RNA–Protein interactions for RNA: ENST00000550869.5

ERBB3-216, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 4

Gene ERBB3, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-216ENST00000550869 ZNF112Q9UJU3 913 aa14.33□□□□□ -0.12
ERBB3-216ENST00000550869 TAOK2Q9UL54 1235 aa14.33□□□□□ -0.12
ERBB3-216ENST00000550869 ATRNL1Q5VV63 1379 aa14.33□□□□□ -0.12
ERBB3-216ENST00000550869 ROBO3Q96MS0 1386 aa14.33□□□□□ -0.12
ERBB3-216ENST00000550869 SMIM22K7EJ46 135 aa14.32□□□□□ -0.12
ERBB3-216ENST00000550869 PLCD1P51178 756 aa14.32□□□□□ -0.12
ERBB3-216ENST00000550869 HAND2P61296 217 aa14.32□□□□□ -0.12
ERBB3-216ENST00000550869 CAP1Q01518 475 aa14.32□□□□□ -0.12
ERBB3-216ENST00000550869 GABPAQ06546 454 aa14.32□□□□□ -0.12
ERBB3-216ENST00000550869 COL9A3Q14050 684 aaPredicted RBP14.32□□□□□ -0.12
ERBB3-216ENST00000550869 NOL9Q5SY16 702 aaKnown RBP14.32□□□□□ -0.12
ERBB3-216ENST00000550869 AKNAD1Q5T1N1 836 aa14.32□□□□□ -0.12
ERBB3-216ENST00000550869 ANKRD23Q86SG2 305 aa14.32□□□□□ -0.12
ERBB3-216ENST00000550869 ZFPM1Q8IX07 1006 aa14.32□□□□□ -0.12
ERBB3-216ENST00000550869 KCNH4Q9UQ05 1017 aa14.32□□□□□ -0.12
ERBB3-216ENST00000550869 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.32□□□□□ -0.12
ERBB3-216ENST00000550869 PTCH2Q9Y6C5 1203 aa14.32□□□□□ -0.12
ERBB3-216ENST00000550869 CYP2D7A0A087X1C5 515 aa14.31□□□□□ -0.12
ERBB3-216ENST00000550869 CYP2D6P10635 497 aa14.31□□□□□ -0.12
ERBB3-216ENST00000550869 PSMA5P28066 241 aa14.31□□□□□ -0.12
ERBB3-216ENST00000550869 INPP5BP32019 993 aa14.31□□□□□ -0.12
ERBB3-216ENST00000550869 NT5C2P49902 561 aa14.31□□□□□ -0.12
ERBB3-216ENST00000550869 EXOSC10Q01780 885 aaKnown RBP14.31□□□□□ -0.12
ERBB3-216ENST00000550869 EVX2Q03828 476 aa14.31□□□□□ -0.12
ERBB3-216ENST00000550869 MIGA2Q7L4E1 593 aa14.31□□□□□ -0.12
ERBB3-216ENST00000550869 SH3BP5LQ7L8J4 393 aa14.31□□□□□ -0.12
ERBB3-216ENST00000550869 NEK1Q96PY6 1258 aa14.31□□□□□ -0.12
ERBB3-216ENST00000550869 ALDH8A1Q9H2A2 487 aaPredicted RBP14.31□□□□□ -0.12
ERBB3-216ENST00000550869 DHX36Q9H2U1 1008 aaKnown RBP14.31□□□□□ -0.12
ERBB3-216ENST00000550869 SIPA1L1O43166 1804 aa14.31□□□□□ -0.12
ERBB3-216ENST00000550869 ZSWIM8A7E2V4 1837 aa14.3□□□□□ -0.12
ERBB3-216ENST00000550869 MINDY4BA8MYZ0 360 aa14.3□□□□□ -0.12
ERBB3-216ENST00000550869 ORC4O43929 436 aa14.3□□□□□ -0.12
ERBB3-216ENST00000550869 HMGB1P09429 215 aaKnown RBP14.3□□□□□ -0.12
ERBB3-216ENST00000550869 CTDSPL2Q05D32 466 aa14.3□□□□□ -0.12
ERBB3-216ENST00000550869 C17orf99Q6UX52 265 aa14.3□□□□□ -0.12
ERBB3-216ENST00000550869 RUFY3Q7L099 469 aa14.3□□□□□ -0.12
ERBB3-216ENST00000550869 TTC6Q86TZ1 520 aa14.3□□□□□ -0.12
ERBB3-216ENST00000550869 MB21D2Q8IYB1 491 aaPredicted RBP14.3□□□□□ -0.12
ERBB3-216ENST00000550869 FBXL16Q8N461 479 aa14.3□□□□□ -0.12
ERBB3-216ENST00000550869 NKX2-3Q8TAU0 364 aa14.3□□□□□ -0.12
ERBB3-216ENST00000550869 JAKMIP1Q96N16 626 aaKnown RBP14.3□□□□□ -0.12
ERBB3-216ENST00000550869 TTC14Q96N46 770 aa14.3□□□□□ -0.12
ERBB3-216ENST00000550869 EHD4Q9H223 541 aa14.3□□□□□ -0.12
ERBB3-216ENST00000550869 RNF41Q9H4P4 317 aaPredicted RBP14.3□□□□□ -0.12
ERBB3-216ENST00000550869 DDTLA6NHG4 134 aaPredicted RBP14.29□□□□□ -0.12
ERBB3-216ENST00000550869 CXCL11O14625 94 aa14.29□□□□□ -0.12
ERBB3-216ENST00000550869 POLR3DP05423 398 aaPredicted RBP14.29□□□□□ -0.12
ERBB3-216ENST00000550869 EN2P19622 333 aaPredicted RBP14.29□□□□□ -0.12
ERBB3-216ENST00000550869 MAP3K10Q02779 954 aa14.29□□□□□ -0.12
ERBB3-216ENST00000550869 TCP10Q12799 353 aa14.29□□□□□ -0.12
ERBB3-216ENST00000550869 PICALMQ13492 652 aa14.29□□□□□ -0.12
ERBB3-216ENST00000550869 MFSD6Q6ZSS7 791 aa14.29□□□□□ -0.12
ERBB3-216ENST00000550869 C16orf86Q6ZW13 317 aa14.29□□□□□ -0.12
ERBB3-216ENST00000550869 DHX32Q7L7V1 743 aaKnown RBP14.29□□□□□ -0.12
ERBB3-216ENST00000550869 NCOA7Q8NI08 942 aa14.29□□□□□ -0.12
ERBB3-216ENST00000550869 SNX21Q969T3 373 aa14.29□□□□□ -0.12
ERBB3-216ENST00000550869 AGXT2Q9BYV1 514 aa14.29□□□□□ -0.12
ERBB3-216ENST00000550869 INCENPQ9NQS7 918 aa14.29□□□□□ -0.12
ERBB3-216ENST00000550869 PI4KBQ9UBF8 816 aa14.29□□□□□ -0.12
ERBB3-216ENST00000550869 SAP30BPQ9UHR5 308 aaKnown RBP14.29□□□□□ -0.12
ERBB3-216ENST00000550869 WDR19Q8NEZ3 1342 aa14.29□□□□□ -0.12
ERBB3-216ENST00000550869 PDHXO00330 501 aa14.28□□□□□ -0.12
ERBB3-216ENST00000550869 SLC3A2P08195 630 aaKnown RBP14.28□□□□□ -0.12
ERBB3-216ENST00000550869 CASTP20810 708 aaKnown RBP14.28□□□□□ -0.12
ERBB3-216ENST00000550869 RPS6KB1P23443 525 aa14.28□□□□□ -0.12
ERBB3-216ENST00000550869 HOXD10P28358 340 aa14.28□□□□□ -0.12
ERBB3-216ENST00000550869 NEDD4P46934 1319 aa14.28□□□□□ -0.12
ERBB3-216ENST00000550869 DOCK1Q14185 1865 aa14.28□□□□□ -0.12
ERBB3-216ENST00000550869 SLC4A8Q2Y0W8 1093 aa14.28□□□□□ -0.12
ERBB3-216ENST00000550869 BLOC1S2Q6QNY1 142 aa14.28□□□□□ -0.12
ERBB3-216ENST00000550869 FOXP4Q8IVH2 680 aaPredicted RBP14.28□□□□□ -0.12
ERBB3-216ENST00000550869 AMOTL1Q8IY63 956 aa14.28□□□□□ -0.12
ERBB3-216ENST00000550869 ADGRA2Q96PE1 1338 aa14.28□□□□□ -0.12
ERBB3-216ENST00000550869 PARK7Q99497 189 aaKnown RBP14.28□□□□□ -0.12
ERBB3-216ENST00000550869 MTA3Q9BTC8 594 aa14.28□□□□□ -0.12
ERBB3-216ENST00000550869 KRT23Q9C075 422 aa14.28□□□□□ -0.12
ERBB3-216ENST00000550869 CNNM2Q9H8M5 875 aa14.28□□□□□ -0.12
ERBB3-216ENST00000550869 PTPRFP10586 1907 aa14.27□□□□□ -0.12
ERBB3-216ENST00000550869 MGAMO43451 1857 aa14.27□□□□□ -0.12
ERBB3-216ENST00000550869 NEK4P51957 841 aa14.27□□□□□ -0.13
ERBB3-216ENST00000550869 FASTKD5Q7L8L6 764 aaKnown RBP14.27□□□□□ -0.13
ERBB3-216ENST00000550869 DYNLL2Q96FJ2 89 aa14.27□□□□□ -0.13
ERBB3-216ENST00000550869 UPF3BQ9BZI7 483 aaKnown RBP14.27□□□□□ -0.13
ERBB3-216ENST00000550869 ARHGAP39Q9C0H5 1083 aa14.27□□□□□ -0.13
ERBB3-216ENST00000550869 PICK1Q9NRD5 415 aa14.27□□□□□ -0.13
ERBB3-216ENST00000550869 ZSWIM5Q9P217 1185 aa14.27□□□□□ -0.13
ERBB3-216ENST00000550869 SRRDQ9UH36 339 aa14.27□□□□□ -0.13
ERBB3-216ENST00000550869 SERPINB13Q9UIV8 391 aa14.27□□□□□ -0.13
ERBB3-216ENST00000550869 CYP46A1Q9Y6A2 500 aa14.27□□□□□ -0.13
ERBB3-216ENST00000550869 PHF20L1A8MW92 1017 aa14.26□□□□□ -0.13
ERBB3-216ENST00000550869 B4E1Z4 1266 aa14.26□□□□□ -0.13
ERBB3-216ENST00000550869 TBC1D12O60347 775 aa14.26□□□□□ -0.13
ERBB3-216ENST00000550869 CD2BP2O95400 341 aaKnown RBP14.26□□□□□ -0.13
ERBB3-216ENST00000550869 HLA-DOAP06340 250 aa14.26□□□□□ -0.13
ERBB3-216ENST00000550869 CPA1P15085 419 aa14.26□□□□□ -0.13
ERBB3-216ENST00000550869 PSMC4P43686 418 aa14.26□□□□□ -0.13
ERBB3-216ENST00000550869 CDK8P49336 464 aa14.26□□□□□ -0.13
ERBB3-216ENST00000550869 ANTXR2P58335 489 aa14.26□□□□□ -0.13
ERBB3-216ENST00000550869 PDE4BQ07343 736 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms