RNA–Protein interactions for RNA: ENST00000546911.5

LINC02396-201, Transcript of long intergenic non-protein coding RNA 2396, humanhuman

TSL 3

Gene LINC02396, Length 300 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02396-201ENST00000546911 CCDC17Q96LX7 622 aa11.75□□□□□ -0.53
LINC02396-201ENST00000546911 TMEM106CQ9BVX2 250 aa11.75□□□□□ -0.53
LINC02396-201ENST00000546911 RWDD1Q9H446 243 aaPredicted RBP11.75□□□□□ -0.53
LINC02396-201ENST00000546911 RBPJLQ9UBG7 517 aa11.75□□□□□ -0.53
LINC02396-201ENST00000546911 MORF4L1Q9UBU8 362 aa11.75□□□□□ -0.53
LINC02396-201ENST00000546911 SUPT16HQ9Y5B9 1047 aaKnown RBP11.75□□□□□ -0.53
LINC02396-201ENST00000546911 PTPRFP10586 1907 aa11.75□□□□□ -0.53
LINC02396-201ENST00000546911 MYPNQ86TC9 1320 aa11.75□□□□□ -0.53
LINC02396-201ENST00000546911 TNRC18O15417 2968 aaPredicted RBP11.74□□□□□ -0.53
LINC02396-201ENST00000546911 A0A1W2PRG0 241 aa11.74□□□□□ -0.53
LINC02396-201ENST00000546911 USP17L15C9J2P7 530 aa11.74□□□□□ -0.53
LINC02396-201ENST00000546911 USP17L13C9JLJ4 530 aa11.74□□□□□ -0.53
LINC02396-201ENST00000546911 USP17L11C9JVI0 530 aa11.74□□□□□ -0.53
LINC02396-201ENST00000546911 USP17L18D6R9N7 530 aa11.74□□□□□ -0.53
LINC02396-201ENST00000546911 USP17L22D6RA61 530 aa11.74□□□□□ -0.53
LINC02396-201ENST00000546911 USP17L17D6RBQ6 530 aa11.74□□□□□ -0.53
LINC02396-201ENST00000546911 USP17L19D6RCP7 530 aa11.74□□□□□ -0.53
LINC02396-201ENST00000546911 USP17L20D6RJB6 530 aa11.74□□□□□ -0.53
LINC02396-201ENST00000546911 MPHOSPH10O00566 681 aaKnown RBP11.74□□□□□ -0.53
LINC02396-201ENST00000546911 TNPO2O14787 897 aaKnown RBP11.74□□□□□ -0.53
LINC02396-201ENST00000546911 IGHDP01880 384 aa11.74□□□□□ -0.53
LINC02396-201ENST00000546911 EN2P19622 333 aaPredicted RBP11.74□□□□□ -0.53
LINC02396-201ENST00000546911 GRK4P32298 578 aa11.74□□□□□ -0.53
LINC02396-201ENST00000546911 FLT3LGP49771 235 aa11.74□□□□□ -0.53
LINC02396-201ENST00000546911 HERVK_113P62684 666 aa11.74□□□□□ -0.53
LINC02396-201ENST00000546911 USP17L24Q0WX57 530 aa11.74□□□□□ -0.53
LINC02396-201ENST00000546911 ZYXQ15942 572 aaKnown RBP11.74□□□□□ -0.53
LINC02396-201ENST00000546911 Q3C1V9 767 aa11.74□□□□□ -0.53
LINC02396-201ENST00000546911 POTEEQ6S8J3 1075 aa11.74□□□□□ -0.53
LINC02396-201ENST00000546911 CATSPERGQ6ZRH7 1159 aa11.74□□□□□ -0.53
LINC02396-201ENST00000546911 TMEM179Q6ZVK1 233 aa11.74□□□□□ -0.53
LINC02396-201ENST00000546911 C16orf86Q6ZW13 317 aa11.74□□□□□ -0.53
LINC02396-201ENST00000546911 SMC5Q8IY18 1101 aa11.74□□□□□ -0.53
LINC02396-201ENST00000546911 AMOTL1Q8IY63 956 aa11.74□□□□□ -0.53
LINC02396-201ENST00000546911 COA7Q96BR5 231 aa11.74□□□□□ -0.53
LINC02396-201ENST00000546911 PATL2C9JE40 543 aaKnown RBP11.73□□□□□ -0.53
LINC02396-201ENST00000546911 GPAA1O43292 621 aa11.73□□□□□ -0.53
LINC02396-201ENST00000546911 AKR1B1P15121 316 aa11.73□□□□□ -0.53
LINC02396-201ENST00000546911 GNAT2P19087 354 aa11.73□□□□□ -0.53
LINC02396-201ENST00000546911 PDE1AP54750 535 aa11.73□□□□□ -0.53
LINC02396-201ENST00000546911 IRF5Q13568 498 aa11.73□□□□□ -0.53
LINC02396-201ENST00000546911 GPRC5AQ8NFJ5 357 aa11.73□□□□□ -0.53
LINC02396-201ENST00000546911 SEC62Q99442 399 aaKnown RBP11.73□□□□□ -0.53
LINC02396-201ENST00000546911 FEZ1Q99689 392 aa11.73□□□□□ -0.53
LINC02396-201ENST00000546911 TXNRD2Q9NNW7 524 aa11.73□□□□□ -0.53
LINC02396-201ENST00000546911 GJD2Q9UKL4 321 aa11.73□□□□□ -0.53
LINC02396-201ENST00000546911 KIAA0100Q14667 2235 aaKnown RBP11.72□□□□□ -0.53
LINC02396-201ENST00000546911 ATAD5Q96QE3 1844 aa11.72□□□□□ -0.53
LINC02396-201ENST00000546911 M0R2C6 588 aa11.72□□□□□ -0.53
LINC02396-201ENST00000546911 ADCY3O60266 1144 aa11.72□□□□□ -0.53
LINC02396-201ENST00000546911 PEX10O60683 326 aa11.72□□□□□ -0.53
LINC02396-201ENST00000546911 MYCP01106 439 aaPredicted RBP11.72□□□□□ -0.53
LINC02396-201ENST00000546911 MTFR1Q15390 333 aa11.72□□□□□ -0.53
LINC02396-201ENST00000546911 ZMYM1Q5SVZ6 1142 aa11.72□□□□□ -0.53
LINC02396-201ENST00000546911 SLAIN1Q8ND83 568 aa11.72□□□□□ -0.53
LINC02396-201ENST00000546911 PXYLP1Q8TE99 480 aa11.72□□□□□ -0.53
LINC02396-201ENST00000546911 GTF3C2Q8WUA4 911 aaPredicted RBP11.72□□□□□ -0.53
LINC02396-201ENST00000546911 ARPP21Q9UBL0 812 aaPredicted RBP11.72□□□□□ -0.53
LINC02396-201ENST00000546911 MINDY4BA8MYZ0 360 aa11.71□□□□□ -0.53
LINC02396-201ENST00000546911 APPP05067 770 aa11.71□□□□□ -0.53
LINC02396-201ENST00000546911 VCAM1P19320 739 aa11.71□□□□□ -0.53
LINC02396-201ENST00000546911 B4GALNT3Q6L9W6 998 aa11.71□□□□□ -0.53
LINC02396-201ENST00000546911 LBX2Q6XYB7 198 aa11.71□□□□□ -0.53
LINC02396-201ENST00000546911 IFNL3Q8IZI9 196 aa11.71□□□□□ -0.53
LINC02396-201ENST00000546911 EVI5LQ96CN4 794 aa11.71□□□□□ -0.53
LINC02396-201ENST00000546911 FSD1Q9BTV5 496 aa11.71□□□□□ -0.53
LINC02396-201ENST00000546911 LNPKQ9C0E8 428 aa11.71□□□□□ -0.53
LINC02396-201ENST00000546911 RPAP3Q9H6T3 665 aaPredicted RBP11.71□□□□□ -0.53
LINC02396-201ENST00000546911 EPB41L4AQ9HCS5 686 aaPredicted RBP11.71□□□□□ -0.53
LINC02396-201ENST00000546911 HOXC10Q9NYD6 342 aa11.71□□□□□ -0.53
LINC02396-201ENST00000546911 BIN2Q9UBW5 565 aaPredicted RBP11.71□□□□□ -0.53
LINC02396-201ENST00000546911 TMX2Q9Y320 296 aa11.71□□□□□ -0.53
LINC02396-201ENST00000546911 RABGAP1Q9Y3P9 1069 aa11.71□□□□□ -0.53
LINC02396-201ENST00000546911 ZSWIM8A7E2V4 1837 aa11.71□□□□□ -0.54
LINC02396-201ENST00000546911 LOC285556D6RIA3 1793 aa11.7□□□□□ -0.54
LINC02396-201ENST00000546911 CNMDO75829 334 aa11.7□□□□□ -0.54
LINC02396-201ENST00000546911 ERVK-9P63128 1117 aa11.7□□□□□ -0.54
LINC02396-201ENST00000546911 ERVK-24P63145 666 aa11.7□□□□□ -0.54
LINC02396-201ENST00000546911 UBXN2AP68543 259 aa11.7□□□□□ -0.54
LINC02396-201ENST00000546911 NUCB1Q02818 461 aa11.7□□□□□ -0.54
LINC02396-201ENST00000546911 COG2Q14746 738 aa11.7□□□□□ -0.54
LINC02396-201ENST00000546911 KIAA1755Q5JYT7 1200 aa11.7□□□□□ -0.54
LINC02396-201ENST00000546911 TICAM2Q86XR7 235 aa11.7□□□□□ -0.54
LINC02396-201ENST00000546911 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.7□□□□□ -0.54
LINC02396-201ENST00000546911 KANSL2Q9H9L4 492 aa11.7□□□□□ -0.54
LINC02396-201ENST00000546911 MKNK2Q9HBH9 465 aa11.7□□□□□ -0.54
LINC02396-201ENST00000546911 DDX60LQ5H9U9 1706 aaKnown RBP11.69□□□□□ -0.54
LINC02396-201ENST00000546911 DOCK3Q8IZD9 2030 aa11.69□□□□□ -0.54
LINC02396-201ENST00000546911 GJB1P08034 283 aa11.69□□□□□ -0.54
LINC02396-201ENST00000546911 CCL5P13501 91 aa11.69□□□□□ -0.54
LINC02396-201ENST00000546911 EEF2P13639 858 aaKnown RBP11.69□□□□□ -0.54
LINC02396-201ENST00000546911 ELNP15502 786 aa11.69□□□□□ -0.54
LINC02396-201ENST00000546911 RASA1P20936 1047 aa11.69□□□□□ -0.54
LINC02396-201ENST00000546911 MAPK4P31152 587 aa11.69□□□□□ -0.54
LINC02396-201ENST00000546911 TDO2P48775 406 aa11.69□□□□□ -0.54
LINC02396-201ENST00000546911 ICA1Q05084 483 aa11.69□□□□□ -0.54
LINC02396-201ENST00000546911 CHD1LQ86WJ1 897 aa11.69□□□□□ -0.54
LINC02396-201ENST00000546911 CLEC10AQ8IUN9 316 aa11.69□□□□□ -0.54
LINC02396-201ENST00000546911 LPAR1Q92633 364 aa11.69□□□□□ -0.54
LINC02396-201ENST00000546911 PAGR1Q9BTK6 254 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms