RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 ANTXR1Q9H6X2 564 aa28■■■□□ 2.07
SMARCD1-209ENST00000550477 HMMRO75330 724 aa27.99■■■□□ 2.07
SMARCD1-209ENST00000550477 TRIM32Q13049 653 aa27.99■■■□□ 2.07
SMARCD1-209ENST00000550477 SHROOM1Q2M3G4 852 aaPredicted RBP27.99■■■□□ 2.07
SMARCD1-209ENST00000550477 RHPN1Q8TCX5 695 aa27.99■■■□□ 2.07
SMARCD1-209ENST00000550477 DIS3LQ8TF46 1054 aaKnown RBP27.99■■■□□ 2.07
SMARCD1-209ENST00000550477 CRNKL1Q9BZJ0 848 aaKnown RBP27.99■■■□□ 2.07
SMARCD1-209ENST00000550477 OGDHLQ9ULD0 1010 aa27.99■■■□□ 2.07
SMARCD1-209ENST00000550477 NDUFB9Q9Y6M9 179 aa27.99■■■□□ 2.07
SMARCD1-209ENST00000550477 SLC9C2Q5TAH2 1124 aa27.98■■■□□ 2.07
SMARCD1-209ENST00000550477 MAP3K21Q5TCX8 1036 aa27.98■■■□□ 2.07
SMARCD1-209ENST00000550477 KIAA1683Q9H0B3 1180 aa27.98■■■□□ 2.07
SMARCD1-209ENST00000550477 CHMP4BQ9H444 224 aaKnown RBP27.98■■■□□ 2.07
SMARCD1-209ENST00000550477 IFIT2P09913 472 aaKnown RBP27.97■■■□□ 2.07
SMARCD1-209ENST00000550477 WDR78Q5VTH9 848 aa27.97■■■□□ 2.07
SMARCD1-209ENST00000550477 CATSPERGQ6ZRH7 1159 aa27.97■■■□□ 2.07
SMARCD1-209ENST00000550477 RPAP2Q8IXW5 612 aaPredicted RBP27.97■■■□□ 2.07
SMARCD1-209ENST00000550477 KIF1BPQ96EK5 621 aa27.97■■■□□ 2.07
SMARCD1-209ENST00000550477 APBA2Q99767 749 aa27.97■■■□□ 2.07
SMARCD1-209ENST00000550477 IL1RAPL2Q9NP60 686 aa27.97■■■□□ 2.07
SMARCD1-209ENST00000550477 STAP2Q9UGK3 403 aa27.97■■■□□ 2.07
SMARCD1-209ENST00000550477 IVNS1ABPQ9Y6Y0 642 aa27.97■■■□□ 2.07
SMARCD1-209ENST00000550477 PEX10O60683 326 aa27.96■■■□□ 2.07
SMARCD1-209ENST00000550477 MORN1Q5T089 497 aa27.96■■■□□ 2.07
SMARCD1-209ENST00000550477 C7orf61Q8IZ16 206 aa27.96■■■□□ 2.07
SMARCD1-209ENST00000550477 PANK1Q8TE04 598 aa27.96■■■□□ 2.07
SMARCD1-209ENST00000550477 EDC3Q96F86 508 aaKnown RBP27.96■■■□□ 2.07
SMARCD1-209ENST00000550477 PORCNQ9H237 461 aa27.96■■■□□ 2.07
SMARCD1-209ENST00000550477 MAP2K5Q13163 448 aa27.95■■■□□ 2.06
SMARCD1-209ENST00000550477 MIER1Q8N108 512 aa27.95■■■□□ 2.06
SMARCD1-209ENST00000550477 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.95■■■□□ 2.06
SMARCD1-209ENST00000550477 USP6NLQ92738 828 aa27.95■■■□□ 2.06
SMARCD1-209ENST00000550477 RIOK1Q9BRS2 568 aaKnown RBP27.95■■■□□ 2.06
SMARCD1-209ENST00000550477 MCM9Q9NXL9 1143 aa27.95■■■□□ 2.06
SMARCD1-209ENST00000550477 PLXNB2O15031 1838 aa27.95■■■□□ 2.06
SMARCD1-209ENST00000550477 CACNB2Q08289 660 aaPredicted RBP27.94■■■□□ 2.06
SMARCD1-209ENST00000550477 MFSD14CQ5VZR4 134 aa27.94■■■□□ 2.06
SMARCD1-209ENST00000550477 ZBED9Q6R2W3 1325 aa27.93■■■□□ 2.06
SMARCD1-209ENST00000550477 MPHOSPH10O00566 681 aaKnown RBP27.93■■■□□ 2.06
SMARCD1-209ENST00000550477 VCAM1P19320 739 aa27.93■■■□□ 2.06
SMARCD1-209ENST00000550477 PLCD1P51178 756 aa27.93■■■□□ 2.06
SMARCD1-209ENST00000550477 DDX19BQ9UMR2 479 aa27.93■■■□□ 2.06
SMARCD1-209ENST00000550477 SLC15A5A6NIM6 579 aa27.92■■■□□ 2.06
SMARCD1-209ENST00000550477 APBB1O00213 710 aa27.92■■■□□ 2.06
SMARCD1-209ENST00000550477 PDE6AP16499 860 aa27.92■■■□□ 2.06
SMARCD1-209ENST00000550477 BMP8BP34820 402 aa27.92■■■□□ 2.06
SMARCD1-209ENST00000550477 SHMT1P34896 483 aa27.92■■■□□ 2.06
SMARCD1-209ENST00000550477 LBX2Q6XYB7 198 aa27.92■■■□□ 2.06
SMARCD1-209ENST00000550477 DNAJC2Q99543 621 aaKnown RBP27.92■■■□□ 2.06
SMARCD1-209ENST00000550477 HOXC10Q9NYD6 342 aa27.92■■■□□ 2.06
SMARCD1-209ENST00000550477 RAB11FIP3O75154 756 aa27.91■■■□□ 2.06
SMARCD1-209ENST00000550477 DIEXFQ68CQ4 756 aaKnown RBP27.91■■■□□ 2.06
SMARCD1-209ENST00000550477 RPAP3Q9H6T3 665 aaPredicted RBP27.91■■■□□ 2.06
SMARCD1-209ENST00000550477 GOLIM4O00461 696 aa27.9■■■□□ 2.06
SMARCD1-209ENST00000550477 ATP2B2Q01814 1243 aa27.9■■■□□ 2.06
SMARCD1-209ENST00000550477 AMOTL1Q8IY63 956 aa27.9■■■□□ 2.06
SMARCD1-209ENST00000550477 ACER1Q8TDN7 264 aa27.9■■■□□ 2.06
SMARCD1-209ENST00000550477 BCL11AQ9H165 835 aa27.9■■■□□ 2.06
SMARCD1-209ENST00000550477 SWAP70Q9UH65 585 aa27.9■■■□□ 2.06
SMARCD1-209ENST00000550477 ZMYND8Q9ULU4 1186 aaPredicted RBP27.9■■■□□ 2.06
SMARCD1-209ENST00000550477 ZNF532Q9HCE3 1301 aa27.9■■■□□ 2.06
SMARCD1-209ENST00000550477 MSCO60682 206 aa27.89■■■□□ 2.06
SMARCD1-209ENST00000550477 PTPREP23469 700 aa27.89■■■□□ 2.06
SMARCD1-209ENST00000550477 COG2Q14746 738 aa27.89■■■□□ 2.06
SMARCD1-209ENST00000550477 SEPT2Q15019 361 aa27.89■■■□□ 2.06
SMARCD1-209ENST00000550477 CCL14Q16627 93 aa27.89■■■□□ 2.06
SMARCD1-209ENST00000550477 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.89■■■□□ 2.06
SMARCD1-209ENST00000550477 CCND3P30281 292 aaPredicted RBP27.88■■■□□ 2.05
SMARCD1-209ENST00000550477 GABPAQ06546 454 aa27.88■■■□□ 2.05
SMARCD1-209ENST00000550477 DDX60LQ5H9U9 1706 aaKnown RBP27.88■■■□□ 2.05
SMARCD1-209ENST00000550477 DDRGK1Q96HY6 314 aa27.88■■■□□ 2.05
SMARCD1-209ENST00000550477 GDF15Q99988 308 aa27.88■■■□□ 2.05
SMARCD1-209ENST00000550477 CNMDO75829 334 aa27.87■■■□□ 2.05
SMARCD1-209ENST00000550477 MNX1P50219 401 aaPredicted RBP27.87■■■□□ 2.05
SMARCD1-209ENST00000550477 TMEM179Q6ZVK1 233 aa27.87■■■□□ 2.05
SMARCD1-209ENST00000550477 ALPK3Q96L96 1907 aa27.86■■■□□ 2.05
SMARCD1-209ENST00000550477 SPDYE16A6NNV3 312 aaPredicted RBP27.86■■■□□ 2.05
SMARCD1-209ENST00000550477 STRNO43815 780 aa27.86■■■□□ 2.05
SMARCD1-209ENST00000550477 CNGA1P29973 690 aa27.86■■■□□ 2.05
SMARCD1-209ENST00000550477 LHX8Q68G74 356 aa27.86■■■□□ 2.05
SMARCD1-209ENST00000550477 DPP9Q86TI2 863 aa27.86■■■□□ 2.05
SMARCD1-209ENST00000550477 TANGO6Q9C0B7 1094 aa27.86■■■□□ 2.05
SMARCD1-209ENST00000550477 SH2D4AQ9H788 454 aa27.86■■■□□ 2.05
SMARCD1-209ENST00000550477 ARHGEF10LQ9HCE6 1279 aa27.86■■■□□ 2.05
SMARCD1-209ENST00000550477 DCP1AQ9NPI6 582 aaPredicted RBP27.86■■■□□ 2.05
SMARCD1-209ENST00000550477 ATP8A2Q9NTI2 1148 aa27.86■■■□□ 2.05
SMARCD1-209ENST00000550477 SLC5A4Q9NY91 659 aa27.86■■■□□ 2.05
SMARCD1-209ENST00000550477 SYN1P17600 705 aa27.85■■■□□ 2.05
SMARCD1-209ENST00000550477 POTEEQ6S8J3 1075 aa27.85■■■□□ 2.05
SMARCD1-209ENST00000550477 SDR42E1Q8WUS8 393 aa27.85■■■□□ 2.05
SMARCD1-209ENST00000550477 PAG1Q9NWQ8 432 aa27.85■■■□□ 2.05
SMARCD1-209ENST00000550477 BTBD7Q9P203 1132 aa27.85■■■□□ 2.05
SMARCD1-209ENST00000550477 HOXC6P09630 235 aa27.84■■■□□ 2.05
SMARCD1-209ENST00000550477 GUCY1A2P33402 732 aa27.84■■■□□ 2.05
SMARCD1-209ENST00000550477 GRB14Q14449 540 aa27.84■■■□□ 2.05
SMARCD1-209ENST00000550477 MB21D1Q8N884 522 aa27.84■■■□□ 2.05
SMARCD1-209ENST00000550477 LPAR1Q92633 364 aa27.84■■■□□ 2.05
SMARCD1-209ENST00000550477 NAV1Q8NEY1 1877 aa27.84■■■□□ 2.05
SMARCD1-209ENST00000550477 LCORLQ8N3X6 602 aa27.83■■■□□ 2.05
SMARCD1-209ENST00000550477 CCDC17Q96LX7 622 aa27.83■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms