RNA–Protein interactions for RNA: ENST00000546537.6

TMEM116-203, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-203ENST00000546537 FERMT2Q96AC1 680 aa13.4□□□□□ -0.26
TMEM116-203ENST00000546537 GINM1Q9NU53 330 aa13.4□□□□□ -0.26
TMEM116-203ENST00000546537 IVNS1ABPQ9Y6Y0 642 aa13.4□□□□□ -0.26
TMEM116-203ENST00000546537 FOCADQ5VW36 1801 aa13.4□□□□□ -0.26
TMEM116-203ENST00000546537 KIAA0355O15063 1070 aa13.39□□□□□ -0.27
TMEM116-203ENST00000546537 SEPT4O43236 478 aa13.39□□□□□ -0.27
TMEM116-203ENST00000546537 RAG1P15918 1043 aa13.39□□□□□ -0.27
TMEM116-203ENST00000546537 LRRC41Q15345 812 aa13.39□□□□□ -0.27
TMEM116-203ENST00000546537 SHROOM1Q2M3G4 852 aaPredicted RBP13.39□□□□□ -0.27
TMEM116-203ENST00000546537 OLFML2BQ68BL8 750 aa13.39□□□□□ -0.27
TMEM116-203ENST00000546537 USP17L2Q6R6M4 530 aa13.39□□□□□ -0.27
TMEM116-203ENST00000546537 METTL16Q86W50 562 aaKnown RBP13.39□□□□□ -0.27
TMEM116-203ENST00000546537 IL27Q8NEV9 243 aa13.39□□□□□ -0.27
TMEM116-203ENST00000546537 SIL1Q9H173 461 aa13.39□□□□□ -0.27
TMEM116-203ENST00000546537 DNAJC18Q9H819 358 aa13.39□□□□□ -0.27
TMEM116-203ENST00000546537 MYCNP04198 464 aaPredicted RBP13.38□□□□□ -0.27
TMEM116-203ENST00000546537 LDHCP07864 332 aa13.38□□□□□ -0.27
TMEM116-203ENST00000546537 GSTO1P78417 241 aa13.38□□□□□ -0.27
TMEM116-203ENST00000546537 LBX2Q6XYB7 198 aa13.38□□□□□ -0.27
TMEM116-203ENST00000546537 NSUN4Q96CB9 384 aaKnown RBP13.38□□□□□ -0.27
TMEM116-203ENST00000546537 C12orf42Q96LP6 360 aa13.38□□□□□ -0.27
TMEM116-203ENST00000546537 DHX36Q9H2U1 1008 aaKnown RBP13.38□□□□□ -0.27
TMEM116-203ENST00000546537 PRDM12Q9H4Q4 367 aa13.38□□□□□ -0.27
TMEM116-203ENST00000546537 BTBD7Q9P203 1132 aa13.38□□□□□ -0.27
TMEM116-203ENST00000546537 ZBTB21Q9ULJ3 1066 aa13.38□□□□□ -0.27
TMEM116-203ENST00000546537 HCN4Q9Y3Q4 1203 aa13.38□□□□□ -0.27
TMEM116-203ENST00000546537 MYO9BQ13459 2157 aa13.38□□□□□ -0.27
TMEM116-203ENST00000546537 XIRP2A4UGR9 3374 aa13.37□□□□□ -0.27
TMEM116-203ENST00000546537 USP17L15C9J2P7 530 aa13.37□□□□□ -0.27
TMEM116-203ENST00000546537 USP17L13C9JLJ4 530 aa13.37□□□□□ -0.27
TMEM116-203ENST00000546537 USP17L11C9JVI0 530 aa13.37□□□□□ -0.27
TMEM116-203ENST00000546537 USP17L18D6R9N7 530 aa13.37□□□□□ -0.27
TMEM116-203ENST00000546537 USP17L22D6RA61 530 aa13.37□□□□□ -0.27
TMEM116-203ENST00000546537 USP17L17D6RBQ6 530 aa13.37□□□□□ -0.27
TMEM116-203ENST00000546537 USP17L19D6RCP7 530 aa13.37□□□□□ -0.27
TMEM116-203ENST00000546537 USP17L20D6RJB6 530 aa13.37□□□□□ -0.27
TMEM116-203ENST00000546537 GDF11O95390 407 aa13.37□□□□□ -0.27
TMEM116-203ENST00000546537 BMP1P13497 986 aa13.37□□□□□ -0.27
TMEM116-203ENST00000546537 IL15P40933 162 aaPredicted RBP13.37□□□□□ -0.27
TMEM116-203ENST00000546537 USP17L24Q0WX57 530 aa13.37□□□□□ -0.27
TMEM116-203ENST00000546537 ADGRE1Q14246 886 aa13.37□□□□□ -0.27
TMEM116-203ENST00000546537 CCDC85BQ15834 202 aaPredicted RBP13.37□□□□□ -0.27
TMEM116-203ENST00000546537 CATSPERGQ6ZRH7 1159 aa13.37□□□□□ -0.27
TMEM116-203ENST00000546537 FOXP4Q8IVH2 680 aaPredicted RBP13.37□□□□□ -0.27
TMEM116-203ENST00000546537 TEX11Q8IYF3 940 aa13.37□□□□□ -0.27
TMEM116-203ENST00000546537 NECAB3Q96P71 396 aaPredicted RBP13.37□□□□□ -0.27
TMEM116-203ENST00000546537 LRFN3Q9BTN0 628 aa13.37□□□□□ -0.27
TMEM116-203ENST00000546537 PBX4Q9BYU1 374 aa13.37□□□□□ -0.27
TMEM116-203ENST00000546537 PHF24Q9UPV7 400 aa13.37□□□□□ -0.27
TMEM116-203ENST00000546537 GBF1Q92538 1859 aa13.37□□□□□ -0.27
TMEM116-203ENST00000546537 SMCHD1A6NHR9 2005 aa13.37□□□□□ -0.27
TMEM116-203ENST00000546537 CHD9Q3L8U1 2897 aa13.36□□□□□ -0.27
TMEM116-203ENST00000546537 PBX2P40425 430 aa13.36□□□□□ -0.27
TMEM116-203ENST00000546537 TIMM10P62072 90 aa13.36□□□□□ -0.27
TMEM116-203ENST00000546537 FAM47AQ5JRC9 791 aa13.36□□□□□ -0.27
TMEM116-203ENST00000546537 DPP9Q86TI2 863 aa13.36□□□□□ -0.27
TMEM116-203ENST00000546537 SH3RF3Q8TEJ3 882 aaPredicted RBP13.36□□□□□ -0.27
TMEM116-203ENST00000546537 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.36□□□□□ -0.27
TMEM116-203ENST00000546537 REV3LO60673 3130 aa13.35□□□□□ -0.27
TMEM116-203ENST00000546537 STRNO43815 780 aa13.35□□□□□ -0.27
TMEM116-203ENST00000546537 ADORA2AP29274 412 aa13.35□□□□□ -0.27
TMEM116-203ENST00000546537 TMEM39AQ9NV64 488 aa13.35□□□□□ -0.27
TMEM116-203ENST00000546537 CXXC1Q9P0U4 656 aaPredicted RBP13.35□□□□□ -0.27
TMEM116-203ENST00000546537 GRXCR1A8MXD5 290 aa13.34□□□□□ -0.27
TMEM116-203ENST00000546537 PQBP1O60828 265 aaKnown RBP13.34□□□□□ -0.27
TMEM116-203ENST00000546537 FAAP100Q0VG06 881 aa13.34□□□□□ -0.27
TMEM116-203ENST00000546537 ZYXQ15942 572 aaKnown RBP13.34□□□□□ -0.27
TMEM116-203ENST00000546537 PRAMEF19Q5SWL8 479 aa13.34□□□□□ -0.27
TMEM116-203ENST00000546537 RASIP1Q5U651 963 aa13.34□□□□□ -0.27
TMEM116-203ENST00000546537 CCDC129Q6ZRS4 1044 aa13.34□□□□□ -0.27
TMEM116-203ENST00000546537 CRACR2BQ8N4Y2 399 aaPredicted RBP13.34□□□□□ -0.27
TMEM116-203ENST00000546537 SLC44A5Q8NCS7 719 aa13.34□□□□□ -0.27
TMEM116-203ENST00000546537 TOX2Q96NM4 488 aa13.34□□□□□ -0.27
TMEM116-203ENST00000546537 TRIM34Q9BYJ4 488 aa13.34□□□□□ -0.27
TMEM116-203ENST00000546537 HMG20BQ9P0W2 317 aa13.34□□□□□ -0.27
TMEM116-203ENST00000546537 SALL2Q9Y467 1007 aaPredicted RBP13.34□□□□□ -0.27
TMEM116-203ENST00000546537 ZNFX1Q9P2E3 1918 aaKnown RBP13.34□□□□□ -0.27
TMEM116-203ENST00000546537 PTPRCP08575 1304 aa13.34□□□□□ -0.27
TMEM116-203ENST00000546537 A0A0G2JMZ2 1700 aa13.33□□□□□ -0.27
TMEM116-203ENST00000546537 SPDYE16A6NNV3 312 aaPredicted RBP13.33□□□□□ -0.28
TMEM116-203ENST00000546537 VCAM1P19320 739 aa13.33□□□□□ -0.28
TMEM116-203ENST00000546537 IGFBP4P22692 258 aa13.33□□□□□ -0.28
TMEM116-203ENST00000546537 CCDC184Q52MB2 194 aa13.33□□□□□ -0.28
TMEM116-203ENST00000546537 TBC1D9Q6ZT07 1266 aa13.33□□□□□ -0.28
TMEM116-203ENST00000546537 ANKRD33Q7Z3H0 272 aa13.33□□□□□ -0.28
TMEM116-203ENST00000546537 MRPL50Q8N5N7 158 aaKnown RBP13.33□□□□□ -0.28
TMEM116-203ENST00000546537 XAGE2Q96GT9 111 aa13.33□□□□□ -0.28
TMEM116-203ENST00000546537 FEZ1Q99689 392 aa13.33□□□□□ -0.28
TMEM116-203ENST00000546537 TSPYL2Q9H2G4 693 aaPredicted RBP13.33□□□□□ -0.28
TMEM116-203ENST00000546537 EPHX3Q9H6B9 360 aa13.33□□□□□ -0.28
TMEM116-203ENST00000546537 XPNPEP3Q9NQH7 507 aa13.33□□□□□ -0.28
TMEM116-203ENST00000546537 RAI14Q9P0K7 980 aa13.33□□□□□ -0.28
TMEM116-203ENST00000546537 PALD1Q9ULE6 856 aa13.33□□□□□ -0.28
TMEM116-203ENST00000546537 A0A1B0GUL7 405 aa13.32□□□□□ -0.28
TMEM116-203ENST00000546537 A0A1W2PQ45 241 aaPredicted RBP13.32□□□□□ -0.28
TMEM116-203ENST00000546537 A0A1W2PQY0 241 aa13.32□□□□□ -0.28
TMEM116-203ENST00000546537 COBLO75128 1261 aa13.32□□□□□ -0.28
TMEM116-203ENST00000546537 TIMP1P01033 207 aa13.32□□□□□ -0.28
TMEM116-203ENST00000546537 GH2P01242 217 aa13.32□□□□□ -0.28
TMEM116-203ENST00000546537 USP14P54578 494 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms