RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 CCDC85AQ96PX6 553 aaPredicted RBP26.17■■□□□ 1.78
NPAS3-206ENST00000548645 CNNM2Q9H8M5 875 aa26.17■■□□□ 1.78
NPAS3-206ENST00000548645 LRRIQ3A6PVS8 624 aaPredicted RBP26.17■■□□□ 1.78
NPAS3-206ENST00000548645 ARHGAP25P42331 645 aa26.17■■□□□ 1.78
NPAS3-206ENST00000548645 METTL24Q5JXM2 366 aa26.17■■□□□ 1.78
NPAS3-206ENST00000548645 CTCFLQ8NI51 663 aaPredicted RBP26.17■■□□□ 1.78
NPAS3-206ENST00000548645 ISCA1Q9BUE6 129 aa26.17■■□□□ 1.78
NPAS3-206ENST00000548645 FAM204AQ9H8W3 233 aa26.17■■□□□ 1.78
NPAS3-206ENST00000548645 TRPM3Q9HCF6 1732 aaPredicted RBP26.16■■□□□ 1.78
NPAS3-206ENST00000548645 ERVK-24P63145 666 aa26.16■■□□□ 1.78
NPAS3-206ENST00000548645 LRRC31Q6UY01 552 aa26.16■■□□□ 1.78
NPAS3-206ENST00000548645 AIDAQ96BJ3 306 aa26.16■■□□□ 1.78
NPAS3-206ENST00000548645 PAGE5Q96GU1 130 aa26.16■■□□□ 1.78
NPAS3-206ENST00000548645 ABHD10Q9NUJ1 306 aa26.16■■□□□ 1.78
NPAS3-206ENST00000548645 EIF3CLB5ME19 914 aaKnown RBP26.16■■□□□ 1.78
NPAS3-206ENST00000548645 AMPD2Q01433 879 aa26.16■■□□□ 1.78
NPAS3-206ENST00000548645 SH3RF1Q7Z6J0 888 aa26.16■■□□□ 1.78
NPAS3-206ENST00000548645 EIF3CQ99613 913 aaKnown RBP26.16■■□□□ 1.78
NPAS3-206ENST00000548645 PIH1D3Q9NQM4 214 aaKnown RBP26.16■■□□□ 1.78
NPAS3-206ENST00000548645 INCENPQ9NQS7 918 aa26.16■■□□□ 1.78
NPAS3-206ENST00000548645 MST1RQ04912 1400 aa26.15■■□□□ 1.78
NPAS3-206ENST00000548645 MCM3P25205 808 aa26.15■■□□□ 1.78
NPAS3-206ENST00000548645 STRBPQ96SI9 672 aaKnown RBP26.15■■□□□ 1.78
NPAS3-206ENST00000548645 CABP5Q9NP86 173 aa26.15■■□□□ 1.78
NPAS3-206ENST00000548645 PPP1R3GB7ZBB8 358 aa26.15■■□□□ 1.78
NPAS3-206ENST00000548645 PDE6AP16499 860 aa26.15■■□□□ 1.78
NPAS3-206ENST00000548645 TRIM14Q14142 442 aa26.15■■□□□ 1.78
NPAS3-206ENST00000548645 KRT23Q9C075 422 aa26.15■■□□□ 1.78
NPAS3-206ENST00000548645 CCDC196A0A1B0GTZ2 297 aa26.15■■□□□ 1.78
NPAS3-206ENST00000548645 ABL1P00519 1130 aa26.15■■□□□ 1.78
NPAS3-206ENST00000548645 TTC31Q49AM3 519 aaPredicted RBP26.15■■□□□ 1.78
NPAS3-206ENST00000548645 N4BP3O15049 544 aa26.14■■□□□ 1.78
NPAS3-206ENST00000548645 AARSP49588 968 aaKnown RBP eCLIP26.14■■□□□ 1.78
NPAS3-206ENST00000548645 MAP9Q49MG5 647 aa26.14■■□□□ 1.78
NPAS3-206ENST00000548645 CRACR2BQ8N4Y2 399 aaPredicted RBP26.14■■□□□ 1.78
NPAS3-206ENST00000548645 NAPBQ9H115 298 aa26.14■■□□□ 1.78
NPAS3-206ENST00000548645 DPYDQ12882 1025 aa26.14■■□□□ 1.77
NPAS3-206ENST00000548645 SART3Q15020 963 aaKnown RBP26.14■■□□□ 1.77
NPAS3-206ENST00000548645 NUP88Q99567 741 aaPredicted RBP26.14■■□□□ 1.77
NPAS3-206ENST00000548645 TRIM75PA6NK02 468 aa26.13■■□□□ 1.77
NPAS3-206ENST00000548645 TCIRG1Q13488 830 aa26.13■■□□□ 1.77
NPAS3-206ENST00000548645 PLA2G12BQ9BX93 195 aa26.13■■□□□ 1.77
NPAS3-206ENST00000548645 LIMA1Q9UHB6 759 aaKnown RBP26.13■■□□□ 1.77
NPAS3-206ENST00000548645 AKAP11Q9UKA4 1901 aa26.13■■□□□ 1.77
NPAS3-206ENST00000548645 A0A087X0B3 334 aa26.13■■□□□ 1.77
NPAS3-206ENST00000548645 PATL2C9JE40 543 aaKnown RBP26.13■■□□□ 1.77
NPAS3-206ENST00000548645 RNF40O75150 1001 aa26.13■■□□□ 1.77
NPAS3-206ENST00000548645 CSF1RP07333 972 aa26.13■■□□□ 1.77
NPAS3-206ENST00000548645 CCT6AP40227 531 aaKnown RBP26.13■■□□□ 1.77
NPAS3-206ENST00000548645 CTDSPL2Q05D32 466 aa26.13■■□□□ 1.77
NPAS3-206ENST00000548645 NCAPH2Q6IBW4 605 aa26.13■■□□□ 1.77
NPAS3-206ENST00000548645 OXER1Q8TDS5 423 aa26.13■■□□□ 1.77
NPAS3-206ENST00000548645 AFAP1L1Q8TED9 768 aa26.13■■□□□ 1.77
NPAS3-206ENST00000548645 EPSTI1Q96J88 318 aa26.13■■□□□ 1.77
NPAS3-206ENST00000548645 RIC1Q4ADV7 1423 aa26.13■■□□□ 1.77
NPAS3-206ENST00000548645 CORO7P57737 925 aa26.12■■□□□ 1.77
NPAS3-206ENST00000548645 SPAG1Q07617 926 aa26.12■■□□□ 1.77
NPAS3-206ENST00000548645 CCDC82Q8N4S0 544 aa26.12■■□□□ 1.77
NPAS3-206ENST00000548645 PPM1EQ8WY54 764 aa26.12■■□□□ 1.77
NPAS3-206ENST00000548645 SLF1Q9BQI6 1058 aa26.12■■□□□ 1.77
NPAS3-206ENST00000548645 RIPOR2Q9Y4F9 1068 aa26.12■■□□□ 1.77
NPAS3-206ENST00000548645 LRRC10BA6NIK2 292 aa26.12■■□□□ 1.77
NPAS3-206ENST00000548645 PPFIA4O75335 1185 aa26.12■■□□□ 1.77
NPAS3-206ENST00000548645 KRT31Q15323 416 aa26.12■■□□□ 1.77
NPAS3-206ENST00000548645 AKNAD1Q5T1N1 836 aa26.12■■□□□ 1.77
NPAS3-206ENST00000548645 SMYD4Q8IYR2 804 aaPredicted RBP26.12■■□□□ 1.77
NPAS3-206ENST00000548645 IFNL3Q8IZI9 196 aa26.12■■□□□ 1.77
NPAS3-206ENST00000548645 ANKRD20A12PQ8NF67 263 aa26.12■■□□□ 1.77
NPAS3-206ENST00000548645 LRP6O75581 1613 aa26.12■■□□□ 1.77
NPAS3-206ENST00000548645 PCCAP05165 728 aaPredicted RBP26.11■■□□□ 1.77
NPAS3-206ENST00000548645 WTAPQ15007 396 aa26.11■■□□□ 1.77
NPAS3-206ENST00000548645 MFSD6Q6ZSS7 791 aa26.11■■□□□ 1.77
NPAS3-206ENST00000548645 MYO5AQ9Y4I1 1855 aaKnown RBP26.11■■□□□ 1.77
NPAS3-206ENST00000548645 PKD1L3Q7Z443 1732 aa26.11■■□□□ 1.77
NPAS3-206ENST00000548645 CASP1P29466 404 aa26.11■■□□□ 1.77
NPAS3-206ENST00000548645 USP14P54578 494 aa26.11■■□□□ 1.77
NPAS3-206ENST00000548645 AKAP17AQ02040 695 aaKnown RBP26.11■■□□□ 1.77
NPAS3-206ENST00000548645 LDHAL6AQ6ZMR3 332 aa26.11■■□□□ 1.77
NPAS3-206ENST00000548645 CTNND2Q9UQB3 1225 aa26.11■■□□□ 1.77
NPAS3-206ENST00000548645 PARP4Q9UKK3 1724 aaKnown RBP26.11■■□□□ 1.77
NPAS3-206ENST00000548645 TCRBV5S4A2TA0A5A2 114 aa26.11■■□□□ 1.77
NPAS3-206ENST00000548645 ICE2Q659A1 982 aa26.11■■□□□ 1.77
NPAS3-206ENST00000548645 ERICH2A1L162 156 aa26.1■■□□□ 1.77
NPAS3-206ENST00000548645 KRT9P35527 623 aa26.1■■□□□ 1.77
NPAS3-206ENST00000548645 TRIM28Q13263 835 aaKnown RBP26.1■■□□□ 1.77
NPAS3-206ENST00000548645 TRAPPC11Q7Z392 1133 aa26.1■■□□□ 1.77
NPAS3-206ENST00000548645 TMTC2Q8N394 836 aa26.1■■□□□ 1.77
NPAS3-206ENST00000548645 SYMPKQ92797 1274 aaKnown RBP26.1■■□□□ 1.77
NPAS3-206ENST00000548645 FERMT2Q96AC1 680 aa26.1■■□□□ 1.77
NPAS3-206ENST00000548645 FAM89AQ96GI7 184 aa26.1■■□□□ 1.77
NPAS3-206ENST00000548645 EPB41L4AQ9HCS5 686 aaPredicted RBP26.09■■□□□ 1.77
NPAS3-206ENST00000548645 MYH8P13535 1937 aa26.09■■□□□ 1.77
NPAS3-206ENST00000548645 SYF2O95926 243 aaKnown RBP26.09■■□□□ 1.77
NPAS3-206ENST00000548645 BMP15O95972 392 aa26.09■■□□□ 1.77
NPAS3-206ENST00000548645 COPB1P53618 953 aaKnown RBP26.09■■□□□ 1.77
NPAS3-206ENST00000548645 VPS16Q9H269 839 aa26.09■■□□□ 1.77
NPAS3-206ENST00000548645 EPN1Q9Y6I3 576 aaPredicted RBP26.09■■□□□ 1.77
NPAS3-206ENST00000548645 RCAN1P53805 252 aa26.08■■□□□ 1.77
NPAS3-206ENST00000548645 GUCA1BQ9UMX6 200 aa26.08■■□□□ 1.77
NPAS3-206ENST00000548645 PSMD14O00487 310 aa26.08■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms