RNA–Protein interactions for RNA: ENST00000551245.5

TROAP-215, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 2,771 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-215ENST00000551245 ZKSCAN5Q9Y2L8 839 aa13.52□□□□□ -0.25
TROAP-215ENST00000551245 ARFGEF1Q9Y6D6 1849 aa13.51□□□□□ -0.25
TROAP-215ENST00000551245 NMT2O60551 498 aa13.51□□□□□ -0.25
TROAP-215ENST00000551245 GADD45BO75293 160 aaPredicted RBP13.51□□□□□ -0.25
TROAP-215ENST00000551245 FUT2Q10981 343 aa13.51□□□□□ -0.25
TROAP-215ENST00000551245 TRIM22Q8IYM9 498 aa13.51□□□□□ -0.25
TROAP-215ENST00000551245 RNF26Q9BY78 433 aaPredicted RBP13.51□□□□□ -0.25
TROAP-215ENST00000551245 CFAP45Q9UL16 551 aa13.51□□□□□ -0.25
TROAP-215ENST00000551245 COL2A1P02458 1487 aaPredicted RBP13.51□□□□□ -0.25
TROAP-215ENST00000551245 FIBPO43427 364 aa13.51□□□□□ -0.25
TROAP-215ENST00000551245 DEXIO95424 95 aa13.51□□□□□ -0.25
TROAP-215ENST00000551245 TSPY3P0CV98 308 aa13.51□□□□□ -0.25
TROAP-215ENST00000551245 TSPY8P0CW00 308 aa13.51□□□□□ -0.25
TROAP-215ENST00000551245 BRAPQ7Z569 592 aa13.51□□□□□ -0.25
TROAP-215ENST00000551245 ILDR1Q86SU0 546 aaPredicted RBP13.51□□□□□ -0.25
TROAP-215ENST00000551245 NUP133Q8WUM0 1156 aa13.51□□□□□ -0.25
TROAP-215ENST00000551245 GMLQ99445 158 aa13.51□□□□□ -0.25
TROAP-215ENST00000551245 EHD4Q9H223 541 aa13.51□□□□□ -0.25
TROAP-215ENST00000551245 SWAP70Q9UH65 585 aa13.51□□□□□ -0.25
TROAP-215ENST00000551245 PPFIA3O75145 1194 aa13.5□□□□□ -0.25
TROAP-215ENST00000551245 SLC4A8Q2Y0W8 1093 aa13.5□□□□□ -0.25
TROAP-215ENST00000551245 FAM173BQ6P4H8 233 aa13.5□□□□□ -0.25
TROAP-215ENST00000551245 RSBN1LQ6PCB5 846 aaPredicted RBP13.5□□□□□ -0.25
TROAP-215ENST00000551245 LARGE2Q8N3Y3 721 aa13.5□□□□□ -0.25
TROAP-215ENST00000551245 SLC44A5Q8NCS7 719 aa13.5□□□□□ -0.25
TROAP-215ENST00000551245 ZNF396Q96N95 335 aaPredicted RBP13.5□□□□□ -0.25
TROAP-215ENST00000551245 SLC26A6Q9BXS9 759 aa13.5□□□□□ -0.25
TROAP-215ENST00000551245 LEO1Q8WVC0 666 aaPredicted RBP13.5□□□□□ -0.25
TROAP-215ENST00000551245 ZNF277Q9NRM2 450 aaPredicted RBP13.5□□□□□ -0.25
TROAP-215ENST00000551245 UQCRHLA0A096LP55 91 aa13.49□□□□□ -0.25
TROAP-215ENST00000551245 PRPF3O43395 683 aaKnown RBP13.49□□□□□ -0.25
TROAP-215ENST00000551245 UQCRHP07919 91 aa13.49□□□□□ -0.25
TROAP-215ENST00000551245 GUCY1B3Q02153 619 aa13.49□□□□□ -0.25
TROAP-215ENST00000551245 KIF23Q02241 960 aaPredicted RBP13.49□□□□□ -0.25
TROAP-215ENST00000551245 TMTC3Q6ZXV5 915 aa13.49□□□□□ -0.25
TROAP-215ENST00000551245 KAT14Q9H8E8 782 aa13.49□□□□□ -0.25
TROAP-215ENST00000551245 ZNRF3Q9ULT6 936 aa13.49□□□□□ -0.25
TROAP-215ENST00000551245 PTGER2P43116 358 aa13.49□□□□□ -0.25
TROAP-215ENST00000551245 FOSBP53539 338 aa13.49□□□□□ -0.25
TROAP-215ENST00000551245 PICALMQ13492 652 aa13.49□□□□□ -0.25
TROAP-215ENST00000551245 KRT40Q6A162 431 aa13.49□□□□□ -0.25
TROAP-215ENST00000551245 KLHL34Q8N239 644 aa13.49□□□□□ -0.25
TROAP-215ENST00000551245 DHX36Q9H2U1 1008 aaKnown RBP13.49□□□□□ -0.25
TROAP-215ENST00000551245 RCOR1Q9UKL0 485 aa13.49□□□□□ -0.25
TROAP-215ENST00000551245 OTUD7BQ6GQQ9 843 aa13.49□□□□□ -0.25
TROAP-215ENST00000551245 RNF214Q8ND24 703 aa13.49□□□□□ -0.25
TROAP-215ENST00000551245 CTCFLQ8NI51 663 aaPredicted RBP13.49□□□□□ -0.25
TROAP-215ENST00000551245 SPATA32Q96LK8 384 aa13.49□□□□□ -0.25
TROAP-215ENST00000551245 AIFM3Q96NN9 605 aa13.49□□□□□ -0.25
TROAP-215ENST00000551245 CCDC39Q9UFE4 941 aa13.49□□□□□ -0.25
TROAP-215ENST00000551245 KIF5BP33176 963 aa13.48□□□□□ -0.25
TROAP-215ENST00000551245 TFIP11Q9UBB9 837 aaKnown RBP13.48□□□□□ -0.25
TROAP-215ENST00000551245 SERPINB13Q9UIV8 391 aa13.48□□□□□ -0.25
TROAP-215ENST00000551245 LTBP3Q9NS15 1303 aa13.48□□□□□ -0.25
TROAP-215ENST00000551245 IGKV6D-41A0A0C4DH26 115 aa13.48□□□□□ -0.25
TROAP-215ENST00000551245 HLA-DOAP06340 250 aa13.48□□□□□ -0.25
TROAP-215ENST00000551245 U2AF2P26368 475 aaKnown RBP eCLIP13.48□□□□□ -0.254e-12■■□□□ 13.8
TROAP-215ENST00000551245 NFIAQ12857 509 aa13.48□□□□□ -0.25
TROAP-215ENST00000551245 TRIM29Q14134 588 aa13.48□□□□□ -0.25
TROAP-215ENST00000551245 GRM4Q14833 912 aa13.48□□□□□ -0.25
TROAP-215ENST00000551245 NIM1KQ8IY84 436 aa13.48□□□□□ -0.25
TROAP-215ENST00000551245 PNMA1Q8ND90 353 aa13.48□□□□□ -0.25
TROAP-215ENST00000551245 SYAP1Q96A49 352 aaPredicted RBP13.48□□□□□ -0.25
TROAP-215ENST00000551245 MAP7D2Q96T17 732 aa13.48□□□□□ -0.25
TROAP-215ENST00000551245 FAM198AQ9UFP1 575 aa13.48□□□□□ -0.25
TROAP-215ENST00000551245 ATRNL1Q5VV63 1379 aa13.47□□□□□ -0.25
TROAP-215ENST00000551245 PSMD14O00487 310 aa13.47□□□□□ -0.25
TROAP-215ENST00000551245 ENTPD3O75355 529 aa13.47□□□□□ -0.25
TROAP-215ENST00000551245 GUCY1A2P33402 732 aa13.47□□□□□ -0.25
TROAP-215ENST00000551245 CFAP100Q494V2 611 aa13.47□□□□□ -0.25
TROAP-215ENST00000551245 AGBL3Q8NEM8 1001 aa13.47□□□□□ -0.25
TROAP-215ENST00000551245 TMEM47Q9BQJ4 181 aa13.47□□□□□ -0.25
TROAP-215ENST00000551245 GJB4Q9NTQ9 266 aa13.47□□□□□ -0.25
TROAP-215ENST00000551245 RTEL1Q9NZ71 1219 aa13.47□□□□□ -0.25
TROAP-215ENST00000551245 CNTNAP5Q8WYK1 1306 aa13.47□□□□□ -0.25
TROAP-215ENST00000551245 PLEKHA8P1O95397 391 aa13.47□□□□□ -0.25
TROAP-215ENST00000551245 MMP14P50281 582 aa13.47□□□□□ -0.25
TROAP-215ENST00000551245 METTL16Q86W50 562 aaKnown RBP13.47□□□□□ -0.25
TROAP-215ENST00000551245 MTMR14Q8NCE2 650 aa13.47□□□□□ -0.25
TROAP-215ENST00000551245 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.47□□□□□ -0.25
TROAP-215ENST00000551245 TAOK3Q9H2K8 898 aa13.47□□□□□ -0.25
TROAP-215ENST00000551245 PCDHAC2Q9Y5I4 1007 aa13.47□□□□□ -0.25
TROAP-215ENST00000551245 KIF28PB7ZC32 967 aa13.46□□□□□ -0.25
TROAP-215ENST00000551245 SHMT1P34896 483 aa13.46□□□□□ -0.25
TROAP-215ENST00000551245 GNAQP50148 359 aa13.46□□□□□ -0.25
TROAP-215ENST00000551245 RBM5P52756 815 aaKnown RBP eCLIP13.46□□□□□ -0.25
TROAP-215ENST00000551245 PKN1Q16512 942 aa13.46□□□□□ -0.25
TROAP-215ENST00000551245 MMP1P03956 469 aa13.46□□□□□ -0.26
TROAP-215ENST00000551245 TOP1P11387 765 aaKnown RBP13.46□□□□□ -0.26
TROAP-215ENST00000551245 AKAP17AQ02040 695 aaKnown RBP13.46□□□□□ -0.26
TROAP-215ENST00000551245 MYSM1Q5VVJ2 828 aa13.46□□□□□ -0.26
TROAP-215ENST00000551245 CMTR1Q8N1G2 835 aaKnown RBP13.46□□□□□ -0.26
TROAP-215ENST00000551245 SRBD1Q8N5C6 995 aaKnown RBP13.46□□□□□ -0.26
TROAP-215ENST00000551245 USP28Q96RU2 1077 aa13.46□□□□□ -0.26
TROAP-215ENST00000551245 LZTS2Q9BRK4 669 aa13.46□□□□□ -0.26
TROAP-215ENST00000551245 POLR3EQ9NVU0 708 aa13.46□□□□□ -0.26
TROAP-215ENST00000551245 HDAC9Q9UKV0 1011 aa13.46□□□□□ -0.26
TROAP-215ENST00000551245 UBE2Q2LH0YL09 131 aa13.45□□□□□ -0.26
TROAP-215ENST00000551245 RAD17O75943 681 aa13.45□□□□□ -0.26
TROAP-215ENST00000551245 ZFPM1Q8IX07 1006 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms