RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 USP17L3A6NCW0 530 aa11.09□□□□□ -0.63
TRAF1-203ENST00000546084 USP17L4A6NCW7 530 aa11.09□□□□□ -0.63
TRAF1-203ENST00000546084 PP2D1A8MPX8 630 aa11.09□□□□□ -0.63
TRAF1-203ENST00000546084 PDE4BQ07343 736 aa11.09□□□□□ -0.63
TRAF1-203ENST00000546084 INF2Q27J81 1249 aa11.09□□□□□ -0.63
TRAF1-203ENST00000546084 SHC4Q6S5L8 630 aa11.09□□□□□ -0.63
TRAF1-203ENST00000546084 USP17L1Q7RTZ2 530 aa11.09□□□□□ -0.63
TRAF1-203ENST00000546084 NBPF11Q86T75 865 aa11.09□□□□□ -0.63
TRAF1-203ENST00000546084 MB21D2Q8IYB1 491 aaPredicted RBP11.09□□□□□ -0.63
TRAF1-203ENST00000546084 CCDC47Q96A33 483 aaKnown RBP11.09□□□□□ -0.63
TRAF1-203ENST00000546084 MON2Q7Z3U7 1717 aa11.09□□□□□ -0.63
TRAF1-203ENST00000546084 SH2B2O14492 632 aaPredicted RBP11.09□□□□□ -0.63
TRAF1-203ENST00000546084 ZMYND10O75800 440 aa11.09□□□□□ -0.63
TRAF1-203ENST00000546084 PNMA6AP0CW24 399 aaPredicted RBP11.09□□□□□ -0.63
TRAF1-203ENST00000546084 HIBADHP31937 336 aaKnown RBP11.09□□□□□ -0.63
TRAF1-203ENST00000546084 TXKP42681 527 aa11.09□□□□□ -0.63
TRAF1-203ENST00000546084 TDRD12Q587J7 1177 aaKnown RBP11.09□□□□□ -0.63
TRAF1-203ENST00000546084 SYMPKQ92797 1274 aaKnown RBP11.09□□□□□ -0.63
TRAF1-203ENST00000546084 OSBPL5Q9H0X9 879 aaPredicted RBP11.09□□□□□ -0.63
TRAF1-203ENST00000546084 ZCCHC17Q9NP64 241 aaKnown RBP11.09□□□□□ -0.63
TRAF1-203ENST00000546084 JADE2Q9NQC1 790 aa11.09□□□□□ -0.63
TRAF1-203ENST00000546084 ZMYM6O95789 1325 aa11.08□□□□□ -0.64
TRAF1-203ENST00000546084 FRMPD2Q68DX3 1309 aaPredicted RBP11.08□□□□□ -0.64
TRAF1-203ENST00000546084 ENC1O14682 589 aa11.08□□□□□ -0.64
TRAF1-203ENST00000546084 YEATS4O95619 227 aa11.08□□□□□ -0.64
TRAF1-203ENST00000546084 CMA1P23946 247 aa11.08□□□□□ -0.64
TRAF1-203ENST00000546084 HSP90B2PQ58FF3 399 aa11.08□□□□□ -0.64
TRAF1-203ENST00000546084 KRBA2Q6ZNG9 492 aa11.08□□□□□ -0.64
TRAF1-203ENST00000546084 ANKRD13CQ8N6S4 541 aa11.08□□□□□ -0.64
TRAF1-203ENST00000546084 TMEM87BQ96K49 555 aa11.08□□□□□ -0.64
TRAF1-203ENST00000546084 PSMD1Q99460 953 aa11.08□□□□□ -0.64
TRAF1-203ENST00000546084 SEPT11Q9NVA2 429 aaKnown RBP11.08□□□□□ -0.64
TRAF1-203ENST00000546084 KDM6AO15550 1401 aaPredicted RBP11.08□□□□□ -0.64
TRAF1-203ENST00000546084 MROH7-TTC4A0A0A0MT08 1334 aa11.08□□□□□ -0.64
TRAF1-203ENST00000546084 PSDA5PKW4 1024 aaPredicted RBP11.08□□□□□ -0.64
TRAF1-203ENST00000546084 LMAN1P49257 510 aa11.08□□□□□ -0.64
TRAF1-203ENST00000546084 TTC38Q5R3I4 469 aa11.08□□□□□ -0.64
TRAF1-203ENST00000546084 RIPOR2Q9Y4F9 1068 aa11.08□□□□□ -0.64
TRAF1-203ENST00000546084 DEXIO95424 95 aa11.08□□□□□ -0.64
TRAF1-203ENST00000546084 KCTD19Q17RG1 926 aaPredicted RBP11.08□□□□□ -0.64
TRAF1-203ENST00000546084 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.08□□□□□ -0.64
TRAF1-203ENST00000546084 SEC63Q9UGP8 760 aaKnown RBP11.08□□□□□ -0.64
TRAF1-203ENST00000546084 HPS5Q9UPZ3 1129 aa11.08□□□□□ -0.64
TRAF1-203ENST00000546084 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.08□□□□□ -0.64
TRAF1-203ENST00000546084 SPATA31D1Q6ZQQ2 1576 aa11.08□□□□□ -0.64
TRAF1-203ENST00000546084 SOWAHDA6NJG2 315 aa11.07□□□□□ -0.64
TRAF1-203ENST00000546084 SCNN1DP51172 638 aa11.07□□□□□ -0.64
TRAF1-203ENST00000546084 SLC51AQ86UW1 340 aa11.07□□□□□ -0.64
TRAF1-203ENST00000546084 CLEC10AQ8IUN9 316 aa11.07□□□□□ -0.64
TRAF1-203ENST00000546084 ZNF446Q9NWS9 450 aa11.07□□□□□ -0.64
TRAF1-203ENST00000546084 ANKARQ7Z5J8 1434 aa11.07□□□□□ -0.64
TRAF1-203ENST00000546084 UBN2Q6ZU65 1347 aa11.07□□□□□ -0.64
TRAF1-203ENST00000546084 A0A1W2PQ27 194 aa11.07□□□□□ -0.64
TRAF1-203ENST00000546084 A0A1W2PQ64 194 aa11.07□□□□□ -0.64
TRAF1-203ENST00000546084 A0A1W2PQD8 194 aa11.07□□□□□ -0.64
TRAF1-203ENST00000546084 TEX33O43247 280 aa11.07□□□□□ -0.64
TRAF1-203ENST00000546084 TFRCP02786 760 aaKnown RBP11.07□□□□□ -0.64
TRAF1-203ENST00000546084 RPS8P62241 208 aaKnown RBP11.07□□□□□ -0.64
TRAF1-203ENST00000546084 TCERG1LQ5VWI1 586 aa11.07□□□□□ -0.64
TRAF1-203ENST00000546084 AK7Q96M32 723 aa11.07□□□□□ -0.64
TRAF1-203ENST00000546084 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.07□□□□□ -0.64
TRAF1-203ENST00000546084 EPB41L4AQ9HCS5 686 aaPredicted RBP11.07□□□□□ -0.64
TRAF1-203ENST00000546084 ARFGAP3Q9NP61 516 aa11.07□□□□□ -0.64
TRAF1-203ENST00000546084 ZNHIT6Q9NWK9 470 aaKnown RBP11.07□□□□□ -0.64
TRAF1-203ENST00000546084 TFR2Q9UP52 801 aa11.07□□□□□ -0.64
TRAF1-203ENST00000546084 WWC2Q6AWC2 1192 aa11.07□□□□□ -0.64
TRAF1-203ENST00000546084 RASGRP2Q7LDG7 609 aa11.07□□□□□ -0.64
TRAF1-203ENST00000546084 ILDR1Q86SU0 546 aaPredicted RBP11.07□□□□□ -0.64
TRAF1-203ENST00000546084 CRACR2BQ8N4Y2 399 aaPredicted RBP11.07□□□□□ -0.64
TRAF1-203ENST00000546084 ISCA1Q9BUE6 129 aa11.07□□□□□ -0.64
TRAF1-203ENST00000546084 BIN2Q9UBW5 565 aaPredicted RBP11.07□□□□□ -0.64
TRAF1-203ENST00000546084 C1orf167Q5SNV9 1468 aa11.06□□□□□ -0.64
TRAF1-203ENST00000546084 GSG1L2A8MUP6 293 aa11.06□□□□□ -0.64
TRAF1-203ENST00000546084 UBAP1LF5GYI3 381 aa11.06□□□□□ -0.64
TRAF1-203ENST00000546084 LDHBP07195 334 aaKnown RBP11.06□□□□□ -0.64
TRAF1-203ENST00000546084 CYP19A1P11511 503 aaPredicted RBP11.06□□□□□ -0.64
TRAF1-203ENST00000546084 CACNB1Q02641 598 aaPredicted RBP11.06□□□□□ -0.64
TRAF1-203ENST00000546084 STIM1Q13586 685 aa11.06□□□□□ -0.64
TRAF1-203ENST00000546084 RILPL1Q5EBL4 403 aa11.06□□□□□ -0.64
TRAF1-203ENST00000546084 LRRC47Q8N1G4 583 aaKnown RBP11.06□□□□□ -0.64
TRAF1-203ENST00000546084 PKD2L1Q9P0L9 805 aa11.06□□□□□ -0.64
TRAF1-203ENST00000546084 FAM196BA6NMK8 535 aa11.06□□□□□ -0.64
TRAF1-203ENST00000546084 CUTAO60888 179 aa11.06□□□□□ -0.64
TRAF1-203ENST00000546084 MYCNP04198 464 aaPredicted RBP11.06□□□□□ -0.64
TRAF1-203ENST00000546084 PLS1Q14651 629 aa11.06□□□□□ -0.64
TRAF1-203ENST00000546084 ZYXQ15942 572 aaKnown RBP11.06□□□□□ -0.64
TRAF1-203ENST00000546084 MSL1Q68DK7 614 aa11.06□□□□□ -0.64
TRAF1-203ENST00000546084 CCNL1Q9UK58 526 aaPredicted RBP11.06□□□□□ -0.64
TRAF1-203ENST00000546084 CCNT1O60563 726 aaKnown RBP11.06□□□□□ -0.64
TRAF1-203ENST00000546084 UFL1O94874 794 aa11.06□□□□□ -0.64
TRAF1-203ENST00000546084 KRT9P35527 623 aa11.06□□□□□ -0.64
TRAF1-203ENST00000546084 HNRNPH2P55795 449 aaKnown RBP11.06□□□□□ -0.64
TRAF1-203ENST00000546084 TPTE2Q6XPS3 522 aa11.06□□□□□ -0.64
TRAF1-203ENST00000546084 ACRBPQ8NEB7 543 aa11.06□□□□□ -0.64
TRAF1-203ENST00000546084 HPS3Q969F9 1004 aa11.06□□□□□ -0.64
TRAF1-203ENST00000546084 ZSCAN10Q96SZ4 725 aaPredicted RBP11.06□□□□□ -0.64
TRAF1-203ENST00000546084 LY9Q9HBG7 655 aa11.06□□□□□ -0.64
TRAF1-203ENST00000546084 POLR3EQ9NVU0 708 aa11.06□□□□□ -0.64
TRAF1-203ENST00000546084 OAS2P29728 719 aaKnown RBP11.05□□□□□ -0.64
TRAF1-203ENST00000546084 PPP2R3AQ06190 1150 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms