCH1-222ENST00000551425 CATSPERGQ6ZRH7 1159 aa14.74□□□□□ -0.05
PTCH1-222ENST00000551425 TIFAQ96CG3 184 aa14.74□□□□□ -0.05
PTCH1-222ENST00000551425 XAGE2Q96GT9 111 aa14.74□□□□□ -0.05
PTCH1-222ENST00000551425 UHRF1Q96T88 793 aaPredicted RBP14.74□□□□□ -0.05
PTCH1-222ENST00000551425 COPRSQ9NQ92 184 aa14.74□□□□□ -0.05
PTCH1-222ENST00000551425 HMG20BQ9P0W2 317 aa14.74□□□□□ -0.05
PTCH1-222ENST00000551425 BTBD7Q9P203 1132 aa14.74□□□□□ -0.05
PTCH1-222ENST00000551425 ARIH1Q9Y4X5 557 aaPredicted RBP14.74□□□□□ -0.05
PTCH1-222ENST00000551425 SIPA1L1O43166 1804 aa14.73□□□□□ -0.05
PTCH1-222ENST00000551425 A0A1B0GUL7 405 aa14.73□□□□□ -0.05
PTCH1-222ENST00000551425 CLTBP09497 229 aa14.73□□□□□ -0.05
PTCH1-222ENST00000551425 FPGSQ05932 587 aa14.73□□□□□ -0.05
PTCH1-222ENST00000551425 LRRC41Q15345 812 aa14.73□□□□□ -0.05
PTCH1-222ENST00000551425 ANO1Q5XXA6 986 aa14.73□□□□□ -0.05
PTCH1-222ENST00000551425 TBC1D9Q6ZT07 1266 aa14.73□□□□□ -0.05
PTCH1-222ENST00000551425 CRACR2BQ8N4Y2 399 aaPredicted RBP14.73□□□□□ -0.05
PTCH1-222ENST00000551425 SPATA5Q8NB90 893 aa14.73□□□□□ -0.05
PTCH1-222ENST00000551425 FERMT2Q96AC1 680 aa14.73□□□□□ -0.05
PTCH1-222ENST00000551425 GAS2L1Q99501 681 aaPredicted RBP14.73□□□□□ -0.05
PTCH1-222ENST00000551425 TRIM34Q9BYJ4 488 aa14.73□□□□□ -0.05
PTCH1-222ENST00000551425 RAI14Q9P0K7 980 aa14.73□□□□□ -0.05
PTCH1-222ENST00000551425 PA2G4Q9UQ80 394 aaKnown RBP14.73□□□□□ -0.05
PTCH1-222ENST00000551425 AKAP2Q9Y2D5 859 aa14.73□□□□□ -0.05
PTCH1-222ENST00000551425 SYNGAP1Q96PV0 1343 aa14.72□□□□□ -0.05
PTCH1-222ENST00000551425 STRNO43815 780 aa14.72□□□□□ -0.05
PTCH1-222ENST00000551425 UBTFL1P0CB47 393 aaPredicted RBP14.72□□□□□ -0.05
PTCH1-222ENST00000551425 RAG1P15918 1043 aa14.72□□□□□ -0.05
PTCH1-222ENST00000551425 PLCG2P16885 1265 aa14.72□□□□□ -0.05
PTCH1-222ENST00000551425 PI16Q6UXB8 463 aa14.72□□□□□ -0.05
PTCH1-222ENST00000551425 DPP9Q86TI2 863 aa14.72□□□□□ -0.05
PTCH1-222ENST00000551425 NOL10Q9BSC4 688 aaKnown RBP14.72□□□□□ -0.05
PTCH1-222ENST00000551425 C1QTNF1Q9BXJ1 281 aa14.72□□□□□ -0.05
PTCH1-222ENST00000551425 PHF24Q9UPV7 400 aa14.72□□□□□ -0.05
PTCH1-222ENST00000551425 FLT1P17948 1338 aa14.71□□□□□ -0.05
PTCH1-222ENST00000551425 CHD9Q3L8U1 2897 aa14.71□□□□□ -0.05
PTCH1-222ENST00000551425 BAG3O95817 575 aa14.71□□□□□ -0.05
PTCH1-222ENST00000551425 MYCNP04198 464 aaPredicted RBP14.71□□□□□ -0.05
PTCH1-222ENST00000551425 ADORA2AP29274 412 aa14.71□□□□□ -0.05
PTCH1-222ENST00000551425 USP14P54578 494 aa14.71□□□□□ -0.05
PTCH1-222ENST00000551425 PPP4CP60510 307 aa14.71□□□□□ -0.05
PTCH1-222ENST00000551425 TGFBRAP1Q8WUH2 860 aa14.71□□□□□ -0.05
PTCH1-222ENST00000551425 PPM1EQ8WY54 764 aa14.71□□□□□ -0.05
PTCH1-222ENST00000551425 FEZ1Q99689 392 aa14.71□□□□□ -0.05
PTCH1-222ENST00000551425 KIAA1683Q9H0B3 1180 aa14.71□□□□□ -0.05
PTCH1-222ENST00000551425 PALD1Q9ULE6 856 aa14.71□□□□□ -0.05
PTCH1-222ENST00000551425 SPDYE16A6NNV3 312 aaPredicted RBP14.7□□□□□ -0.06
PTCH1-222ENST00000551425 GH2P01242 217 aa14.7□□□□□ -0.06
PTCH1-222ENST00000551425 VCAM1P19320 739 aa14.7□□□□□ -0.06
PTCH1-222ENST00000551425 ZYXQ15942 572 aaKnown RBP14.7□□□□□ -0.06
PTCH1-222ENST00000551425 FAM47AQ5JRC9 791 aa14.7□□□□□ -0.06
PTCH1-222ENST00000551425 MAPKAPK5Q8IW41 473 aa14.7□□□□□ -0.06
PTCH1-222ENST00000551425 ZNF236Q9UL36 1845 aa14.7□□□□□ -0.06
PTCH1-222ENST00000551425 NCOR1O75376 2440 aa14.7□□□□□ -0.06
PTCH1-222ENST00000551425 ARID4AP29374 1257 aaPredicted RBP14.69□□□□□ -0.06
PTCH1-222ENST00000551425 TFCP2Q12800 502 aa14.69□□□□□ -0.06
PTCH1-222ENST00000551425 ATF7IPQ6VMQ6 1270 aa14.69□□□□□ -0.06
PTCH1-222ENST00000551425 IL27Q8NEV9 243 aa14.69□□□□□ -0.06
PTCH1-222ENST00000551425 SSH1Q8WYL5 1049 aa14.69□□□□□ -0.06
PTCH1-222ENST00000551425 MOV10L1Q9BXT6 1211 aaKnown RBP14.69□□□□□ -0.06
PTCH1-222ENST00000551425 AATFQ9NY61 560 aaKnown RBP eCLIP14.69□□□□□ -0.06
PTCH1-222ENST00000551425 SLC5A4Q9NY91 659 aa14.69□□□□□ -0.06
PTCH1-222ENST00000551425 LRP2BPQ9P2M1 347 aa14.69□□□□□ -0.06
PTCH1-222ENST00000551425 HDAC5Q9UQL6 1122 aa14.69□□□□□ -0.06
PTCH1-222ENST00000551425 COBLO75128 1261 aa14.68□□□□□ -0.06
PTCH1-222ENST00000551425 HLA-DOAP06340 250 aa14.68□□□□□ -0.06
PTCH1-222ENST00000551425 PRAMEF19Q5SWL8 479 aa14.68□□□□□ -0.06
PTCH1-222ENST00000551425 TATDN1Q6P1N9 297 aa14.68□□□□□ -0.06
PTCH1-222ENST00000551425 ANKRD33Q7Z3H0 272 aa14.68□□□□□ -0.06
PTCH1-222ENST00000551425 SHCBP1Q8NEM2 672 aa14.68□□□□□ -0.06
PTCH1-222ENST00000551425 TOX2Q96NM4 488 aa14.68□□□□□ -0.06
PTCH1-222ENST00000551425 PBX4Q9BYU1 374 aa14.68□□□□□ -0.06
PTCH1-222ENST00000551425 PRDM12Q9H4Q4 367 aa14.68□□□□□ -0.06
PTCH1-222ENST00000551425 TMEM39AQ9NV64 488 aa14.68□□□□□ -0.06
PTCH1-222ENST00000551425 NRBP1Q9UHY1 535 aa14.68□□□□□ -0.06
PTCH1-222ENST00000551425 PQBP1O60828 265 aaKnown RBP14.67□□□□□ -0.06
PTCH1-222ENST00000551425 MCAMP43121 646 aa14.67□□□□□ -0.06
PTCH1-222ENST00000551425 FAAP100Q0VG06 881 aa14.67□□□□□ -0.06
PTCH1-222ENST00000551425 ADGRE1Q14246 886 aa14.67□□□□□ -0.06
PTCH1-222ENST00000551425 RASIP1Q5U651 963 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms