RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-208ENST00000551344 SLC44A5Q8NCS7 719 aa22.76■■□□□ 1.23
DDX54-208ENST00000551344 ARMC5Q96C12 935 aa22.76■■□□□ 1.23
DDX54-208ENST00000551344 FEZ1Q99689 392 aa22.76■■□□□ 1.23
DDX54-208ENST00000551344 SRRDQ9UH36 339 aa22.76■■□□□ 1.23
DDX54-208ENST00000551344 M0R2C6 588 aa22.75■■□□□ 1.23
DDX54-208ENST00000551344 IRX3P78415 501 aaPredicted RBP22.75■■□□□ 1.23
DDX54-208ENST00000551344 FAM110CQ1W6H9 321 aa22.75■■□□□ 1.23
DDX54-208ENST00000551344 NBPF11Q86T75 865 aa22.75■■□□□ 1.23
DDX54-208ENST00000551344 ANKRD13CQ8N6S4 541 aa22.75■■□□□ 1.23
DDX54-208ENST00000551344 PTCH2Q9Y6C5 1203 aa22.75■■□□□ 1.23
DDX54-208ENST00000551344 LOC285556D6RIA3 1793 aa22.74■■□□□ 1.23
DDX54-208ENST00000551344 ACER1Q8TDN7 264 aa22.74■■□□□ 1.23
DDX54-208ENST00000551344 P2RX7Q99572 595 aaKnown RBP22.74■■□□□ 1.23
DDX54-208ENST00000551344 SMIM22K7EJ46 135 aa22.73■■□□□ 1.23
DDX54-208ENST00000551344 ECM2O94769 699 aaPredicted RBP22.73■■□□□ 1.23
DDX54-208ENST00000551344 APPP05067 770 aa22.73■■□□□ 1.23
DDX54-208ENST00000551344 SOX10P56693 466 aa22.73■■□□□ 1.23
DDX54-208ENST00000551344 SEC62Q99442 399 aaKnown RBP22.73■■□□□ 1.23
DDX54-208ENST00000551344 NACAP1Q9BZK3 213 aa22.73■■□□□ 1.23
DDX54-208ENST00000551344 OSBPL3Q9H4L5 887 aa22.73■■□□□ 1.23
DDX54-208ENST00000551344 BAZ2AQ9UIF9 1905 aaKnown RBP22.72■■□□□ 1.23
DDX54-208ENST00000551344 USP17L15C9J2P7 530 aa22.72■■□□□ 1.23
DDX54-208ENST00000551344 USP17L13C9JLJ4 530 aa22.72■■□□□ 1.23
DDX54-208ENST00000551344 USP17L11C9JVI0 530 aa22.72■■□□□ 1.23
DDX54-208ENST00000551344 USP17L18D6R9N7 530 aa22.72■■□□□ 1.23
DDX54-208ENST00000551344 USP17L22D6RA61 530 aa22.72■■□□□ 1.23
DDX54-208ENST00000551344 USP17L17D6RBQ6 530 aa22.72■■□□□ 1.23
DDX54-208ENST00000551344 USP17L19D6RCP7 530 aa22.72■■□□□ 1.23
DDX54-208ENST00000551344 USP17L20D6RJB6 530 aa22.72■■□□□ 1.23
DDX54-208ENST00000551344 USP17L24Q0WX57 530 aa22.72■■□□□ 1.23
DDX54-208ENST00000551344 SLC9C1Q4G0N8 1177 aa22.72■■□□□ 1.23
DDX54-208ENST00000551344 IFNL3Q8IZI9 196 aa22.72■■□□□ 1.23
DDX54-208ENST00000551344 MINDY4BA8MYZ0 360 aa22.71■■□□□ 1.23
DDX54-208ENST00000551344 AKR1B1P15121 316 aa22.71■■□□□ 1.23
DDX54-208ENST00000551344 TDO2P48775 406 aa22.71■■□□□ 1.23
DDX54-208ENST00000551344 HERVK_113P62684 666 aa22.71■■□□□ 1.23
DDX54-208ENST00000551344 MLLT1Q03111 559 aaPredicted RBP22.71■■□□□ 1.23
DDX54-208ENST00000551344 ZYXQ15942 572 aaKnown RBP22.71■■□□□ 1.23
DDX54-208ENST00000551344 PLEKHM2Q8IWE5 1019 aa22.71■■□□□ 1.23
DDX54-208ENST00000551344 GTF3C2Q8WUA4 911 aaPredicted RBP22.71■■□□□ 1.23
DDX54-208ENST00000551344 MORF4L1Q9UBU8 362 aa22.71■■□□□ 1.23
DDX54-208ENST00000551344 CATSPERGQ6ZRH7 1159 aa22.7■■□□□ 1.22
DDX54-208ENST00000551344 RAET1EQ8TD07 263 aa22.7■■□□□ 1.22
DDX54-208ENST00000551344 ZNF287Q9HBT7 754 aa22.7■■□□□ 1.22
DDX54-208ENST00000551344 EPB41L4AQ9HCS5 686 aaPredicted RBP22.7■■□□□ 1.22
DDX54-208ENST00000551344 HELLSQ9NRZ9 838 aa22.7■■□□□ 1.22
DDX54-208ENST00000551344 MYPNQ86TC9 1320 aa22.7■■□□□ 1.22
DDX54-208ENST00000551344 A0A1W2PRG0 241 aa22.69■■□□□ 1.22
DDX54-208ENST00000551344 TNPO2O14787 897 aaKnown RBP22.69■■□□□ 1.22
DDX54-208ENST00000551344 VCAM1P19320 739 aa22.69■■□□□ 1.22
DDX54-208ENST00000551344 IRX6P78412 446 aaPredicted RBP22.69■■□□□ 1.22
DDX54-208ENST00000551344 SIAH1Q8IUQ4 282 aa22.69■■□□□ 1.22
DDX54-208ENST00000551344 COA7Q96BR5 231 aa22.69■■□□□ 1.22
DDX54-208ENST00000551344 ZNF333Q96JL9 665 aa22.69■■□□□ 1.22
DDX54-208ENST00000551344 KANSL2Q9H9L4 492 aa22.69■■□□□ 1.22
DDX54-208ENST00000551344 MKNK2Q9HBH9 465 aa22.69■■□□□ 1.22
DDX54-208ENST00000551344 ARHGEF10LQ9HCE6 1279 aa22.69■■□□□ 1.22
DDX54-208ENST00000551344 TRIM6-TRIM34B2RNG4 842 aa22.68■■□□□ 1.22
DDX54-208ENST00000551344 ICA1Q05084 483 aa22.68■■□□□ 1.22
DDX54-208ENST00000551344 PRKCZQ05513 592 aa22.68■■□□□ 1.22
DDX54-208ENST00000551344 GPRC5AQ8NFJ5 357 aa22.68■■□□□ 1.22
DDX54-208ENST00000551344 SH2D4AQ9H788 454 aa22.68■■□□□ 1.22
DDX54-208ENST00000551344 RBPJLQ9UBG7 517 aa22.68■■□□□ 1.22
DDX54-208ENST00000551344 TMX2Q9Y320 296 aa22.68■■□□□ 1.22
DDX54-208ENST00000551344 ROBO3Q96MS0 1386 aa22.67■■□□□ 1.22
DDX54-208ENST00000551344 NAPBQ9H115 298 aa22.67■■□□□ 1.22
DDX54-208ENST00000551344 ZSWIM8A7E2V4 1837 aa22.66■■□□□ 1.22
DDX54-208ENST00000551344 HTTP42858 3142 aa22.66■■□□□ 1.22
DDX54-208ENST00000551344 GRK4P32298 578 aa22.66■■□□□ 1.22
DDX54-208ENST00000551344 FLT3LGP49771 235 aa22.66■■□□□ 1.22
DDX54-208ENST00000551344 LPAR1Q92633 364 aa22.66■■□□□ 1.22
DDX54-208ENST00000551344 RILPL2Q969X0 211 aa22.66■■□□□ 1.22
DDX54-208ENST00000551344 TMEM106CQ9BVX2 250 aa22.66■■□□□ 1.22
DDX54-208ENST00000551344 RPAP3Q9H6T3 665 aaPredicted RBP22.66■■□□□ 1.22
DDX54-208ENST00000551344 TXNRD2Q9NNW7 524 aa22.66■■□□□ 1.22
DDX54-208ENST00000551344 GABRQQ9UN88 632 aa22.66■■□□□ 1.22
DDX54-208ENST00000551344 SLC3A2P08195 630 aaKnown RBP22.65■■□□□ 1.22
DDX54-208ENST00000551344 RASA1P20936 1047 aa22.65■■□□□ 1.22
DDX54-208ENST00000551344 IRF5Q13568 498 aa22.65■■□□□ 1.22
DDX54-208ENST00000551344 MCMDC2Q4G0Z9 681 aa22.65■■□□□ 1.22
DDX54-208ENST00000551344 LBX2Q6XYB7 198 aa22.65■■□□□ 1.22
DDX54-208ENST00000551344 ZNF444Q8N0Y2 327 aaPredicted RBP22.65■■□□□ 1.22
DDX54-208ENST00000551344 SH3TC2Q8TF17 1288 aa22.65■■□□□ 1.22
DDX54-208ENST00000551344 HOXC10Q9NYD6 342 aa22.65■■□□□ 1.22
DDX54-208ENST00000551344 RABGAP1Q9Y3P9 1069 aa22.65■■□□□ 1.22
DDX54-208ENST00000551344 EEF2P13639 858 aaKnown RBP22.64■■□□□ 1.21
DDX54-208ENST00000551344 ERVK-9P63128 1117 aa22.64■■□□□ 1.21
DDX54-208ENST00000551344 ERVK-24P63145 666 aa22.64■■□□□ 1.21
DDX54-208ENST00000551344 COG2Q14746 738 aa22.64■■□□□ 1.21
DDX54-208ENST00000551344 CCDC129Q6ZRS4 1044 aa22.64■■□□□ 1.21
DDX54-208ENST00000551344 STK11IPQ8N1F8 1099 aa22.64■■□□□ 1.21
DDX54-208ENST00000551344 SLAIN1Q8ND83 568 aa22.64■■□□□ 1.21
DDX54-208ENST00000551344 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.64■■□□□ 1.21
DDX54-208ENST00000551344 VCPKMTQ9H867 229 aa22.64■■□□□ 1.21
DDX54-208ENST00000551344 MGAMO43451 1857 aa22.63■■□□□ 1.21
DDX54-208ENST00000551344 PDE4BQ07343 736 aa22.63■■□□□ 1.21
DDX54-208ENST00000551344 Q3C1V9 767 aa22.63■■□□□ 1.21
DDX54-208ENST00000551344 POTEEQ6S8J3 1075 aa22.63■■□□□ 1.21
DDX54-208ENST00000551344 CLEC10AQ8IUN9 316 aa22.63■■□□□ 1.21
DDX54-208ENST00000551344 PXYLP1Q8TE99 480 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms