RNA–Protein interactions for RNA: ENST00000546603.5

CPNE8-204, Transcript of copine 8, humanhuman

TSL 3

Gene CPNE8, Length 1,036 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-204ENST00000546603 SPON2Q9BUD6 331 aa9.67□□□□□ -0.86
CPNE8-204ENST00000546603 UBP1Q9NZI7 540 aa9.67□□□□□ -0.86
CPNE8-204ENST00000546603 PCDHB14Q9Y5E9 798 aa9.67□□□□□ -0.86
CPNE8-204ENST00000546603 CAPN6Q9Y6Q1 641 aa9.67□□□□□ -0.86
CPNE8-204ENST00000546603 CHURC1-FNTBB4DL54 471 aa9.66□□□□□ -0.86
CPNE8-204ENST00000546603 FUT4P22083 530 aa9.66□□□□□ -0.86
CPNE8-204ENST00000546603 SEZ6Q53EL9 994 aa9.66□□□□□ -0.86
CPNE8-204ENST00000546603 ANGEL2Q5VTE6 544 aaKnown RBP9.66□□□□□ -0.86
CPNE8-204ENST00000546603 MCTP1Q6DN14 999 aa9.66□□□□□ -0.86
CPNE8-204ENST00000546603 REXO1Q8N1G1 1221 aaKnown RBP9.66□□□□□ -0.86
CPNE8-204ENST00000546603 MRRFQ96E11 262 aaKnown RBP9.66□□□□□ -0.86
CPNE8-204ENST00000546603 PITPNM2Q9BZ72 1349 aa9.65□□□□□ -0.86
CPNE8-204ENST00000546603 CD96P40200 585 aa9.65□□□□□ -0.86
CPNE8-204ENST00000546603 PIWIL2Q8TC59 973 aaKnown RBP9.65□□□□□ -0.86
CPNE8-204ENST00000546603 PPP1R13LQ8WUF5 828 aa9.65□□□□□ -0.86
CPNE8-204ENST00000546603 NKD1Q969G9 470 aa9.65□□□□□ -0.86
CPNE8-204ENST00000546603 CCDC74BQ96LY2 380 aa9.65□□□□□ -0.86
CPNE8-204ENST00000546603 HSPA12BQ96MM6 686 aa9.65□□□□□ -0.86
CPNE8-204ENST00000546603 EHMT1Q9H9B1 1298 aa9.65□□□□□ -0.86
CPNE8-204ENST00000546603 TNNI2P48788 182 aa9.64□□□□□ -0.87
CPNE8-204ENST00000546603 ZNF165P49910 485 aa9.64□□□□□ -0.87
CPNE8-204ENST00000546603 CDKAL1Q5VV42 579 aa9.64□□□□□ -0.87
CPNE8-204ENST00000546603 CBLL1Q75N03 491 aa9.64□□□□□ -0.87
CPNE8-204ENST00000546603 SLITRK4Q8IW52 837 aa9.64□□□□□ -0.87
CPNE8-204ENST00000546603 TAL1P17542 331 aaPredicted RBP9.63□□□□□ -0.87
CPNE8-204ENST00000546603 MCM4P33991 863 aa9.63□□□□□ -0.87
CPNE8-204ENST00000546603 IKZF1Q13422 519 aa9.63□□□□□ -0.87
CPNE8-204ENST00000546603 ZNF394Q53GI3 561 aa9.63□□□□□ -0.87
CPNE8-204ENST00000546603 PHACTR4Q8IZ21 702 aa9.63□□□□□ -0.87
CPNE8-204ENST00000546603 PI4K2BQ8TCG2 481 aa9.63□□□□□ -0.87
CPNE8-204ENST00000546603 EAF1Q96JC9 268 aaPredicted RBP9.63□□□□□ -0.87
CPNE8-204ENST00000546603 SEMA3GQ9NS98 782 aa9.63□□□□□ -0.87
CPNE8-204ENST00000546603 GMIPQ9P107 970 aa9.63□□□□□ -0.87
CPNE8-204ENST00000546603 ST14Q9Y5Y6 855 aa9.63□□□□□ -0.87
CPNE8-204ENST00000546603 SLC22A31A6NKX4 558 aa9.62□□□□□ -0.87
CPNE8-204ENST00000546603 DNAJA2O60884 412 aa9.62□□□□□ -0.87
CPNE8-204ENST00000546603 TNK2Q07912 1038 aa9.62□□□□□ -0.87
CPNE8-204ENST00000546603 ZNF792Q3KQV3 632 aa9.62□□□□□ -0.87
CPNE8-204ENST00000546603 THAP5Q7Z6K1 395 aa9.62□□□□□ -0.87
CPNE8-204ENST00000546603 LMCD1Q9NZU5 365 aa9.62□□□□□ -0.87
CPNE8-204ENST00000546603 DDX41Q9UJV9 622 aaKnown RBP9.62□□□□□ -0.87
CPNE8-204ENST00000546603 SLC23A3Q6PIS1 610 aa9.61□□□□□ -0.87
CPNE8-204ENST00000546603 GK5Q6ZS86 529 aa9.61□□□□□ -0.87
CPNE8-204ENST00000546603 BAHD1Q8TBE0 780 aaPredicted RBP9.61□□□□□ -0.87
CPNE8-204ENST00000546603 RNF141Q8WVD5 230 aa9.61□□□□□ -0.87
CPNE8-204ENST00000546603 KIAA1522Q9P206 1035 aaPredicted RBP9.61□□□□□ -0.87
CPNE8-204ENST00000546603 KCNH3Q9ULD8 1083 aa9.61□□□□□ -0.87
CPNE8-204ENST00000546603 PCDHGB7Q9Y5F8 929 aa9.61□□□□□ -0.87
CPNE8-204ENST00000546603 H3BS24 57 aa9.6□□□□□ -0.87
CPNE8-204ENST00000546603 RGS13O14921 159 aa9.6□□□□□ -0.87
CPNE8-204ENST00000546603 GBP1P32455 592 aa9.6□□□□□ -0.87
CPNE8-204ENST00000546603 CHMP4BP1P59074 171 aa9.6□□□□□ -0.87
CPNE8-204ENST00000546603 CLCQ05315 142 aa9.6□□□□□ -0.87
CPNE8-204ENST00000546603 ZP2Q05996 745 aa9.6□□□□□ -0.87
CPNE8-204ENST00000546603 LRRFIP1Q32MZ4 808 aaKnown RBP9.6□□□□□ -0.87
CPNE8-204ENST00000546603 ARSHQ5FYA8 562 aa9.6□□□□□ -0.87
CPNE8-204ENST00000546603 ZNF654Q8IZM8 581 aa9.6□□□□□ -0.87
CPNE8-204ENST00000546603 KIF2CQ99661 725 aa9.6□□□□□ -0.87
CPNE8-204ENST00000546603 UNCXA6NJT0 531 aa9.59□□□□□ -0.87
CPNE8-204ENST00000546603 RAG1P15918 1043 aa9.59□□□□□ -0.87
CPNE8-204ENST00000546603 CDCP2Q5VXM1 449 aa9.59□□□□□ -0.87
CPNE8-204ENST00000546603 UBE2FQ969M7 185 aa9.59□□□□□ -0.87
CPNE8-204ENST00000546603 Q96M66 194 aa9.59□□□□□ -0.87
CPNE8-204ENST00000546603 KREMEN1Q96MU8 473 aa9.59□□□□□ -0.87
CPNE8-204ENST00000546603 ATP13A1Q9HD20 1204 aa9.59□□□□□ -0.87
CPNE8-204ENST00000546603 MBNL3Q9NUK0 354 aaKnown RBP9.59□□□□□ -0.87
CPNE8-204ENST00000546603 RACK1P63244 317 aaKnown RBP9.58□□□□□ -0.88
CPNE8-204ENST00000546603 METTL16Q86W50 562 aaKnown RBP9.58□□□□□ -0.88
CPNE8-204ENST00000546603 ASPNQ9BXN1 380 aa9.58□□□□□ -0.88
CPNE8-204ENST00000546603 TRIT1Q9H3H1 467 aaKnown RBP9.58□□□□□ -0.88
CPNE8-204ENST00000546603 ZSWIM5Q9P217 1185 aa9.58□□□□□ -0.88
CPNE8-204ENST00000546603 RNASE1P07998 156 aaKnown RBP9.57□□□□□ -0.88
CPNE8-204ENST00000546603 OVOS1Q6IE37 1185 aa9.57□□□□□ -0.88
CPNE8-204ENST00000546603 CNNM2Q9H8M5 875 aa9.57□□□□□ -0.88
CPNE8-204ENST00000546603 RC3H2Q9HBD1 1191 aaKnown RBP9.57□□□□□ -0.88
CPNE8-204ENST00000546603 ADAMTS6Q9UKP5 1117 aa9.57□□□□□ -0.88
CPNE8-204ENST00000546603 BIN1O00499 593 aa9.56□□□□□ -0.88
CPNE8-204ENST00000546603 IMPDH2P12268 514 aa9.56□□□□□ -0.88
CPNE8-204ENST00000546603 JUNBP17275 347 aaPredicted RBP9.56□□□□□ -0.88
CPNE8-204ENST00000546603 TMPRSS7Q7RTY8 843 aa9.56□□□□□ -0.88
CPNE8-204ENST00000546603 DTWD2Q8NBA8 298 aa9.56□□□□□ -0.88
CPNE8-204ENST00000546603 TMEM40Q8WWA1 233 aa9.56□□□□□ -0.88
CPNE8-204ENST00000546603 ATG4CQ96DT6 458 aa9.56□□□□□ -0.88
CPNE8-204ENST00000546603 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.56□□□□□ -0.88
CPNE8-204ENST00000546603 GPATCH2Q9NW75 528 aa9.56□□□□□ -0.88
CPNE8-204ENST00000546603 PAX4O43316 350 aa9.55□□□□□ -0.88
CPNE8-204ENST00000546603 ITGB5P18084 799 aa9.55□□□□□ -0.88
CPNE8-204ENST00000546603 CCNFP41002 786 aa9.55□□□□□ -0.88
CPNE8-204ENST00000546603 HDLBPQ00341 1268 aaKnown RBP9.55□□□□□ -0.88
CPNE8-204ENST00000546603 RAD51AP2Q09MP3 1159 aa9.55□□□□□ -0.88
CPNE8-204ENST00000546603 NLRC3Q7RTR2 1065 aa9.55□□□□□ -0.88
CPNE8-204ENST00000546603 ATG4DQ86TL0 474 aaPredicted RBP9.55□□□□□ -0.88
CPNE8-204ENST00000546603 NT5DC4Q86YG4 428 aa9.55□□□□□ -0.88
CPNE8-204ENST00000546603 GPR62Q9BZJ7 368 aa9.55□□□□□ -0.88
CPNE8-204ENST00000546603 DUSP15Q9H1R2 295 aaPredicted RBP9.55□□□□□ -0.88
CPNE8-204ENST00000546603 CARS2Q9HA77 564 aaKnown RBP9.55□□□□□ -0.88
CPNE8-204ENST00000546603 MEIS3P2A8K0S8 358 aa9.54□□□□□ -0.88
CPNE8-204ENST00000546603 UBOX5O94941 541 aa9.54□□□□□ -0.88
CPNE8-204ENST00000546603 RNF4P78317 190 aa9.54□□□□□ -0.88
CPNE8-204ENST00000546603 SPATA32Q96LK8 384 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms