RNA–Protein interactions for RNA: ENST00000550891.4

SCN8A-206, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 3,253 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-206ENST00000550891 SCNN1DP51172 638 aa17.87■□□□□ 0.45
SCN8A-206ENST00000550891 USP17L1Q7RTZ2 530 aa17.87■□□□□ 0.45
SCN8A-206ENST00000550891 PPP6R2O75170 966 aa17.87■□□□□ 0.45
SCN8A-206ENST00000550891 LAMB1P07942 1786 aa17.87■□□□□ 0.45
SCN8A-206ENST00000550891 ANO6Q4KMQ2 910 aa17.87■□□□□ 0.45
SCN8A-206ENST00000550891 CAMKK2Q96RR4 588 aa17.87■□□□□ 0.45
SCN8A-206ENST00000550891 C16orf86Q6ZW13 317 aa17.87■□□□□ 0.45
SCN8A-206ENST00000550891 USP40Q9NVE5 1235 aa17.87■□□□□ 0.45
SCN8A-206ENST00000550891 LRRC37AA6NMS7 1700 aa17.86■□□□□ 0.45
SCN8A-206ENST00000550891 CAVIN2O95810 425 aa17.86■□□□□ 0.45
SCN8A-206ENST00000550891 CMA1P23946 247 aa17.86■□□□□ 0.45
SCN8A-206ENST00000550891 NOL7Q9UMY1 257 aaKnown RBP17.86■□□□□ 0.45
SCN8A-206ENST00000550891 RASA1P20936 1047 aa17.86■□□□□ 0.45
SCN8A-206ENST00000550891 NDUFA8P51970 172 aa17.86■□□□□ 0.45
SCN8A-206ENST00000550891 RBM5P52756 815 aaKnown RBP eCLIP17.86■□□□□ 0.45
SCN8A-206ENST00000550891 NR5A1Q13285 461 aa17.86■□□□□ 0.45
SCN8A-206ENST00000550891 RCSD1Q6JBY9 416 aa17.86■□□□□ 0.45
SCN8A-206ENST00000550891 RBM43Q6ZSC3 357 aaKnown RBP17.86■□□□□ 0.45
SCN8A-206ENST00000550891 RGS17Q9UGC6 210 aaPredicted RBP17.86■□□□□ 0.45
SCN8A-206ENST00000550891 MRVI1Q9Y6F6 885 aa17.86■□□□□ 0.45
SCN8A-206ENST00000550891 KIAA1551Q9HCM1 1747 aa17.86■□□□□ 0.45
SCN8A-206ENST00000550891 NRXN2Q9P2S2 1712 aa17.86■□□□□ 0.45
SCN8A-206ENST00000550891 NLRP5P59047 1200 aa17.85■□□□□ 0.45
SCN8A-206ENST00000550891 SNW1Q13573 536 aaKnown RBP17.85■□□□□ 0.45
SCN8A-206ENST00000550891 SRBD1Q8N5C6 995 aaKnown RBP17.85■□□□□ 0.45
SCN8A-206ENST00000550891 CABP5Q9NP86 173 aa17.85■□□□□ 0.45
SCN8A-206ENST00000550891 IL17RBQ9NRM6 502 aa17.85■□□□□ 0.45
SCN8A-206ENST00000550891 TCP11L1Q9NUJ3 509 aa17.85■□□□□ 0.45
SCN8A-206ENST00000550891 CERS5Q8N5B7 392 aa17.85■□□□□ 0.45
SCN8A-206ENST00000550891 ENGASEQ8NFI3 743 aa17.85■□□□□ 0.45
SCN8A-206ENST00000550891 PDLIM2Q96JY6 352 aa17.85■□□□□ 0.45
SCN8A-206ENST00000550891 MXD3Q9BW11 206 aa17.85■□□□□ 0.45
SCN8A-206ENST00000550891 ESPNB1AK53 854 aa17.85■□□□□ 0.45
SCN8A-206ENST00000550891 SCG2P13521 617 aa17.85■□□□□ 0.45
SCN8A-206ENST00000550891 MSNP26038 577 aaKnown RBP17.85■□□□□ 0.45
SCN8A-206ENST00000550891 FMR1NBQ8N0W7 255 aaPredicted RBP17.85■□□□□ 0.45
SCN8A-206ENST00000550891 CNTNAP5Q8WYK1 1306 aa17.84■□□□□ 0.45
SCN8A-206ENST00000550891 HLA-DOAP06340 250 aa17.84■□□□□ 0.45
SCN8A-206ENST00000550891 SYKP43405 635 aa17.84■□□□□ 0.45
SCN8A-206ENST00000550891 ZNF165P49910 485 aa17.84■□□□□ 0.45
SCN8A-206ENST00000550891 FUT2Q10981 343 aa17.84■□□□□ 0.45
SCN8A-206ENST00000550891 PKN1Q16512 942 aa17.84■□□□□ 0.45
SCN8A-206ENST00000550891 STX1AQ16623 288 aa17.84■□□□□ 0.45
SCN8A-206ENST00000550891 KRI1Q8N9T8 703 aaKnown RBP17.84■□□□□ 0.45
SCN8A-206ENST00000550891 MAP3K14Q99558 947 aa17.84■□□□□ 0.45
SCN8A-206ENST00000550891 CUTAO60888 179 aa17.84■□□□□ 0.45
SCN8A-206ENST00000550891 CC2D2BQ6DHV5 1058 aa17.84■□□□□ 0.45
SCN8A-206ENST00000550891 SUPT20HQ8NEM7 779 aa17.84■□□□□ 0.45
SCN8A-206ENST00000550891 ANKS1AQ92625 1134 aa17.84■□□□□ 0.45
SCN8A-206ENST00000550891 GOLGA6L19H0YKK7 550 aa17.83■□□□□ 0.45
SCN8A-206ENST00000550891 PFKFB1P16118 471 aa17.83■□□□□ 0.45
SCN8A-206ENST00000550891 HHIPL2Q6UWX4 724 aa17.83■□□□□ 0.45
SCN8A-206ENST00000550891 KIAA0825Q8IV33 1275 aa17.83■□□□□ 0.45
SCN8A-206ENST00000550891 CCDC39Q9UFE4 941 aa17.83■□□□□ 0.45
SCN8A-206ENST00000550891 ECE2O60344 883 aa17.83■□□□□ 0.44
SCN8A-206ENST00000550891 ZNF202O95125 648 aa17.83■□□□□ 0.44
SCN8A-206ENST00000550891 NEDD1Q8NHV4 660 aa17.83■□□□□ 0.44
SCN8A-206ENST00000550891 PHF20Q9BVI0 1012 aa17.83■□□□□ 0.44
SCN8A-206ENST00000550891 DNAJC25Q9H1X3 360 aa17.83■□□□□ 0.44
SCN8A-206ENST00000550891 ANO10Q9NW15 660 aa17.83■□□□□ 0.44
SCN8A-206ENST00000550891 NAV1Q8NEY1 1877 aa17.83■□□□□ 0.44
SCN8A-206ENST00000550891 TRIM75PA6NK02 468 aa17.83■□□□□ 0.44
SCN8A-206ENST00000550891 OXER1Q8TDS5 423 aa17.83■□□□□ 0.44
SCN8A-206ENST00000550891 TMEM47Q9BQJ4 181 aa17.83■□□□□ 0.44
SCN8A-206ENST00000550891 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.83■□□□□ 0.44
SCN8A-206ENST00000550891 FAM13BQ9NYF5 915 aa17.83■□□□□ 0.44
SCN8A-206ENST00000550891 TNS1Q9HBL0 1735 aaKnown RBP17.83■□□□□ 0.44
SCN8A-206ENST00000550891 ADCY5O95622 1261 aa17.82■□□□□ 0.44
SCN8A-206ENST00000550891 CALML3P27482 149 aa17.82■□□□□ 0.44
SCN8A-206ENST00000550891 PTPAQ15257 358 aa17.82■□□□□ 0.44
SCN8A-206ENST00000550891 HS1BP3Q53T59 392 aa17.82■□□□□ 0.44
SCN8A-206ENST00000550891 AXDND1Q5T1B0 1012 aaPredicted RBP17.82■□□□□ 0.44
SCN8A-206ENST00000550891 STRIP1Q5VSL9 837 aa17.82■□□□□ 0.44
SCN8A-206ENST00000550891 NAT10Q9H0A0 1025 aaKnown RBP17.82■□□□□ 0.44
SCN8A-206ENST00000550891 BECN2A8MW95 431 aa17.82■□□□□ 0.44
SCN8A-206ENST00000550891 WDHD1O75717 1129 aaPredicted RBP17.82■□□□□ 0.44
SCN8A-206ENST00000550891 CRKP46108 304 aa17.82■□□□□ 0.44
SCN8A-206ENST00000550891 GRM4Q14833 912 aa17.82■□□□□ 0.44
SCN8A-206ENST00000550891 PFKFB3Q16875 520 aaPredicted RBP17.82■□□□□ 0.44
SCN8A-206ENST00000550891 LUZP1Q86V48 1076 aa17.82■□□□□ 0.44
SCN8A-206ENST00000550891 LZTS2Q9BRK4 669 aa17.82■□□□□ 0.44
SCN8A-206ENST00000550891 SERPINB13Q9UIV8 391 aa17.82■□□□□ 0.44
SCN8A-206ENST00000550891 LTBP1Q14766 1721 aa17.81■□□□□ 0.44
SCN8A-206ENST00000550891 TOP1P11387 765 aaKnown RBP17.81■□□□□ 0.44
SCN8A-206ENST00000550891 TRIM34Q9BYJ4 488 aa17.81■□□□□ 0.44
SCN8A-206ENST00000550891 CBX8Q9HC52 389 aa17.81■□□□□ 0.44
SCN8A-206ENST00000550891 HOOK1Q9UJC3 728 aaKnown RBP17.81■□□□□ 0.44
SCN8A-206ENST00000550891 BMP15O95972 392 aa17.8■□□□□ 0.44
SCN8A-206ENST00000550891 PARP1P09874 1014 aaKnown RBP17.8■□□□□ 0.44
SCN8A-206ENST00000550891 AOC3Q16853 763 aa17.8■□□□□ 0.44
SCN8A-206ENST00000550891 CEP57L1Q8IYX8 460 aa17.8■□□□□ 0.44
SCN8A-206ENST00000550891 CLIC6Q96NY7 704 aa17.8■□□□□ 0.44
SCN8A-206ENST00000550891 RGPD3A6NKT7 1758 aaPredicted RBP17.8■□□□□ 0.44
SCN8A-206ENST00000550891 RGPD4Q7Z3J3 1758 aa17.8■□□□□ 0.44
SCN8A-206ENST00000550891 PPIP5K2O43314 1243 aa17.8■□□□□ 0.44
SCN8A-206ENST00000550891 CDC42EP5Q6NZY7 148 aa17.8■□□□□ 0.44
SCN8A-206ENST00000550891 ZSCAN30Q86W11 494 aa17.8■□□□□ 0.44
SCN8A-206ENST00000550891 ZSCAN29Q8IWY8 852 aaPredicted RBP17.8■□□□□ 0.44
SCN8A-206ENST00000550891 SWAP70Q9UH65 585 aa17.8■□□□□ 0.44
SCN8A-206ENST00000550891 PCDHB6Q9Y5E3 794 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms