RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 EPB41L4AQ9HCS5 686 aaPredicted RBP19.03■□□□□ 0.64
DDX54-204ENST00000546898 PATL2C9JE40 543 aaKnown RBP19.02■□□□□ 0.64
DDX54-204ENST00000546898 GUCY1A2P33402 732 aa19.02■□□□□ 0.64
DDX54-204ENST00000546898 TDO2P48775 406 aa19.02■□□□□ 0.64
DDX54-204ENST00000546898 IRX3P78415 501 aaPredicted RBP19.02■□□□□ 0.64
DDX54-204ENST00000546898 SEPT2Q15019 361 aa19.02■□□□□ 0.64
DDX54-204ENST00000546898 FAM110CQ1W6H9 321 aa19.02■□□□□ 0.64
DDX54-204ENST00000546898 PLEKHM2Q8IWE5 1019 aa19.02■□□□□ 0.64
DDX54-204ENST00000546898 SEC62Q99442 399 aaKnown RBP19.02■□□□□ 0.64
DDX54-204ENST00000546898 NACAP1Q9BZK3 213 aa19.02■□□□□ 0.64
DDX54-204ENST00000546898 ARHGAP39Q9C0H5 1083 aa19.02■□□□□ 0.64
DDX54-204ENST00000546898 ASCC2Q9H1I8 757 aaPredicted RBP19.02■□□□□ 0.64
DDX54-204ENST00000546898 HOXD10P28358 340 aa19.01■□□□□ 0.63
DDX54-204ENST00000546898 PSMC4P43686 418 aa19.01■□□□□ 0.63
DDX54-204ENST00000546898 EMILIN3Q9NT22 766 aa19.01■□□□□ 0.63
DDX54-204ENST00000546898 APPP05067 770 aa19■□□□□ 0.63
DDX54-204ENST00000546898 AKR1B1P15121 316 aa19■□□□□ 0.63
DDX54-204ENST00000546898 FCGRTP55899 365 aa19■□□□□ 0.63
DDX54-204ENST00000546898 IFNL3Q8IZI9 196 aa19■□□□□ 0.63
DDX54-204ENST00000546898 GTF3C2Q8WUA4 911 aaPredicted RBP19■□□□□ 0.63
DDX54-204ENST00000546898 TRIM47Q96LD4 638 aa19■□□□□ 0.63
DDX54-204ENST00000546898 HELLSQ9NRZ9 838 aa19■□□□□ 0.63
DDX54-204ENST00000546898 DOCK3Q8IZD9 2030 aa19■□□□□ 0.63
DDX54-204ENST00000546898 MINDY4BA8MYZ0 360 aa18.99■□□□□ 0.63
DDX54-204ENST00000546898 TRIM6-TRIM34B2RNG4 842 aa18.99■□□□□ 0.63
DDX54-204ENST00000546898 SMIM22K7EJ46 135 aa18.99■□□□□ 0.63
DDX54-204ENST00000546898 FMNL1O95466 1100 aaPredicted RBP18.99■□□□□ 0.63
DDX54-204ENST00000546898 CTGFP29279 349 aa18.99■□□□□ 0.63
DDX54-204ENST00000546898 MLLT1Q03111 559 aaPredicted RBP18.99■□□□□ 0.63
DDX54-204ENST00000546898 ANKRD13CQ8N6S4 541 aa18.99■□□□□ 0.63
DDX54-204ENST00000546898 ACER1Q8TDN7 264 aa18.99■□□□□ 0.63
DDX54-204ENST00000546898 SH2D4AQ9H788 454 aa18.99■□□□□ 0.63
DDX54-204ENST00000546898 ZNF287Q9HBT7 754 aa18.99■□□□□ 0.63
DDX54-204ENST00000546898 ARHGEF10LQ9HCE6 1279 aa18.99■□□□□ 0.63
DDX54-204ENST00000546898 SRRDQ9UH36 339 aa18.99■□□□□ 0.63
DDX54-204ENST00000546898 PTCH2Q9Y6C5 1203 aa18.99■□□□□ 0.63
DDX54-204ENST00000546898 MYH4Q9Y623 1939 aa18.98■□□□□ 0.63
DDX54-204ENST00000546898 PARP14Q460N5 1801 aa18.98■□□□□ 0.63
DDX54-204ENST00000546898 HTTP42858 3142 aa18.98■□□□□ 0.63
DDX54-204ENST00000546898 VCAM1P19320 739 aa18.98■□□□□ 0.63
DDX54-204ENST00000546898 ICA1Q05084 483 aa18.98■□□□□ 0.63
DDX54-204ENST00000546898 ZYXQ15942 572 aaKnown RBP18.98■□□□□ 0.63
DDX54-204ENST00000546898 ARMC5Q96C12 935 aa18.98■□□□□ 0.63
DDX54-204ENST00000546898 NAPBQ9H115 298 aa18.98■□□□□ 0.63
DDX54-204ENST00000546898 MORF4L1Q9UBU8 362 aa18.98■□□□□ 0.63
DDX54-204ENST00000546898 USP17L15C9J2P7 530 aa18.97■□□□□ 0.63
DDX54-204ENST00000546898 USP17L13C9JLJ4 530 aa18.97■□□□□ 0.63
DDX54-204ENST00000546898 USP17L11C9JVI0 530 aa18.97■□□□□ 0.63
DDX54-204ENST00000546898 USP17L18D6R9N7 530 aa18.97■□□□□ 0.63
DDX54-204ENST00000546898 USP17L22D6RA61 530 aa18.97■□□□□ 0.63
DDX54-204ENST00000546898 USP17L17D6RBQ6 530 aa18.97■□□□□ 0.63
DDX54-204ENST00000546898 USP17L19D6RCP7 530 aa18.97■□□□□ 0.63
DDX54-204ENST00000546898 USP17L20D6RJB6 530 aa18.97■□□□□ 0.63
DDX54-204ENST00000546898 RGS19P49795 217 aa18.97■□□□□ 0.63
DDX54-204ENST00000546898 HERVK_113P62684 666 aa18.97■□□□□ 0.63
DDX54-204ENST00000546898 USP17L24Q0WX57 530 aa18.97■□□□□ 0.63
DDX54-204ENST00000546898 RILPL2Q969X0 211 aa18.97■□□□□ 0.63
DDX54-204ENST00000546898 MYPNQ86TC9 1320 aa18.97■□□□□ 0.63
DDX54-204ENST00000546898 A0A0G2JMZ2 1700 aa18.97■□□□□ 0.63
DDX54-204ENST00000546898 RLFQ13129 1914 aa18.96■□□□□ 0.63
DDX54-204ENST00000546898 A0A1W2PRG0 241 aa18.96■□□□□ 0.63
DDX54-204ENST00000546898 RASA1P20936 1047 aa18.96■□□□□ 0.63
DDX54-204ENST00000546898 SLC9C1Q4G0N8 1177 aa18.96■□□□□ 0.63
DDX54-204ENST00000546898 MCMDC2Q4G0Z9 681 aa18.96■□□□□ 0.63
DDX54-204ENST00000546898 CCDC129Q6ZRS4 1044 aa18.96■□□□□ 0.63
DDX54-204ENST00000546898 P2RX7Q99572 595 aaKnown RBP18.96■□□□□ 0.63
DDX54-204ENST00000546898 KANSL2Q9H9L4 492 aa18.96■□□□□ 0.63
DDX54-204ENST00000546898 MKNK2Q9HBH9 465 aa18.96■□□□□ 0.63
DDX54-204ENST00000546898 TMX2Q9Y320 296 aa18.96■□□□□ 0.63
DDX54-204ENST00000546898 KIAA0100Q14667 2235 aaKnown RBP18.95■□□□□ 0.62
DDX54-204ENST00000546898 A0A0D9SFI3 127 aa18.95■□□□□ 0.62
DDX54-204ENST00000546898 TNPO2O14787 897 aaKnown RBP18.95■□□□□ 0.62
DDX54-204ENST00000546898 ECM2O94769 699 aaPredicted RBP18.95■□□□□ 0.62
DDX54-204ENST00000546898 SLC3A2P08195 630 aaKnown RBP18.95■□□□□ 0.62
DDX54-204ENST00000546898 CATSPERGQ6ZRH7 1159 aa18.95■□□□□ 0.62
DDX54-204ENST00000546898 NBPF11Q86T75 865 aa18.95■□□□□ 0.62
DDX54-204ENST00000546898 LPAR1Q92633 364 aa18.95■□□□□ 0.62
DDX54-204ENST00000546898 FOXP2O15409 715 aa18.94■□□□□ 0.62
DDX54-204ENST00000546898 SOX10P56693 466 aa18.94■□□□□ 0.62
DDX54-204ENST00000546898 PDE4BQ07343 736 aa18.94■□□□□ 0.62
DDX54-204ENST00000546898 PPARAQ07869 468 aa18.94■□□□□ 0.62
DDX54-204ENST00000546898 NMIQ13287 307 aaPredicted RBP18.94■□□□□ 0.62
DDX54-204ENST00000546898 LBX2Q6XYB7 198 aa18.94■□□□□ 0.62
DDX54-204ENST00000546898 CLEC10AQ8IUN9 316 aa18.94■□□□□ 0.62
DDX54-204ENST00000546898 RAET1EQ8TD07 263 aa18.94■□□□□ 0.62
DDX54-204ENST00000546898 COA7Q96BR5 231 aa18.94■□□□□ 0.62
DDX54-204ENST00000546898 FAM227BQ96M60 508 aa18.94■□□□□ 0.62
DDX54-204ENST00000546898 RPAP3Q9H6T3 665 aaPredicted RBP18.94■□□□□ 0.62
DDX54-204ENST00000546898 PLXNB2O15031 1838 aa18.94■□□□□ 0.62
DDX54-204ENST00000546898 LAMA4Q16363 1823 aa18.94■□□□□ 0.62
DDX54-204ENST00000546898 ZMYM6O95789 1325 aa18.94■□□□□ 0.62
DDX54-204ENST00000546898 HIP1O00291 1037 aa18.93■□□□□ 0.62
DDX54-204ENST00000546898 PDE4AP27815 886 aa18.93■□□□□ 0.62
DDX54-204ENST00000546898 MFAP1P55081 439 aaKnown RBP18.93■□□□□ 0.62
DDX54-204ENST00000546898 PRKCZQ05513 592 aa18.93■□□□□ 0.62
DDX54-204ENST00000546898 SIAH1Q8IUQ4 282 aa18.93■□□□□ 0.62
DDX54-204ENST00000546898 GPRC5AQ8NFJ5 357 aa18.93■□□□□ 0.62
DDX54-204ENST00000546898 ZNF333Q96JL9 665 aa18.93■□□□□ 0.62
DDX54-204ENST00000546898 VCPKMTQ9H867 229 aa18.93■□□□□ 0.62
DDX54-204ENST00000546898 CCDC171Q6TFL3 1326 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms