RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 SURF6O75683 361 aaKnown RBP20.38■□□□□ 0.85
CPSF7-225ENST00000545934 CYP7A1P22680 504 aa20.38■□□□□ 0.85
CPSF7-225ENST00000545934 MAP2K5Q13163 448 aa20.38■□□□□ 0.85
CPSF7-225ENST00000545934 LRRC26Q2I0M4 334 aa20.38■□□□□ 0.85
CPSF7-225ENST00000545934 LBX2Q6XYB7 198 aa20.38■□□□□ 0.85
CPSF7-225ENST00000545934 USP17L15C9J2P7 530 aa20.37■□□□□ 0.85
CPSF7-225ENST00000545934 USP17L13C9JLJ4 530 aa20.37■□□□□ 0.85
CPSF7-225ENST00000545934 USP17L11C9JVI0 530 aa20.37■□□□□ 0.85
CPSF7-225ENST00000545934 USP17L18D6R9N7 530 aa20.37■□□□□ 0.85
CPSF7-225ENST00000545934 USP17L22D6RA61 530 aa20.37■□□□□ 0.85
CPSF7-225ENST00000545934 USP17L17D6RBQ6 530 aa20.37■□□□□ 0.85
CPSF7-225ENST00000545934 USP17L19D6RCP7 530 aa20.37■□□□□ 0.85
CPSF7-225ENST00000545934 USP17L20D6RJB6 530 aa20.37■□□□□ 0.85
CPSF7-225ENST00000545934 USP17L24Q0WX57 530 aa20.37■□□□□ 0.85
CPSF7-225ENST00000545934 OS9Q13438 667 aaPredicted RBP20.37■□□□□ 0.85
CPSF7-225ENST00000545934 ZKSCAN2Q63HK3 967 aa20.37■□□□□ 0.85
CPSF7-225ENST00000545934 CATSPERGQ6ZRH7 1159 aa20.37■□□□□ 0.85
CPSF7-225ENST00000545934 CERS3Q8IU89 383 aa20.37■□□□□ 0.85
CPSF7-225ENST00000545934 DEFB123Q8N688 67 aa20.37■□□□□ 0.85
CPSF7-225ENST00000545934 EAF2Q96CJ1 260 aaPredicted RBP20.37■□□□□ 0.85
CPSF7-225ENST00000545934 KIAA1683Q9H0B3 1180 aa20.37■□□□□ 0.85
CPSF7-225ENST00000545934 FLRT1Q9NZU1 646 aa20.37■□□□□ 0.85
CPSF7-225ENST00000545934 SERPINB13Q9UIV8 391 aa20.37■□□□□ 0.85
CPSF7-225ENST00000545934 IGHA2P01877 340 aa20.36■□□□□ 0.85
CPSF7-225ENST00000545934 TMED8Q6PL24 325 aaPredicted RBP20.36■□□□□ 0.85
CPSF7-225ENST00000545934 Q7L0L9 218 aa20.36■□□□□ 0.85
CPSF7-225ENST00000545934 EDC3Q96F86 508 aaKnown RBP20.36■□□□□ 0.85
CPSF7-225ENST00000545934 UBE2OQ9C0C9 1292 aaKnown RBP20.36■□□□□ 0.85
CPSF7-225ENST00000545934 MTMR10Q9NXD2 777 aa20.36■□□□□ 0.85
CPSF7-225ENST00000545934 STXBP5LQ9Y2K9 1186 aa20.36■□□□□ 0.85
CPSF7-225ENST00000545934 COL11A1P12107 1806 aaPredicted RBP20.36■□□□□ 0.85
CPSF7-225ENST00000545934 HOXC6P09630 235 aa20.35■□□□□ 0.85
CPSF7-225ENST00000545934 PTPREP23469 700 aa20.35■□□□□ 0.85
CPSF7-225ENST00000545934 USP14P54578 494 aa20.35■□□□□ 0.85
CPSF7-225ENST00000545934 CCAR1Q8IX12 1150 aaKnown RBP20.35■□□□□ 0.85
CPSF7-225ENST00000545934 MIGA1Q8NAN2 632 aa20.35■□□□□ 0.85
CPSF7-225ENST00000545934 CCDC8Q9H0W5 538 aaPredicted RBP20.35■□□□□ 0.85
CPSF7-225ENST00000545934 C1orf115Q9H7X2 142 aa20.35■□□□□ 0.85
CPSF7-225ENST00000545934 MYH7P12883 1935 aa20.34■□□□□ 0.85
CPSF7-225ENST00000545934 BAZ2AQ9UIF9 1905 aaKnown RBP20.34■□□□□ 0.85
CPSF7-225ENST00000545934 SLC15A5A6NIM6 579 aa20.34■□□□□ 0.85
CPSF7-225ENST00000545934 IDH1O75874 414 aaKnown RBP20.34■□□□□ 0.85
CPSF7-225ENST00000545934 GLRX3O76003 335 aaKnown RBP20.34■□□□□ 0.85
CPSF7-225ENST00000545934 VCAM1P19320 739 aa20.34■□□□□ 0.85
CPSF7-225ENST00000545934 CCNA1P78396 465 aa20.34■□□□□ 0.85
CPSF7-225ENST00000545934 ZYXQ15942 572 aaKnown RBP20.34■□□□□ 0.85
CPSF7-225ENST00000545934 MAGEB6Q8N7X4 407 aa20.34■□□□□ 0.85
CPSF7-225ENST00000545934 ACER1Q8TDN7 264 aa20.34■□□□□ 0.85
CPSF7-225ENST00000545934 ANTXR1Q9H6X2 564 aa20.34■□□□□ 0.85
CPSF7-225ENST00000545934 BTBD7Q9P203 1132 aa20.34■□□□□ 0.85
CPSF7-225ENST00000545934 PLXNA1Q9UIW2 1896 aa20.34■□□□□ 0.85
CPSF7-225ENST00000545934 GUCY1A2P33402 732 aa20.33■□□□□ 0.85
CPSF7-225ENST00000545934 SHMT1P34896 483 aa20.33■□□□□ 0.85
CPSF7-225ENST00000545934 USP5P45974 858 aa20.33■□□□□ 0.85
CPSF7-225ENST00000545934 GRB14Q14449 540 aa20.33■□□□□ 0.85
CPSF7-225ENST00000545934 ABCB5Q2M3G0 1257 aa20.33■□□□□ 0.85
CPSF7-225ENST00000545934 CERKLQ49MI3 558 aaPredicted RBP20.33■□□□□ 0.85
CPSF7-225ENST00000545934 TTC6Q86TZ1 520 aa20.33■□□□□ 0.85
CPSF7-225ENST00000545934 FEZ1Q99689 392 aa20.33■□□□□ 0.85
CPSF7-225ENST00000545934 RIOK1Q9BRS2 568 aaKnown RBP20.33■□□□□ 0.85
CPSF7-225ENST00000545934 NDUFB9Q9Y6M9 179 aa20.33■□□□□ 0.85
CPSF7-225ENST00000545934 SPDYE16A6NNV3 312 aaPredicted RBP20.32■□□□□ 0.84
CPSF7-225ENST00000545934 PLCD1P51178 756 aa20.32■□□□□ 0.84
CPSF7-225ENST00000545934 RAB3GAP1Q15042 981 aa20.32■□□□□ 0.84
CPSF7-225ENST00000545934 DDX20Q9UHI6 824 aaKnown RBP20.32■□□□□ 0.84
CPSF7-225ENST00000545934 UNC80Q8N2C7 3258 aa20.31■□□□□ 0.84
CPSF7-225ENST00000545934 LAMA2P24043 3122 aaKnown RBP20.31■□□□□ 0.84
CPSF7-225ENST00000545934 GABPAQ06546 454 aa20.31■□□□□ 0.84
CPSF7-225ENST00000545934 MFSD14CQ5VZR4 134 aa20.31■□□□□ 0.84
CPSF7-225ENST00000545934 NPLOC4Q8TAT6 608 aa20.31■□□□□ 0.84
CPSF7-225ENST00000545934 LPAR1Q92633 364 aa20.31■□□□□ 0.84
CPSF7-225ENST00000545934 A0A0C4DFX4 3053 aa20.31■□□□□ 0.84
CPSF7-225ENST00000545934 MSCO60682 206 aa20.3■□□□□ 0.84
CPSF7-225ENST00000545934 MDM2Q00987 491 aaPredicted RBP20.3■□□□□ 0.84
CPSF7-225ENST00000545934 MAP3K12Q12852 859 aa20.3■□□□□ 0.84
CPSF7-225ENST00000545934 TRPV1Q8NER1 839 aa20.3■□□□□ 0.84
CPSF7-225ENST00000545934 RPAP3Q9H6T3 665 aaPredicted RBP20.3■□□□□ 0.84
CPSF7-225ENST00000545934 CWC22Q9HCG8 908 aaKnown RBP20.3■□□□□ 0.84
CPSF7-225ENST00000545934 SMCHD1A6NHR9 2005 aa20.29■□□□□ 0.84
CPSF7-225ENST00000545934 POTEB2H3BUK9 544 aa20.29■□□□□ 0.84
CPSF7-225ENST00000545934 RLBP1P12271 317 aa20.29■□□□□ 0.84
CPSF7-225ENST00000545934 SENP6Q9GZR1 1112 aaPredicted RBP20.29■□□□□ 0.84
CPSF7-225ENST00000545934 CABP5Q9NP86 173 aa20.29■□□□□ 0.84
CPSF7-225ENST00000545934 A0A1W2PRG0 241 aa20.28■□□□□ 0.84
CPSF7-225ENST00000545934 DNM1LO00429 736 aa20.28■□□□□ 0.84
CPSF7-225ENST00000545934 CYBAP13498 195 aa20.28■□□□□ 0.84
CPSF7-225ENST00000545934 ATP2B2Q01814 1243 aa20.28■□□□□ 0.84
CPSF7-225ENST00000545934 FAM109BQ6ICB4 259 aaPredicted RBP20.28■□□□□ 0.84
CPSF7-225ENST00000545934 CEP85Q6P2H3 762 aa20.28■□□□□ 0.84
CPSF7-225ENST00000545934 CYP2C19P33261 490 aa20.27■□□□□ 0.84
CPSF7-225ENST00000545934 EVX2Q03828 476 aa20.27■□□□□ 0.84
CPSF7-225ENST00000545934 SEPT2Q15019 361 aa20.27■□□□□ 0.84
CPSF7-225ENST00000545934 WDR78Q5VTH9 848 aa20.27■□□□□ 0.84
CPSF7-225ENST00000545934 IVNS1ABPQ9Y6Y0 642 aa20.27■□□□□ 0.84
CPSF7-225ENST00000545934 COG2Q14746 738 aa20.26■□□□□ 0.83
CPSF7-225ENST00000545934 OLFML2BQ68BL8 750 aa20.26■□□□□ 0.83
CPSF7-225ENST00000545934 MOV10L1Q9BXT6 1211 aaKnown RBP20.26■□□□□ 0.83
CPSF7-225ENST00000545934 GREB1LQ9C091 1923 aaPredicted RBP20.25■□□□□ 0.83
CPSF7-225ENST00000545934 MAGEB6P1A0A0J9YX57 407 aa20.25■□□□□ 0.83
CPSF7-225ENST00000545934 STRNO43815 780 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms