RNA–Protein interactions for RNA: ENST00000548390.5

LETMD1-215, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 549 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-215ENST00000548390 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.36■□□□□ 0.85
LETMD1-215ENST00000548390 KAT14Q9H8E8 782 aa20.36■□□□□ 0.85
LETMD1-215ENST00000548390 MTMR4Q9NYA4 1195 aa20.36■□□□□ 0.85
LETMD1-215ENST00000548390 BRPF3Q9ULD4 1205 aa20.36■□□□□ 0.85
LETMD1-215ENST00000548390 NID2Q14112 1375 aa20.35■□□□□ 0.85
LETMD1-215ENST00000548390 CCDC196A0A1B0GTZ2 297 aa20.35■□□□□ 0.85
LETMD1-215ENST00000548390 TOP1P11387 765 aaKnown RBP20.35■□□□□ 0.85
LETMD1-215ENST00000548390 RCSD1Q6JBY9 416 aa20.35■□□□□ 0.85
LETMD1-215ENST00000548390 MIGA2Q7L4E1 593 aa20.35■□□□□ 0.85
LETMD1-215ENST00000548390 CEP95Q96GE4 821 aa20.35■□□□□ 0.85
LETMD1-215ENST00000548390 MAP3K14Q99558 947 aa20.35■□□□□ 0.85
LETMD1-215ENST00000548390 RRAGCQ9HB90 399 aa20.35■□□□□ 0.85
LETMD1-215ENST00000548390 NAP1L2Q9ULW6 460 aaPredicted RBP20.35■□□□□ 0.85
LETMD1-215ENST00000548390 SYNPO2Q9UMS6 1093 aa20.35■□□□□ 0.85
LETMD1-215ENST00000548390 STX8Q9UNK0 236 aa20.35■□□□□ 0.85
LETMD1-215ENST00000548390 NMT2O60551 498 aa20.34■□□□□ 0.85
LETMD1-215ENST00000548390 ASNSP08243 561 aa20.34■□□□□ 0.85
LETMD1-215ENST00000548390 NF2P35240 595 aa20.34■□□□□ 0.85
LETMD1-215ENST00000548390 CAP2P40123 477 aa20.34■□□□□ 0.85
LETMD1-215ENST00000548390 LDHDQ86WU2 507 aa20.34■□□□□ 0.85
LETMD1-215ENST00000548390 ZNF654Q8IZM8 581 aa20.34■□□□□ 0.85
LETMD1-215ENST00000548390 LLPHQ9BRT6 129 aaKnown RBP20.34■□□□□ 0.85
LETMD1-215ENST00000548390 NYAP2Q9P242 653 aa20.34■□□□□ 0.85
LETMD1-215ENST00000548390 SCAF8Q9UPN6 1271 aaKnown RBP20.34■□□□□ 0.85
LETMD1-215ENST00000548390 PHF20L1A8MW92 1017 aa20.33■□□□□ 0.85
LETMD1-215ENST00000548390 CTNND1O60716 968 aaKnown RBP20.33■□□□□ 0.85
LETMD1-215ENST00000548390 LARGE1O95461 756 aa20.33■□□□□ 0.85
LETMD1-215ENST00000548390 METAP2P50579 478 aaKnown RBP eCLIP20.33■□□□□ 0.85
LETMD1-215ENST00000548390 CPLX2Q6PUV4 134 aaKnown RBP20.33■□□□□ 0.85
LETMD1-215ENST00000548390 SENP2Q9HC62 589 aa20.33■□□□□ 0.85
LETMD1-215ENST00000548390 CWC22Q9HCG8 908 aaKnown RBP20.33■□□□□ 0.85
LETMD1-215ENST00000548390 ZNF112Q9UJU3 913 aa20.33■□□□□ 0.85
LETMD1-215ENST00000548390 ZBTB21Q9ULJ3 1066 aa20.33■□□□□ 0.85
LETMD1-215ENST00000548390 CLEC11AQ9Y240 323 aa20.33■□□□□ 0.85
LETMD1-215ENST00000548390 GOLGA8AA7E2F4 631 aa20.32■□□□□ 0.84
LETMD1-215ENST00000548390 ADM5C9JUS6 153 aa20.32■□□□□ 0.84
LETMD1-215ENST00000548390 PPP1R12BO60237 982 aaPredicted RBP20.32■□□□□ 0.84
LETMD1-215ENST00000548390 GDF11O95390 407 aa20.32■□□□□ 0.84
LETMD1-215ENST00000548390 GH2P01242 217 aa20.32■□□□□ 0.84
LETMD1-215ENST00000548390 SLC4A3P48751 1232 aa20.32■□□□□ 0.84
LETMD1-215ENST00000548390 ICA1Q05084 483 aa20.32■□□□□ 0.84
LETMD1-215ENST00000548390 SCRN1Q12765 414 aa20.32■□□□□ 0.84
LETMD1-215ENST00000548390 STK3Q13188 491 aa20.32■□□□□ 0.84
LETMD1-215ENST00000548390 USP48Q86UV5 1035 aa20.32■□□□□ 0.84
LETMD1-215ENST00000548390 MICU3Q86XE3 530 aa20.32■□□□□ 0.84
LETMD1-215ENST00000548390 CCDC83Q8IWF9 413 aa20.32■□□□□ 0.84
LETMD1-215ENST00000548390 PNMA1Q8ND90 353 aa20.32■□□□□ 0.84
LETMD1-215ENST00000548390 MKL1Q969V6 931 aa20.32■□□□□ 0.84
LETMD1-215ENST00000548390 TMEM47Q9BQJ4 181 aa20.32■□□□□ 0.84
LETMD1-215ENST00000548390 RBM28Q9NW13 759 aaKnown RBP20.32■□□□□ 0.84
LETMD1-215ENST00000548390 HPS5Q9UPZ3 1129 aa20.32■□□□□ 0.84
LETMD1-215ENST00000548390 CDKL5O76039 1030 aa20.31■□□□□ 0.84
LETMD1-215ENST00000548390 SLURP2P0DP57 97 aa20.31■□□□□ 0.84
LETMD1-215ENST00000548390 KIF5BP33176 963 aa20.31■□□□□ 0.84
LETMD1-215ENST00000548390 TROAPQ12815 778 aa20.31■□□□□ 0.84
LETMD1-215ENST00000548390 MAPK8IP2Q13387 824 aaPredicted RBP20.31■□□□□ 0.84
LETMD1-215ENST00000548390 NECAB1Q8N987 351 aa20.31■□□□□ 0.84
LETMD1-215ENST00000548390 CPLX1O14810 134 aa20.3■□□□□ 0.84
LETMD1-215ENST00000548390 RRP1BQ14684 758 aaKnown RBP20.3■□□□□ 0.84
LETMD1-215ENST00000548390 SEPT2Q15019 361 aa20.3■□□□□ 0.84
LETMD1-215ENST00000548390 RAB3GAP1Q15042 981 aa20.3■□□□□ 0.84
LETMD1-215ENST00000548390 RTN1Q16799 776 aa20.3■□□□□ 0.84
LETMD1-215ENST00000548390 FANCBQ8NB91 859 aa20.3■□□□□ 0.84
LETMD1-215ENST00000548390 CTCFLQ8NI51 663 aaPredicted RBP20.3■□□□□ 0.84
LETMD1-215ENST00000548390 CDCA5Q96FF9 252 aa20.3■□□□□ 0.84
LETMD1-215ENST00000548390 SH2D4AQ9H788 454 aa20.3■□□□□ 0.84
LETMD1-215ENST00000548390 ARHGEF10LQ9HCE6 1279 aa20.3■□□□□ 0.84
LETMD1-215ENST00000548390 CLIP2Q9UDT6 1046 aa20.3■□□□□ 0.84
LETMD1-215ENST00000548390 GUCY1A2P33402 732 aa20.29■□□□□ 0.84
LETMD1-215ENST00000548390 GNAQP50148 359 aa20.29■□□□□ 0.84
LETMD1-215ENST00000548390 HMGN5P82970 282 aaKnown RBP20.29■□□□□ 0.84
LETMD1-215ENST00000548390 ST3GAL1Q11201 340 aa20.29■□□□□ 0.84
LETMD1-215ENST00000548390 PRAMEF18Q5VWM3 479 aa20.29■□□□□ 0.84
LETMD1-215ENST00000548390 NUP133Q8WUM0 1156 aa20.29■□□□□ 0.84
LETMD1-215ENST00000548390 KLRG1Q96E93 195 aa20.29■□□□□ 0.84
LETMD1-215ENST00000548390 SMC3Q9UQE7 1217 aa20.29■□□□□ 0.84
LETMD1-215ENST00000548390 KIF3AQ9Y496 699 aa20.29■□□□□ 0.84
LETMD1-215ENST00000548390 MYH8P13535 1937 aa20.29■□□□□ 0.84
LETMD1-215ENST00000548390 GREB1LQ9C091 1923 aaPredicted RBP20.29■□□□□ 0.84
LETMD1-215ENST00000548390 EEF2P13639 858 aaKnown RBP20.28■□□□□ 0.84
LETMD1-215ENST00000548390 PDIA4P13667 645 aaKnown RBP20.28■□□□□ 0.84
LETMD1-215ENST00000548390 IREB2P48200 963 aaKnown RBP20.28■□□□□ 0.84
LETMD1-215ENST00000548390 CCT2P78371 535 aaKnown RBP20.28■□□□□ 0.84
LETMD1-215ENST00000548390 NOL9Q5SY16 702 aaKnown RBP20.28■□□□□ 0.84
LETMD1-215ENST00000548390 SCYL3Q8IZE3 742 aa20.28■□□□□ 0.84
LETMD1-215ENST00000548390 WRNIP1Q96S55 665 aa20.28■□□□□ 0.84
LETMD1-215ENST00000548390 GLIS2Q9BZE0 524 aaPredicted RBP20.28■□□□□ 0.84
LETMD1-215ENST00000548390 NMRK2Q9NPI5 230 aa20.28■□□□□ 0.84
LETMD1-215ENST00000548390 SSC5DA1L4H1 1573 aa20.28■□□□□ 0.84
LETMD1-215ENST00000548390 ATP2B2Q01814 1243 aa20.27■□□□□ 0.84
LETMD1-215ENST00000548390 GRM4Q14833 912 aa20.27■□□□□ 0.84
LETMD1-215ENST00000548390 LZTS2Q9BRK4 669 aa20.27■□□□□ 0.84
LETMD1-215ENST00000548390 MYL10Q9BUA6 226 aa20.27■□□□□ 0.84
LETMD1-215ENST00000548390 PICK1Q9NRD5 415 aa20.27■□□□□ 0.84
LETMD1-215ENST00000548390 UNCXA6NJT0 531 aa20.26■□□□□ 0.83
LETMD1-215ENST00000548390 USP2O75604 605 aaPredicted RBP20.26■□□□□ 0.83
LETMD1-215ENST00000548390 JAG1P78504 1218 aa20.26■□□□□ 0.83
LETMD1-215ENST00000548390 MAP3K9P80192 1104 aa20.26■□□□□ 0.83
LETMD1-215ENST00000548390 MAP3K11Q16584 847 aa20.26■□□□□ 0.83
LETMD1-215ENST00000548390 GMCL1P1Q8NEA9 526 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms