RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 AOC2O75106 756 aa27.37■■□□□ 1.97
SMARCD1-203ENST00000547247 MCCP23508 829 aa27.37■■□□□ 1.97
SMARCD1-203ENST00000547247 NOGQ13253 232 aa27.37■■□□□ 1.97
SMARCD1-203ENST00000547247 STOX1Q6ZVD7 989 aa27.37■■□□□ 1.97
SMARCD1-203ENST00000547247 RALYLQ86SE5 291 aaKnown RBP27.37■■□□□ 1.97
SMARCD1-203ENST00000547247 NCOA7Q8NI08 942 aa27.37■■□□□ 1.97
SMARCD1-203ENST00000547247 KDM4AO75164 1064 aa27.36■■□□□ 1.97
SMARCD1-203ENST00000547247 ICA1Q05084 483 aa27.36■■□□□ 1.97
SMARCD1-203ENST00000547247 SPP2Q13103 211 aa27.36■■□□□ 1.97
SMARCD1-203ENST00000547247 TSGA10IPQ3SY00 556 aa27.36■■□□□ 1.97
SMARCD1-203ENST00000547247 RASEFQ8IZ41 740 aa27.36■■□□□ 1.97
SMARCD1-203ENST00000547247 KCNB2Q92953 911 aa27.36■■□□□ 1.97
SMARCD1-203ENST00000547247 KCNH4Q9UQ05 1017 aa27.36■■□□□ 1.97
SMARCD1-203ENST00000547247 TRIM75PA6NK02 468 aa27.35■■□□□ 1.97
SMARCD1-203ENST00000547247 CXCL11O14625 94 aa27.35■■□□□ 1.97
SMARCD1-203ENST00000547247 ZSWIM5Q9P217 1185 aa27.35■■□□□ 1.97
SMARCD1-203ENST00000547247 GREB1LQ9C091 1923 aaPredicted RBP27.35■■□□□ 1.97
SMARCD1-203ENST00000547247 PHIPQ8WWQ0 1821 aa27.35■■□□□ 1.97
SMARCD1-203ENST00000547247 IGKV6D-41A0A0C4DH26 115 aa27.35■■□□□ 1.97
SMARCD1-203ENST00000547247 KRT32Q14532 448 aa27.35■■□□□ 1.97
SMARCD1-203ENST00000547247 CLEC10AQ8IUN9 316 aa27.35■■□□□ 1.97
SMARCD1-203ENST00000547247 NKX2-3Q8TAU0 364 aa27.35■■□□□ 1.97
SMARCD1-203ENST00000547247 GTF2A2P52657 109 aa27.34■■□□□ 1.97
SMARCD1-203ENST00000547247 SNAPC2Q13487 334 aa27.34■■□□□ 1.97
SMARCD1-203ENST00000547247 CEP95Q96GE4 821 aa27.34■■□□□ 1.97
SMARCD1-203ENST00000547247 TCP11L1Q9NUJ3 509 aa27.34■■□□□ 1.97
SMARCD1-203ENST00000547247 MTMR4Q9NYA4 1195 aa27.34■■□□□ 1.97
SMARCD1-203ENST00000547247 USP17L10C9JJH3 530 aa27.33■■□□□ 1.97
SMARCD1-203ENST00000547247 PPP4R3BQ5MIZ7 849 aa27.33■■□□□ 1.97
SMARCD1-203ENST00000547247 IQCA1Q86XH1 822 aa27.33■■□□□ 1.97
SMARCD1-203ENST00000547247 ARHGEF10LQ9HCE6 1279 aa27.33■■□□□ 1.97
SMARCD1-203ENST00000547247 IL17RBQ9NRM6 502 aa27.33■■□□□ 1.97
SMARCD1-203ENST00000547247 NYAP2Q9P242 653 aa27.33■■□□□ 1.97
SMARCD1-203ENST00000547247 SNX14Q9Y5W7 946 aa27.33■■□□□ 1.97
SMARCD1-203ENST00000547247 MANSC4A6NHS7 340 aaPredicted RBP27.32■■□□□ 1.96
SMARCD1-203ENST00000547247 EEF2P13639 858 aaKnown RBP27.32■■□□□ 1.96
SMARCD1-203ENST00000547247 ATP2B2Q01814 1243 aa27.32■■□□□ 1.96
SMARCD1-203ENST00000547247 SIAH1Q8IUQ4 282 aa27.32■■□□□ 1.96
SMARCD1-203ENST00000547247 ACER1Q8TDN7 264 aa27.32■■□□□ 1.96
SMARCD1-203ENST00000547247 MS4A4AQ96JQ5 239 aa27.32■■□□□ 1.96
SMARCD1-203ENST00000547247 NMT2O60551 498 aa27.31■■□□□ 1.96
SMARCD1-203ENST00000547247 MAP2K2P36507 400 aa27.31■■□□□ 1.96
SMARCD1-203ENST00000547247 BACE1P56817 501 aa27.31■■□□□ 1.96
SMARCD1-203ENST00000547247 KIF23Q02241 960 aaPredicted RBP27.31■■□□□ 1.96
SMARCD1-203ENST00000547247 ZIC5Q96T25 663 aa27.31■■□□□ 1.96
SMARCD1-203ENST00000547247 FEZ1Q99689 392 aa27.31■■□□□ 1.96
SMARCD1-203ENST00000547247 SH2D4AQ9H788 454 aa27.31■■□□□ 1.96
SMARCD1-203ENST00000547247 C19orf81C9J6K1 198 aa27.31■■□□□ 1.96
SMARCD1-203ENST00000547247 TTLL1O95922 423 aa27.31■■□□□ 1.96
SMARCD1-203ENST00000547247 CETPP11597 493 aa27.31■■□□□ 1.96
SMARCD1-203ENST00000547247 MTMR2Q13614 643 aa27.31■■□□□ 1.96
SMARCD1-203ENST00000547247 CCDC178Q5BJE1 867 aa27.31■■□□□ 1.96
SMARCD1-203ENST00000547247 MB21D2Q8IYB1 491 aaPredicted RBP27.31■■□□□ 1.96
SMARCD1-203ENST00000547247 NEK1Q96PY6 1258 aa27.31■■□□□ 1.96
SMARCD1-203ENST00000547247 CLIP2Q9UDT6 1046 aa27.31■■□□□ 1.96
SMARCD1-203ENST00000547247 A0A0G2JLL6 359 aaPredicted RBP27.3■■□□□ 1.96
SMARCD1-203ENST00000547247 A0A1W2PRG0 241 aa27.3■■□□□ 1.96
SMARCD1-203ENST00000547247 INHBEP58166 350 aa27.3■■□□□ 1.96
SMARCD1-203ENST00000547247 CYB5R4Q7L1T6 521 aa27.3■■□□□ 1.96
SMARCD1-203ENST00000547247 PRRT2Q7Z6L0 340 aaPredicted RBP27.3■■□□□ 1.96
SMARCD1-203ENST00000547247 ZKSCAN3Q9BRR0 538 aa27.3■■□□□ 1.96
SMARCD1-203ENST00000547247 KIAA1683Q9H0B3 1180 aa27.3■■□□□ 1.96
SMARCD1-203ENST00000547247 STX8Q9UNK0 236 aa27.3■■□□□ 1.96
SMARCD1-203ENST00000547247 TMX2Q9Y320 296 aa27.3■■□□□ 1.96
SMARCD1-203ENST00000547247 USP14P54578 494 aa27.29■■□□□ 1.96
SMARCD1-203ENST00000547247 ADCK5Q3MIX3 580 aa27.29■■□□□ 1.96
SMARCD1-203ENST00000547247 SH3D19Q5HYK7 790 aa27.29■■□□□ 1.96
SMARCD1-203ENST00000547247 UBAC1Q9BSL1 405 aa27.29■■□□□ 1.96
SMARCD1-203ENST00000547247 CCL15-CCL14A0A0B4J2E2 113 aa27.28■■□□□ 1.96
SMARCD1-203ENST00000547247 HMGCS2P54868 508 aa27.28■■□□□ 1.96
SMARCD1-203ENST00000547247 SREBF2Q12772 1141 aa27.28■■□□□ 1.96
SMARCD1-203ENST00000547247 CCL15Q16663 113 aa27.28■■□□□ 1.96
SMARCD1-203ENST00000547247 REM2Q8IYK8 340 aaPredicted RBP27.28■■□□□ 1.96
SMARCD1-203ENST00000547247 TTC14Q96N46 770 aa27.28■■□□□ 1.96
SMARCD1-203ENST00000547247 ZSCAN10Q96SZ4 725 aaPredicted RBP27.28■■□□□ 1.96
SMARCD1-203ENST00000547247 BACH2Q9BYV9 841 aa27.28■■□□□ 1.96
SMARCD1-203ENST00000547247 TESPA1A2RU30 521 aaPredicted RBP27.27■■□□□ 1.96
SMARCD1-203ENST00000547247 MCM5P33992 734 aa27.27■■□□□ 1.96
SMARCD1-203ENST00000547247 NOVP48745 357 aa27.27■■□□□ 1.96
SMARCD1-203ENST00000547247 ZYXQ15942 572 aaKnown RBP27.27■■□□□ 1.96
SMARCD1-203ENST00000547247 FASTKD5Q7L8L6 764 aaKnown RBP27.27■■□□□ 1.96
SMARCD1-203ENST00000547247 MKL1Q969V6 931 aa27.27■■□□□ 1.96
SMARCD1-203ENST00000547247 UPF2Q9HAU5 1272 aaKnown RBP27.27■■□□□ 1.96
SMARCD1-203ENST00000547247 TMOD4Q9NZQ9 345 aa27.27■■□□□ 1.96
SMARCD1-203ENST00000547247 USP17L2Q6R6M4 530 aa27.26■■□□□ 1.96
SMARCD1-203ENST00000547247 BRI3BPQ8WY22 251 aa27.26■■□□□ 1.96
SMARCD1-203ENST00000547247 JAKMIP1Q96N16 626 aaKnown RBP27.26■■□□□ 1.96
SMARCD1-203ENST00000547247 PTPRFP10586 1907 aa27.26■■□□□ 1.95
SMARCD1-203ENST00000547247 HMGB1P09429 215 aaKnown RBP27.26■■□□□ 1.95
SMARCD1-203ENST00000547247 PSMA5P28066 241 aa27.26■■□□□ 1.95
SMARCD1-203ENST00000547247 ANAPC15P60006 121 aa27.26■■□□□ 1.95
SMARCD1-203ENST00000547247 MAP2K1Q02750 393 aaPredicted RBP27.26■■□□□ 1.95
SMARCD1-203ENST00000547247 SART3Q15020 963 aaKnown RBP27.26■■□□□ 1.95
SMARCD1-203ENST00000547247 GADL1Q6ZQY3 521 aa27.26■■□□□ 1.95
SMARCD1-203ENST00000547247 CHST3Q7LGC8 479 aa27.26■■□□□ 1.95
SMARCD1-203ENST00000547247 DGKHQ86XP1 1220 aa27.26■■□□□ 1.95
SMARCD1-203ENST00000547247 PROCA1Q8NCQ7 364 aaPredicted RBP27.26■■□□□ 1.95
SMARCD1-203ENST00000547247 SYNPO2Q9UMS6 1093 aa27.26■■□□□ 1.95
SMARCD1-203ENST00000547247 TNKSO95271 1327 aa27.26■■□□□ 1.95
SMARCD1-203ENST00000547247 ERICH2A1L162 156 aa27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms