RNA–Protein interactions for RNA: ENST00000549414.6

CUX1-213, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-213ENST00000549414 SH2B2O14492 632 aaPredicted RBP18.32■□□□□ 0.52
CUX1-213ENST00000549414 DIXDC1Q155Q3 683 aa18.32■□□□□ 0.52
CUX1-213ENST00000549414 KRBA2Q6ZNG9 492 aa18.32■□□□□ 0.52
CUX1-213ENST00000549414 GRAMD1CQ8IYS0 662 aa18.32■□□□□ 0.52
CUX1-213ENST00000549414 LRRC47Q8N1G4 583 aaKnown RBP18.32■□□□□ 0.52
CUX1-213ENST00000549414 LARGE2Q8N3Y3 721 aa18.32■□□□□ 0.52
CUX1-213ENST00000549414 FERMT2Q96AC1 680 aa18.32■□□□□ 0.52
CUX1-213ENST00000549414 STRBPQ96SI9 672 aaKnown RBP18.32■□□□□ 0.52
CUX1-213ENST00000549414 ZNF408Q9H9D4 720 aa18.32■□□□□ 0.52
CUX1-213ENST00000549414 LRWD1Q9UFC0 647 aa18.32■□□□□ 0.52
CUX1-213ENST00000549414 FRMPD2Q68DX3 1309 aaPredicted RBP18.32■□□□□ 0.52
CUX1-213ENST00000549414 BICDL2A1A5D9 508 aa18.32■□□□□ 0.52
CUX1-213ENST00000549414 KIF5AQ12840 1032 aa18.32■□□□□ 0.52
CUX1-213ENST00000549414 ATG9AQ7Z3C6 839 aa18.32■□□□□ 0.52
CUX1-213ENST00000549414 TBC1D10CQ8IV04 446 aa18.32■□□□□ 0.52
CUX1-213ENST00000549414 CHMP2AO43633 222 aa18.32■□□□□ 0.52
CUX1-213ENST00000549414 PTGDRQ13258 359 aa18.32■□□□□ 0.52
CUX1-213ENST00000549414 TBC1D7Q9P0N9 293 aa18.32■□□□□ 0.52
CUX1-213ENST00000549414 SMCO2A6NFE2 343 aa18.31■□□□□ 0.52
CUX1-213ENST00000549414 NOC4LQ9BVI4 516 aaKnown RBP18.31■□□□□ 0.52
CUX1-213ENST00000549414 KLRF2D3W0D1 207 aa18.31■□□□□ 0.52
CUX1-213ENST00000549414 ZNF500O60304 480 aaPredicted RBP18.31■□□□□ 0.52
CUX1-213ENST00000549414 SCG2P13521 617 aa18.31■□□□□ 0.52
CUX1-213ENST00000549414 SP4Q02446 784 aa18.31■□□□□ 0.52
CUX1-213ENST00000549414 USH1GQ495M9 461 aa18.31■□□□□ 0.52
CUX1-213ENST00000549414 STOX1Q6ZVD7 989 aa18.31■□□□□ 0.52
CUX1-213ENST00000549414 KIAA0825Q8IV33 1275 aa18.31■□□□□ 0.52
CUX1-213ENST00000549414 SNX29Q8TEQ0 813 aa18.31■□□□□ 0.52
CUX1-213ENST00000549414 ISCA1Q9BUE6 129 aa18.31■□□□□ 0.52
CUX1-213ENST00000549414 USP40Q9NVE5 1235 aa18.31■□□□□ 0.52
CUX1-213ENST00000549414 MAP2P11137 1827 aaKnown RBP18.31■□□□□ 0.52
CUX1-213ENST00000549414 RIMBP3CA6NJZ7 1639 aa18.31■□□□□ 0.52
CUX1-213ENST00000549414 RIMBP3BA6NNM3 1639 aa18.31■□□□□ 0.52
CUX1-213ENST00000549414 H0YIN7 160 aa18.31■□□□□ 0.52
CUX1-213ENST00000549414 PPLO60437 1756 aa18.31■□□□□ 0.52
CUX1-213ENST00000549414 KRT9P35527 623 aa18.31■□□□□ 0.52
CUX1-213ENST00000549414 BTDP43251 543 aa18.31■□□□□ 0.52
CUX1-213ENST00000549414 BAG6P46379 1132 aa18.31■□□□□ 0.52
CUX1-213ENST00000549414 REXO1Q8N1G1 1221 aaKnown RBP18.31■□□□□ 0.52
CUX1-213ENST00000549414 MYRIPQ8NFW9 859 aa18.31■□□□□ 0.52
CUX1-213ENST00000549414 RIMBP3Q9UFD9 1639 aa18.31■□□□□ 0.52
CUX1-213ENST00000549414 PALLDQ8WX93 1383 aa18.31■□□□□ 0.52
CUX1-213ENST00000549414 KCNQ2O43526 872 aa18.31■□□□□ 0.52
CUX1-213ENST00000549414 CETN1Q12798 172 aa18.31■□□□□ 0.52
CUX1-213ENST00000549414 BLIDQ8IZY5 108 aa18.31■□□□□ 0.52
CUX1-213ENST00000549414 KRT222Q8N1A0 295 aa18.31■□□□□ 0.52
CUX1-213ENST00000549414 COL3A1P02461 1466 aaPredicted RBP18.3■□□□□ 0.52
CUX1-213ENST00000549414 SOS2Q07890 1332 aaPredicted RBP18.3■□□□□ 0.52
CUX1-213ENST00000549414 CYP19A1P11511 503 aaPredicted RBP18.3■□□□□ 0.52
CUX1-213ENST00000549414 U2AF2P26368 475 aaKnown RBP eCLIP18.3■□□□□ 0.521e-7■■■■■ 27.9
CUX1-213ENST00000549414 CARD6Q9BX69 1037 aa18.3■□□□□ 0.52
CUX1-213ENST00000549414 DNAJC5Q9H3Z4 198 aa18.3■□□□□ 0.52
CUX1-213ENST00000549414 DIP2AQ14689 1571 aa18.3■□□□□ 0.52
CUX1-213ENST00000549414 CDC25AP30304 524 aa18.3■□□□□ 0.52
CUX1-213ENST00000549414 PDIA6Q15084 440 aa18.3■□□□□ 0.52
CUX1-213ENST00000549414 DESI2Q9BSY9 194 aa18.3■□□□□ 0.52
CUX1-213ENST00000549414 CCDC122Q5T0U0 273 aa18.3■□□□□ 0.52
CUX1-213ENST00000549414 PGBD1Q96JS3 809 aa18.3■□□□□ 0.52
CUX1-213ENST00000549414 KRT86O43790 486 aa18.29■□□□□ 0.52
CUX1-213ENST00000549414 GOLGA8FQ08AF8 430 aa18.29■□□□□ 0.52
CUX1-213ENST00000549414 GOLGA8DPQ0D2H9 430 aa18.29■□□□□ 0.52
CUX1-213ENST00000549414 NEK11Q8NG66 645 aa18.29■□□□□ 0.52
CUX1-213ENST00000549414 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.29■□□□□ 0.52
CUX1-213ENST00000549414 A0A1W2PQ27 194 aa18.29■□□□□ 0.52
CUX1-213ENST00000549414 A0A1W2PQ64 194 aa18.29■□□□□ 0.52
CUX1-213ENST00000549414 A0A1W2PQD8 194 aa18.29■□□□□ 0.52
CUX1-213ENST00000549414 USP17L8P0C7I0 530 aa18.29■□□□□ 0.52
CUX1-213ENST00000549414 EVCP57679 992 aa18.29■□□□□ 0.52
CUX1-213ENST00000549414 ELF2Q15723 593 aa18.29■□□□□ 0.52
CUX1-213ENST00000549414 EHBP1Q8NDI1 1231 aa18.29■□□□□ 0.52
CUX1-213ENST00000549414 NELFBQ8WX92 580 aa18.29■□□□□ 0.52
CUX1-213ENST00000549414 POLR3EQ9NVU0 708 aa18.29■□□□□ 0.52
CUX1-213ENST00000549414 DEPDC5O75140 1603 aa18.29■□□□□ 0.52
CUX1-213ENST00000549414 ADCY7P51828 1080 aa18.29■□□□□ 0.52
CUX1-213ENST00000549414 DCAF17Q5H9S7 520 aaPredicted RBP18.29■□□□□ 0.52
CUX1-213ENST00000549414 STXBP4Q6ZWJ1 553 aa18.29■□□□□ 0.52
CUX1-213ENST00000549414 CSRNP2Q9H175 543 aa18.29■□□□□ 0.52
CUX1-213ENST00000549414 TMEM131LA2VDJ0 1609 aa18.29■□□□□ 0.52
CUX1-213ENST00000549414 RABL6Q3YEC7 729 aaPredicted RBP18.29■□□□□ 0.52
CUX1-213ENST00000549414 CABP7Q86V35 215 aa18.29■□□□□ 0.52
CUX1-213ENST00000549414 DYNLL2Q96FJ2 89 aa18.29■□□□□ 0.52
CUX1-213ENST00000549414 TECPR2O15040 1411 aa18.28■□□□□ 0.52
CUX1-213ENST00000549414 KRT25Q7Z3Z0 450 aa18.28■□□□□ 0.52
CUX1-213ENST00000549414 SMYD4Q8IYR2 804 aaPredicted RBP18.28■□□□□ 0.52
CUX1-213ENST00000549414 SYMPKQ92797 1274 aaKnown RBP18.28■□□□□ 0.52
CUX1-213ENST00000549414 GOPCQ9HD26 462 aa18.28■□□□□ 0.52
CUX1-213ENST00000549414 CEMIPQ8WUJ3 1361 aa18.28■□□□□ 0.52
CUX1-213ENST00000549414 FAM13AO94988 1023 aa18.28■□□□□ 0.52
CUX1-213ENST00000549414 KRT83P78385 493 aa18.28■□□□□ 0.52
CUX1-213ENST00000549414 CYB5R4Q7L1T6 521 aa18.28■□□□□ 0.52
CUX1-213ENST00000549414 TDRD7Q8NHU6 1098 aaKnown RBP18.28■□□□□ 0.52
CUX1-213ENST00000549414 CACTINQ8WUQ7 758 aaKnown RBP18.28■□□□□ 0.52
CUX1-213ENST00000549414 ZFP91Q96JP5 570 aaPredicted RBP18.28■□□□□ 0.52
CUX1-213ENST00000549414 CCDC113Q9H0I3 377 aa18.28■□□□□ 0.52
CUX1-213ENST00000549414 BCCIPQ9P287 314 aaKnown RBP eCLIP18.28■□□□□ 0.52
CUX1-213ENST00000549414 IMPACTQ9P2X3 320 aa18.28■□□□□ 0.52
CUX1-213ENST00000549414 TRPC5Q9UL62 973 aaPredicted RBP18.28■□□□□ 0.52
CUX1-213ENST00000549414 BCS1LQ9Y276 419 aa18.28■□□□□ 0.52
CUX1-213ENST00000549414 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.27■□□□□ 0.52
CUX1-213ENST00000549414 PHACTR2O75167 634 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms