RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 COL9A1P20849 921 aa23.82■■□□□ 1.4
CTDSP2-204ENST00000548823 MCCP23508 829 aa23.82■■□□□ 1.4
CTDSP2-204ENST00000548823 CACNB2Q08289 660 aaPredicted RBP23.82■■□□□ 1.4
CTDSP2-204ENST00000548823 ZNF280CQ8ND82 737 aa23.82■■□□□ 1.4
CTDSP2-204ENST00000548823 SOCS4Q8WXH5 440 aa23.82■■□□□ 1.4
CTDSP2-204ENST00000548823 TLR7Q9NYK1 1049 aaKnown RBP23.82■■□□□ 1.4
CTDSP2-204ENST00000548823 TTC28Q96AY4 2481 aa23.82■■□□□ 1.4
CTDSP2-204ENST00000548823 GAKO14976 1311 aa23.81■■□□□ 1.4
CTDSP2-204ENST00000548823 MAP4K4O95819 1239 aaPredicted RBP23.8■■□□□ 1.4
CTDSP2-204ENST00000548823 ZKSCAN1P17029 563 aaPredicted RBP23.8■■□□□ 1.4
CTDSP2-204ENST00000548823 HMGCS2P54868 508 aa23.8■■□□□ 1.4
CTDSP2-204ENST00000548823 OSBPL5Q9H0X9 879 aaPredicted RBP23.8■■□□□ 1.4
CTDSP2-204ENST00000548823 DDX4Q9NQI0 724 aaKnown RBP23.8■■□□□ 1.4
CTDSP2-204ENST00000548823 GNL3LQ9NVN8 582 aaKnown RBP23.8■■□□□ 1.4
CTDSP2-204ENST00000548823 RAD50Q92878 1312 aa23.8■■□□□ 1.4
CTDSP2-204ENST00000548823 SNRKQ9NRH2 765 aa23.79■■□□□ 1.4
CTDSP2-204ENST00000548823 DIAPH3Q9NSV4 1193 aa23.79■■□□□ 1.4
CTDSP2-204ENST00000548823 CEP126Q9P2H0 1117 aa23.79■■□□□ 1.4
CTDSP2-204ENST00000548823 AKAP2Q9Y2D5 859 aa23.79■■□□□ 1.4
CTDSP2-204ENST00000548823 MAST2Q6P0Q8 1798 aa23.79■■□□□ 1.4
CTDSP2-204ENST00000548823 CCND3P30281 292 aaPredicted RBP23.78■■□□□ 1.4
CTDSP2-204ENST00000548823 SH3D19Q5HYK7 790 aa23.78■■□□□ 1.4
CTDSP2-204ENST00000548823 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.78■■□□□ 1.4
CTDSP2-204ENST00000548823 DENND2AQ9ULE3 1009 aa23.78■■□□□ 1.4
CTDSP2-204ENST00000548823 PICALMQ13492 652 aa23.78■■□□□ 1.4
CTDSP2-204ENST00000548823 MYLIPQ8WY64 445 aa23.78■■□□□ 1.4
CTDSP2-204ENST00000548823 DBNDD2Q9BQY9 259 aa23.78■■□□□ 1.4
CTDSP2-204ENST00000548823 SENP6Q9GZR1 1112 aaPredicted RBP23.78■■□□□ 1.4
CTDSP2-204ENST00000548823 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.78■■□□□ 1.4
CTDSP2-204ENST00000548823 ANO2Q9NQ90 1003 aa23.78■■□□□ 1.4
CTDSP2-204ENST00000548823 PRKAG2Q9UGJ0 569 aa23.78■■□□□ 1.4
CTDSP2-204ENST00000548823 SEMA3EO15041 775 aa23.77■■□□□ 1.4
CTDSP2-204ENST00000548823 ZGPATQ8N5A5 531 aaKnown RBP23.77■■□□□ 1.4
CTDSP2-204ENST00000548823 GPRC5AQ8NFJ5 357 aa23.77■■□□□ 1.4
CTDSP2-204ENST00000548823 USP6NLQ92738 828 aa23.77■■□□□ 1.4
CTDSP2-204ENST00000548823 FAM163AQ96GL9 167 aaPredicted RBP23.77■■□□□ 1.4
CTDSP2-204ENST00000548823 HAUS7Q99871 368 aa23.77■■□□□ 1.4
CTDSP2-204ENST00000548823 BOLA2Q9H3K6 86 aa23.77■■□□□ 1.4
CTDSP2-204ENST00000548823 ANTXR1Q9H6X2 564 aa23.77■■□□□ 1.4
CTDSP2-204ENST00000548823 MAPK4P31152 587 aa23.76■■□□□ 1.39
CTDSP2-204ENST00000548823 IRX3P78415 501 aaPredicted RBP23.76■■□□□ 1.39
CTDSP2-204ENST00000548823 SLF2Q8IX21 1173 aa23.76■■□□□ 1.39
CTDSP2-204ENST00000548823 FRMPD3Q5JV73 1810 aa23.76■■□□□ 1.39
CTDSP2-204ENST00000548823 ATAD5Q96QE3 1844 aa23.76■■□□□ 1.39
CTDSP2-204ENST00000548823 USP17L5A8MUK1 530 aa23.75■■□□□ 1.39
CTDSP2-204ENST00000548823 K7ELQ4 463 aaPredicted RBP23.75■■□□□ 1.39
CTDSP2-204ENST00000548823 RGS2P41220 211 aa23.75■■□□□ 1.39
CTDSP2-204ENST00000548823 SHHQ15465 462 aa23.75■■□□□ 1.39
CTDSP2-204ENST00000548823 LSG1Q9H089 658 aaKnown RBP23.75■■□□□ 1.39
CTDSP2-204ENST00000548823 LTBP2Q14767 1821 aa23.74■■□□□ 1.39
CTDSP2-204ENST00000548823 MUC3AQ02505 3323 aa23.74■■□□□ 1.39
CTDSP2-204ENST00000548823 FAM196BA6NMK8 535 aa23.74■■□□□ 1.39
CTDSP2-204ENST00000548823 NPM3O75607 178 aaKnown RBP23.74■■□□□ 1.39
CTDSP2-204ENST00000548823 FOSL2P15408 326 aa23.74■■□□□ 1.39
CTDSP2-204ENST00000548823 HOXA7P31268 230 aaPredicted RBP23.74■■□□□ 1.39
CTDSP2-204ENST00000548823 HSPA4P34932 840 aa23.74■■□□□ 1.39
CTDSP2-204ENST00000548823 SMAD3P84022 425 aaKnown RBP23.74■■□□□ 1.39
CTDSP2-204ENST00000548823 CCL14Q16627 93 aa23.74■■□□□ 1.39
CTDSP2-204ENST00000548823 KIAA1211Q6ZU35 1233 aa23.74■■□□□ 1.39
CTDSP2-204ENST00000548823 P2RX7Q99572 595 aaKnown RBP23.74■■□□□ 1.39
CTDSP2-204ENST00000548823 TTYH1Q9H313 450 aaPredicted RBP23.74■■□□□ 1.39
CTDSP2-204ENST00000548823 AS3MTQ9HBK9 375 aa23.74■■□□□ 1.39
CTDSP2-204ENST00000548823 TXNRD2Q9NNW7 524 aa23.74■■□□□ 1.39
CTDSP2-204ENST00000548823 A0A1B0GUL7 405 aa23.73■■□□□ 1.39
CTDSP2-204ENST00000548823 TNFRSF10AO00220 468 aa23.73■■□□□ 1.39
CTDSP2-204ENST00000548823 ZBTB22O15209 634 aa23.73■■□□□ 1.39
CTDSP2-204ENST00000548823 ST18O60284 1047 aa23.73■■□□□ 1.39
CTDSP2-204ENST00000548823 CAP2P40123 477 aa23.73■■□□□ 1.39
CTDSP2-204ENST00000548823 BTDP43251 543 aa23.73■■□□□ 1.39
CTDSP2-204ENST00000548823 DZIP1Q86YF9 867 aaKnown RBP23.73■■□□□ 1.39
CTDSP2-204ENST00000548823 IL25Q9H293 177 aa23.73■■□□□ 1.39
CTDSP2-204ENST00000548823 CDH23Q9H251 3354 aa23.73■■□□□ 1.39
CTDSP2-204ENST00000548823 HERVK_113P62684 666 aa23.72■■□□□ 1.39
CTDSP2-204ENST00000548823 ATP2B3Q16720 1220 aa23.72■■□□□ 1.39
CTDSP2-204ENST00000548823 TJAP1Q5JTD0 557 aa23.72■■□□□ 1.39
CTDSP2-204ENST00000548823 MORN1Q5T089 497 aa23.72■■□□□ 1.39
CTDSP2-204ENST00000548823 CWC27Q6UX04 472 aaKnown RBP23.72■■□□□ 1.39
CTDSP2-204ENST00000548823 APBA2Q99767 749 aa23.72■■□□□ 1.39
CTDSP2-204ENST00000548823 FSD1Q9BTV5 496 aa23.72■■□□□ 1.39
CTDSP2-204ENST00000548823 PEX10O60683 326 aa23.71■■□□□ 1.39
CTDSP2-204ENST00000548823 ATN1P54259 1190 aaPredicted RBP23.71■■□□□ 1.39
CTDSP2-204ENST00000548823 C9orf50Q5SZB4 431 aa23.71■■□□□ 1.39
CTDSP2-204ENST00000548823 GPR142Q7Z601 462 aa23.71■■□□□ 1.39
CTDSP2-204ENST00000548823 CCAR1Q8IX12 1150 aaKnown RBP23.71■■□□□ 1.39
CTDSP2-204ENST00000548823 NEUROD6Q96NK8 337 aa23.71■■□□□ 1.39
CTDSP2-204ENST00000548823 PHKA1P46020 1223 aa23.7■■□□□ 1.38
CTDSP2-204ENST00000548823 RTP1P59025 263 aa23.7■■□□□ 1.38
CTDSP2-204ENST00000548823 TIMM10P62072 90 aa23.7■■□□□ 1.38
CTDSP2-204ENST00000548823 WDR18Q9BV38 432 aa23.7■■□□□ 1.38
CTDSP2-204ENST00000548823 RBPJLQ9UBG7 517 aa23.7■■□□□ 1.38
CTDSP2-204ENST00000548823 MCM2P49736 904 aa23.69■■□□□ 1.38
CTDSP2-204ENST00000548823 BACE1P56817 501 aa23.69■■□□□ 1.38
CTDSP2-204ENST00000548823 RHBDL3P58872 404 aa23.69■■□□□ 1.38
CTDSP2-204ENST00000548823 ERVK-9P63128 1117 aa23.69■■□□□ 1.38
CTDSP2-204ENST00000548823 ERVK-24P63145 666 aa23.69■■□□□ 1.38
CTDSP2-204ENST00000548823 Q3C1V9 767 aa23.69■■□□□ 1.38
CTDSP2-204ENST00000548823 PLEKHH3Q7Z736 793 aa23.69■■□□□ 1.38
CTDSP2-204ENST00000548823 KCNB2Q92953 911 aa23.69■■□□□ 1.38
CTDSP2-204ENST00000548823 TMOD4Q9NZQ9 345 aa23.69■■□□□ 1.38
CTDSP2-204ENST00000548823 MROH7-TTC4A0A0A0MT08 1334 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms