RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 FRMPD2Q68DX3 1309 aaPredicted RBP13.74□□□□□ -0.21
NR4A1-215ENST00000550557 EIF3JO75822 258 aaKnown RBP13.74□□□□□ -0.21
NR4A1-215ENST00000550557 TXKP42681 527 aa13.74□□□□□ -0.21
NR4A1-215ENST00000550557 SMIM5Q71RC9 77 aa13.74□□□□□ -0.21
NR4A1-215ENST00000550557 BRAPQ7Z569 592 aa13.74□□□□□ -0.21
NR4A1-215ENST00000550557 HACE1Q8IYU2 909 aa13.74□□□□□ -0.21
NR4A1-215ENST00000550557 TTC12Q9H892 705 aaPredicted RBP13.74□□□□□ -0.21
NR4A1-215ENST00000550557 KANSL2Q9H9L4 492 aa13.74□□□□□ -0.21
NR4A1-215ENST00000550557 H0YHG0 523 aa13.73□□□□□ -0.21
NR4A1-215ENST00000550557 GCOM1H8Y6P7 765 aaPredicted RBP13.73□□□□□ -0.21
NR4A1-215ENST00000550557 POLR2MP0CAP2 368 aa13.73□□□□□ -0.21
NR4A1-215ENST00000550557 CTNNA2P26232 953 aa13.73□□□□□ -0.21
NR4A1-215ENST00000550557 FAM200AQ8TCP9 573 aa13.73□□□□□ -0.21
NR4A1-215ENST00000550557 MRPS27Q92552 414 aaKnown RBP13.73□□□□□ -0.21
NR4A1-215ENST00000550557 CAVIN2O95810 425 aa13.73□□□□□ -0.21
NR4A1-215ENST00000550557 CPLX3Q8WVH0 158 aa13.73□□□□□ -0.21
NR4A1-215ENST00000550557 TRPC6Q9Y210 931 aa13.73□□□□□ -0.21
NR4A1-215ENST00000550557 SETD1BQ9UPS6 1966 aaKnown RBP13.73□□□□□ -0.21
NR4A1-215ENST00000550557 NEMFO60524 1076 aa13.73□□□□□ -0.21
NR4A1-215ENST00000550557 STRN3Q13033 797 aa13.73□□□□□ -0.21
NR4A1-215ENST00000550557 CELF1Q92879 486 aaKnown RBP13.73□□□□□ -0.21
NR4A1-215ENST00000550557 CGNQ9P2M7 1197 aaKnown RBP13.73□□□□□ -0.21
NR4A1-215ENST00000550557 PTPRUQ92729 1446 aa13.73□□□□□ -0.21
NR4A1-215ENST00000550557 APOBEC3FQ8IUX4 373 aaKnown RBP13.73□□□□□ -0.21
NR4A1-215ENST00000550557 VWA3AA6NCI4 1184 aa13.72□□□□□ -0.21
NR4A1-215ENST00000550557 YEATS4O95619 227 aa13.72□□□□□ -0.21
NR4A1-215ENST00000550557 ZNF165P49910 485 aa13.72□□□□□ -0.21
NR4A1-215ENST00000550557 TERF1P54274 439 aa13.72□□□□□ -0.21
NR4A1-215ENST00000550557 RILPL1Q5EBL4 403 aa13.72□□□□□ -0.21
NR4A1-215ENST00000550557 TBC1D5Q92609 795 aa13.72□□□□□ -0.21
NR4A1-215ENST00000550557 ZSCAN10Q96SZ4 725 aaPredicted RBP13.72□□□□□ -0.21
NR4A1-215ENST00000550557 CCDC65Q8IXS2 484 aa13.72□□□□□ -0.21
NR4A1-215ENST00000550557 IQUBQ8NA54 791 aa13.72□□□□□ -0.21
NR4A1-215ENST00000550557 NCOA3Q9Y6Q9 1424 aa13.72□□□□□ -0.21
NR4A1-215ENST00000550557 H7C1W4 665 aa13.72□□□□□ -0.21
NR4A1-215ENST00000550557 POLA2Q14181 598 aa13.72□□□□□ -0.21
NR4A1-215ENST00000550557 ZNF354CQ86Y25 554 aa13.72□□□□□ -0.21
NR4A1-215ENST00000550557 FOXP4Q8IVH2 680 aaPredicted RBP13.72□□□□□ -0.21
NR4A1-215ENST00000550557 SP8Q8IXZ3 490 aa13.72□□□□□ -0.21
NR4A1-215ENST00000550557 RGS12O14924 1447 aa13.72□□□□□ -0.21
NR4A1-215ENST00000550557 SFPQP23246 707 aaKnown RBP eCLIP13.71□□□□□ -0.21
NR4A1-215ENST00000550557 STX1AQ16623 288 aa13.71□□□□□ -0.21
NR4A1-215ENST00000550557 ZNF654Q8IZM8 581 aa13.71□□□□□ -0.21
NR4A1-215ENST00000550557 FNBP1Q96RU3 617 aa13.71□□□□□ -0.21
NR4A1-215ENST00000550557 ADD3Q9UEY8 706 aaKnown RBP13.71□□□□□ -0.21
NR4A1-215ENST00000550557 DBNLQ9UJU6 430 aaKnown RBP13.71□□□□□ -0.21
NR4A1-215ENST00000550557 MINPP1Q9UNW1 487 aa13.71□□□□□ -0.21
NR4A1-215ENST00000550557 KLRF2D3W0D1 207 aa13.71□□□□□ -0.21
NR4A1-215ENST00000550557 CCDC117Q8IWD4 279 aaPredicted RBP13.71□□□□□ -0.21
NR4A1-215ENST00000550557 CDAN1Q8IWY9 1227 aa13.71□□□□□ -0.21
NR4A1-215ENST00000550557 CCDC97Q96F63 343 aaPredicted RBP13.71□□□□□ -0.21
NR4A1-215ENST00000550557 CD209Q9NNX6 404 aa13.71□□□□□ -0.21
NR4A1-215ENST00000550557 ADGRB2O60241 1585 aa13.71□□□□□ -0.21
NR4A1-215ENST00000550557 N4BP3O15049 544 aa13.71□□□□□ -0.21
NR4A1-215ENST00000550557 DYNLL1P63167 89 aaKnown RBP13.71□□□□□ -0.21
NR4A1-215ENST00000550557 SKIDA1Q1XH10 827 aa13.71□□□□□ -0.21
NR4A1-215ENST00000550557 SV2BQ7L1I2 683 aa13.71□□□□□ -0.21
NR4A1-215ENST00000550557 DIS3L2Q8IYB7 885 aaKnown RBP13.71□□□□□ -0.21
NR4A1-215ENST00000550557 RNF169Q8NCN4 708 aa13.71□□□□□ -0.21
NR4A1-215ENST00000550557 STK24Q9Y6E0 443 aa13.71□□□□□ -0.21
NR4A1-215ENST00000550557 hCG_1642624A0A1W2PR95 340 aa13.71□□□□□ -0.22
NR4A1-215ENST00000550557 GAS7O60861 476 aa13.71□□□□□ -0.22
NR4A1-215ENST00000550557 ASNSP08243 561 aa13.71□□□□□ -0.22
NR4A1-215ENST00000550557 CRKP46108 304 aa13.71□□□□□ -0.22
NR4A1-215ENST00000550557 BMS1Q14692 1282 aaKnown RBP13.71□□□□□ -0.22
NR4A1-215ENST00000550557 KIF18AQ8NI77 898 aa13.71□□□□□ -0.22
NR4A1-215ENST00000550557 MTFR1LQ9H019 292 aa13.71□□□□□ -0.22
NR4A1-215ENST00000550557 TDRD3Q9H7E2 651 aaKnown RBP13.71□□□□□ -0.22
NR4A1-215ENST00000550557 PSTPIP2Q9H939 334 aa13.71□□□□□ -0.22
NR4A1-215ENST00000550557 NCOA5Q9HCD5 579 aaKnown RBP13.71□□□□□ -0.22
NR4A1-215ENST00000550557 SMCO2A6NFE2 343 aa13.7□□□□□ -0.22
NR4A1-215ENST00000550557 BIRC3Q13489 604 aa13.7□□□□□ -0.22
NR4A1-215ENST00000550557 ANO6Q4KMQ2 910 aa13.7□□□□□ -0.22
NR4A1-215ENST00000550557 MCTP2Q6DN12 878 aa13.7□□□□□ -0.22
NR4A1-215ENST00000550557 METTL13Q8N6R0 699 aa13.7□□□□□ -0.22
NR4A1-215ENST00000550557 TMEM63CQ9P1W3 806 aa13.7□□□□□ -0.22
NR4A1-215ENST00000550557 ZNRF3Q9ULT6 936 aa13.7□□□□□ -0.22
NR4A1-215ENST00000550557 E7EWF7 191 aa13.7□□□□□ -0.22
NR4A1-215ENST00000550557 PLCD1P51178 756 aa13.7□□□□□ -0.22
NR4A1-215ENST00000550557 RICTORQ6R327 1708 aa13.7□□□□□ -0.22
NR4A1-215ENST00000550557 MAEAQ7L5Y9 396 aa13.7□□□□□ -0.22
NR4A1-215ENST00000550557 UIMC1Q96RL1 719 aa13.7□□□□□ -0.22
NR4A1-215ENST00000550557 WRNIP1Q96S55 665 aa13.7□□□□□ -0.22
NR4A1-215ENST00000550557 FERMT1Q9BQL6 677 aa13.7□□□□□ -0.22
NR4A1-215ENST00000550557 ZHX1Q9UKY1 873 aaPredicted RBP13.7□□□□□ -0.22
NR4A1-215ENST00000550557 MRVI1Q9Y6F6 885 aa13.7□□□□□ -0.22
NR4A1-215ENST00000550557 TNKSO95271 1327 aa13.7□□□□□ -0.22
NR4A1-215ENST00000550557 KIF20BQ96Q89 1820 aa13.7□□□□□ -0.22
NR4A1-215ENST00000550557 POTEB2H3BUK9 544 aa13.7□□□□□ -0.22
NR4A1-215ENST00000550557 GOLGA8HP0CJ92 632 aa13.7□□□□□ -0.22
NR4A1-215ENST00000550557 PCP11498 1178 aaKnown RBP13.7□□□□□ -0.22
NR4A1-215ENST00000550557 CTNNBL1Q8WYA6 563 aaPredicted RBP13.7□□□□□ -0.22
NR4A1-215ENST00000550557 GTPBP4Q9BZE4 634 aaKnown RBP13.7□□□□□ -0.22
NR4A1-215ENST00000550557 IQCEQ6IPM2 695 aa13.7□□□□□ -0.22
NR4A1-215ENST00000550557 ZNF341Q9BYN7 854 aa13.7□□□□□ -0.22
NR4A1-215ENST00000550557 DACT1Q9NYF0 836 aa13.7□□□□□ -0.22
NR4A1-215ENST00000550557 HACL1Q9UJ83 578 aa13.7□□□□□ -0.22
NR4A1-215ENST00000550557 CACNB3P54284 484 aa13.69□□□□□ -0.22
NR4A1-215ENST00000550557 GPATCH4Q5T3I0 446 aaKnown RBP13.69□□□□□ -0.22
NR4A1-215ENST00000550557 SEC62Q99442 399 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms