RNA–Protein interactions for RNA: ENST00000549525.1

COX6A1-202, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

Gene COX6A1, Length 767 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-202ENST00000549525 ATG3Q9NT62 314 aa8.34□□□□□ -1.07
COX6A1-202ENST00000549525 FOXD3Q9UJU5 478 aaPredicted RBP8.34□□□□□ -1.07
COX6A1-202ENST00000549525 BRPF3Q9ULD4 1205 aa8.34□□□□□ -1.07
COX6A1-202ENST00000549525 MRC1P22897 1456 aa8.33□□□□□ -1.08
COX6A1-202ENST00000549525 SCN11AQ9UI33 1791 aa8.33□□□□□ -1.08
COX6A1-202ENST00000549525 IGHA2P01877 340 aa8.33□□□□□ -1.08
COX6A1-202ENST00000549525 EIF4A1P60842 406 aaKnown RBP8.33□□□□□ -1.08
COX6A1-202ENST00000549525 ATP11AP98196 1134 aa8.33□□□□□ -1.08
COX6A1-202ENST00000549525 HYAL2Q12891 473 aa8.33□□□□□ -1.08
COX6A1-202ENST00000549525 CCDC30Q5VVM6 783 aa8.33□□□□□ -1.08
COX6A1-202ENST00000549525 TTC9Q92623 222 aa8.33□□□□□ -1.08
COX6A1-202ENST00000549525 ASAP1Q9ULH1 1129 aa8.33□□□□□ -1.08
COX6A1-202ENST00000549525 PALLDQ8WX93 1383 aa8.33□□□□□ -1.08
COX6A1-202ENST00000549525 DLG5Q8TDM6 1919 aa8.33□□□□□ -1.08
COX6A1-202ENST00000549525 BRWD3Q6RI45 1802 aa8.32□□□□□ -1.08
COX6A1-202ENST00000549525 EP400Q96L91 3159 aa8.32□□□□□ -1.08
COX6A1-202ENST00000549525 KRBA1A5PL33 1030 aa8.32□□□□□ -1.08
COX6A1-202ENST00000549525 PIK3R2O00459 728 aa8.32□□□□□ -1.08
COX6A1-202ENST00000549525 ITGB2P05107 769 aa8.32□□□□□ -1.08
COX6A1-202ENST00000549525 EHHADHQ08426 723 aa8.32□□□□□ -1.08
COX6A1-202ENST00000549525 SLC39A6Q13433 755 aa8.32□□□□□ -1.08
COX6A1-202ENST00000549525 TRMT2AQ8IZ69 625 aaKnown RBP8.32□□□□□ -1.08
COX6A1-202ENST00000549525 TTC16Q8NEE8 873 aa8.32□□□□□ -1.08
COX6A1-202ENST00000549525 ZNF496Q96IT1 587 aaPredicted RBP8.32□□□□□ -1.08
COX6A1-202ENST00000549525 FAM129BQ96TA1 746 aa8.32□□□□□ -1.08
COX6A1-202ENST00000549525 STK31Q9BXU1 1019 aa8.32□□□□□ -1.08
COX6A1-202ENST00000549525 MIS18AQ9NYP9 233 aa8.32□□□□□ -1.08
COX6A1-202ENST00000549525 NOP53Q9NZM5 478 aaKnown RBP8.32□□□□□ -1.08
COX6A1-202ENST00000549525 SALL4Q9UJQ4 1053 aa8.32□□□□□ -1.08
COX6A1-202ENST00000549525 CCNL1Q9UK58 526 aaPredicted RBP8.32□□□□□ -1.08
COX6A1-202ENST00000549525 ADAMTS7Q9UKP4 1686 aa8.32□□□□□ -1.08
COX6A1-202ENST00000549525 SHANK3Q9BYB0 1731 aa8.32□□□□□ -1.08
COX6A1-202ENST00000549525 FANCIQ9NVI1 1328 aa8.31□□□□□ -1.08
COX6A1-202ENST00000549525 FAM229AH3BQW9 127 aa8.31□□□□□ -1.08
COX6A1-202ENST00000549525 EREGO14944 169 aa8.31□□□□□ -1.08
COX6A1-202ENST00000549525 NDUFB5O43674 189 aa8.31□□□□□ -1.08
COX6A1-202ENST00000549525 GHRHP01286 108 aa8.31□□□□□ -1.08
COX6A1-202ENST00000549525 PDIA4P13667 645 aaKnown RBP8.31□□□□□ -1.08
COX6A1-202ENST00000549525 ACPPP15309 386 aa8.31□□□□□ -1.08
COX6A1-202ENST00000549525 CES1P23141 567 aa8.31□□□□□ -1.08
COX6A1-202ENST00000549525 TWISTNBQ3B726 338 aaPredicted RBP8.31□□□□□ -1.08
COX6A1-202ENST00000549525 DUSP27Q5VZP5 1158 aa8.31□□□□□ -1.08
COX6A1-202ENST00000549525 ADAMTSL4Q6UY14 1074 aa8.31□□□□□ -1.08
COX6A1-202ENST00000549525 CEP120Q8N960 986 aa8.31□□□□□ -1.08
COX6A1-202ENST00000549525 FLAD1Q8NFF5 587 aa8.31□□□□□ -1.08
COX6A1-202ENST00000549525 SNX29Q8TEQ0 813 aa8.31□□□□□ -1.08
COX6A1-202ENST00000549525 HEG1Q9ULI3 1381 aa8.31□□□□□ -1.08
COX6A1-202ENST00000549525 ALDH1L2Q3SY69 923 aa8.3□□□□□ -1.08
COX6A1-202ENST00000549525 TSR2Q969E8 191 aaKnown RBP8.3□□□□□ -1.08
COX6A1-202ENST00000549525 RASSF4Q9H2L5 321 aa8.3□□□□□ -1.08
COX6A1-202ENST00000549525 HYPKQ9NX55 129 aa8.3□□□□□ -1.08
COX6A1-202ENST00000549525 DBF4Q9UBU7 674 aaPredicted RBP8.3□□□□□ -1.08
COX6A1-202ENST00000549525 BIN2Q9UBW5 565 aaPredicted RBP8.3□□□□□ -1.08
COX6A1-202ENST00000549525 TRIM33Q9UPN9 1127 aa8.3□□□□□ -1.08
COX6A1-202ENST00000549525 NHSQ6T4R5 1651 aa8.3□□□□□ -1.08
COX6A1-202ENST00000549525 A0A087WZG4 1122 aa8.29□□□□□ -1.08
COX6A1-202ENST00000549525 GPR182O15218 404 aa8.29□□□□□ -1.08
COX6A1-202ENST00000549525 IPO8O15397 1037 aaKnown RBP8.29□□□□□ -1.08
COX6A1-202ENST00000549525 PHACTR2O75167 634 aa8.29□□□□□ -1.08
COX6A1-202ENST00000549525 EXOSC9Q06265 439 aaKnown RBP8.29□□□□□ -1.08
COX6A1-202ENST00000549525 TXNRD1Q16881 649 aa8.29□□□□□ -1.08
COX6A1-202ENST00000549525 MSL1Q68DK7 614 aa8.29□□□□□ -1.08
COX6A1-202ENST00000549525 NCAPG2Q86XI2 1143 aa8.29□□□□□ -1.08
COX6A1-202ENST00000549525 KCTD17Q8N5Z5 321 aa8.29□□□□□ -1.08
COX6A1-202ENST00000549525 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.29□□□□□ -1.08
COX6A1-202ENST00000549525 ITGB4P16144 1822 aa8.29□□□□□ -1.08
COX6A1-202ENST00000549525 DOT1LQ8TEK3 1739 aa8.29□□□□□ -1.08
COX6A1-202ENST00000549525 ELL2O00472 640 aaPredicted RBP8.28□□□□□ -1.08
COX6A1-202ENST00000549525 VAMP4O75379 141 aa8.28□□□□□ -1.08
COX6A1-202ENST00000549525 DDX58O95786 925 aaKnown RBP8.28□□□□□ -1.08
COX6A1-202ENST00000549525 EIF2S2P20042 333 aaKnown RBP8.28□□□□□ -1.08
COX6A1-202ENST00000549525 GDF6Q6KF10 455 aaPredicted RBP8.28□□□□□ -1.08
COX6A1-202ENST00000549525 ALYREFQ86V81 257 aaKnown RBP8.28□□□□□ -1.08
COX6A1-202ENST00000549525 DMRTC2Q8IXT2 367 aaPredicted RBP8.28□□□□□ -1.08
COX6A1-202ENST00000549525 CITED4Q96RK1 184 aa8.28□□□□□ -1.08
COX6A1-202ENST00000549525 CAMKK2Q96RR4 588 aa8.28□□□□□ -1.08
COX6A1-202ENST00000549525 RBCK1Q9BYM8 510 aa8.28□□□□□ -1.08
COX6A1-202ENST00000549525 RBSNQ9H1K0 784 aa8.28□□□□□ -1.08
COX6A1-202ENST00000549525 ZFYVE28Q9HCC9 887 aa8.28□□□□□ -1.08
COX6A1-202ENST00000549525 SBF2Q86WG5 1849 aa8.27□□□□□ -1.09
COX6A1-202ENST00000549525 A0A0A0MRY4 1105 aa8.27□□□□□ -1.09
COX6A1-202ENST00000549525 NFKBIEO00221 500 aa8.27□□□□□ -1.09
COX6A1-202ENST00000549525 KCNQ3O43525 872 aa8.27□□□□□ -1.09
COX6A1-202ENST00000549525 CYP19A1P11511 503 aaPredicted RBP8.27□□□□□ -1.09
COX6A1-202ENST00000549525 IL6STP40189 918 aaPredicted RBP8.27□□□□□ -1.09
COX6A1-202ENST00000549525 ORC1Q13415 861 aa8.27□□□□□ -1.09
COX6A1-202ENST00000549525 PLA2G4EQ3MJ16 856 aa8.27□□□□□ -1.09
COX6A1-202ENST00000549525 TRAPPC3LQ5T215 181 aa8.27□□□□□ -1.09
COX6A1-202ENST00000549525 C8orf58Q8NAV2 365 aa8.27□□□□□ -1.09
COX6A1-202ENST00000549525 SPACA7Q96KW9 195 aa8.27□□□□□ -1.09
COX6A1-202ENST00000549525 HHIPQ96QV1 700 aa8.27□□□□□ -1.09
COX6A1-202ENST00000549525 PBX4Q9BYU1 374 aa8.27□□□□□ -1.09
COX6A1-202ENST00000549525 DDX21Q9NR30 783 aaKnown RBP eCLIP8.27□□□□□ -1.09
COX6A1-202ENST00000549525 PPP4R2Q9NY27 417 aa8.27□□□□□ -1.09
COX6A1-202ENST00000549525 STK32BQ9NY57 414 aa8.27□□□□□ -1.09
COX6A1-202ENST00000549525 TFCP2L1Q9NZI6 479 aa8.27□□□□□ -1.09
COX6A1-202ENST00000549525 SIPA1L3O60292 1781 aaPredicted RBP8.27□□□□□ -1.09
COX6A1-202ENST00000549525 KIF16BQ96L93 1317 aa8.27□□□□□ -1.09
COX6A1-202ENST00000549525 CNTNAP4Q9C0A0 1308 aa8.27□□□□□ -1.09
COX6A1-202ENST00000549525 SPDYE3A6NKU9 549 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms