RNA–Protein interactions for RNA: ENST00000545882.5

CNN3-207, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,902 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-207ENST00000545882 CCDC87Q9NVE4 849 aa17.45■□□□□ 0.38
CNN3-207ENST00000545882 RAI14Q9P0K7 980 aa17.45■□□□□ 0.38
CNN3-207ENST00000545882 VPS54Q9P1Q0 977 aa17.45■□□□□ 0.38
CNN3-207ENST00000545882 CEP131Q9UPN4 1083 aa17.45■□□□□ 0.38
CNN3-207ENST00000545882 IQSEC3Q9UPP2 1182 aaPredicted RBP17.45■□□□□ 0.38
CNN3-207ENST00000545882 COL1A1P02452 1464 aaPredicted RBP17.45■□□□□ 0.38
CNN3-207ENST00000545882 COL5A3P25940 1745 aaPredicted RBP17.44■□□□□ 0.38
CNN3-207ENST00000545882 CAMTA2O94983 1202 aa17.44■□□□□ 0.38
CNN3-207ENST00000545882 CD44P16070 742 aaKnown RBP17.44■□□□□ 0.38
CNN3-207ENST00000545882 BMS1Q14692 1282 aaKnown RBP17.44■□□□□ 0.38
CNN3-207ENST00000545882 DDB1Q16531 1140 aa17.44■□□□□ 0.38
CNN3-207ENST00000545882 NUTM2AQ8IVF1 878 aaPredicted RBP17.44■□□□□ 0.38
CNN3-207ENST00000545882 FAM177A1Q8N128 213 aaPredicted RBP17.44■□□□□ 0.38
CNN3-207ENST00000545882 UBXN4Q92575 508 aa17.44■□□□□ 0.38
CNN3-207ENST00000545882 UBAC1Q9BSL1 405 aa17.44■□□□□ 0.38
CNN3-207ENST00000545882 PHF20Q9BVI0 1012 aa17.44■□□□□ 0.38
CNN3-207ENST00000545882 TEX33O43247 280 aa17.43■□□□□ 0.38
CNN3-207ENST00000545882 PRDM1O75626 825 aa17.43■□□□□ 0.38
CNN3-207ENST00000545882 NTSR2O95665 410 aa17.43■□□□□ 0.38
CNN3-207ENST00000545882 CRKLP46109 303 aaKnown RBP17.43■□□□□ 0.38
CNN3-207ENST00000545882 MAP3K9P80192 1104 aa17.43■□□□□ 0.38
CNN3-207ENST00000545882 CCDC152Q4G0S7 254 aa17.43■□□□□ 0.38
CNN3-207ENST00000545882 ZNF771Q7L3S4 317 aaPredicted RBP17.43■□□□□ 0.38
CNN3-207ENST00000545882 ENAHQ8N8S7 591 aaPredicted RBP17.43■□□□□ 0.38
CNN3-207ENST00000545882 KIFC2Q96AC6 838 aa17.43■□□□□ 0.38
CNN3-207ENST00000545882 DHX58Q96C10 678 aa17.43■□□□□ 0.38
CNN3-207ENST00000545882 RIOK1Q9BRS2 568 aaKnown RBP17.43■□□□□ 0.38
CNN3-207ENST00000545882 NOL10Q9BSC4 688 aaKnown RBP17.43■□□□□ 0.38
CNN3-207ENST00000545882 SCN7AQ01118 1682 aa17.43■□□□□ 0.38
CNN3-207ENST00000545882 ZNF831Q5JPB2 1677 aa17.43■□□□□ 0.38
CNN3-207ENST00000545882 hCG_1642624A0A1W2PR95 340 aa17.43■□□□□ 0.38
CNN3-207ENST00000545882 WTIPA6NIX2 430 aaPredicted RBP17.43■□□□□ 0.38
CNN3-207ENST00000545882 CASP1P29466 404 aa17.43■□□□□ 0.38
CNN3-207ENST00000545882 IGHMBP2P38935 993 aaKnown RBP17.43■□□□□ 0.38
CNN3-207ENST00000545882 CUL4BQ13620 913 aa17.43■□□□□ 0.38
CNN3-207ENST00000545882 NOM1Q5C9Z4 860 aaKnown RBP17.43■□□□□ 0.38
CNN3-207ENST00000545882 MARCH10Q8NA82 808 aaPredicted RBP17.43■□□□□ 0.38
CNN3-207ENST00000545882 ZNF804BA4D1E1 1349 aa17.43■□□□□ 0.38
CNN3-207ENST00000545882 CYP2D7A0A087X1C5 515 aa17.42■□□□□ 0.38
CNN3-207ENST00000545882 MAGEB6P1A0A0J9YX57 407 aa17.42■□□□□ 0.38
CNN3-207ENST00000545882 TRIM75PA6NK02 468 aa17.42■□□□□ 0.38
CNN3-207ENST00000545882 EFCAB8A8MWE9 144 aa17.42■□□□□ 0.38
CNN3-207ENST00000545882 PRPF3O43395 683 aaKnown RBP17.42■□□□□ 0.38
CNN3-207ENST00000545882 PLEKHA8P1O95397 391 aa17.42■□□□□ 0.38
CNN3-207ENST00000545882 PNMA6AP0CW24 399 aaPredicted RBP17.42■□□□□ 0.38
CNN3-207ENST00000545882 PLA2G4AP47712 749 aa17.42■□□□□ 0.38
CNN3-207ENST00000545882 MTF1Q14872 753 aa17.42■□□□□ 0.38
CNN3-207ENST00000545882 NPY5RQ15761 445 aa17.42■□□□□ 0.38
CNN3-207ENST00000545882 MNS1Q8NEH6 495 aa17.42■□□□□ 0.38
CNN3-207ENST00000545882 ESR2Q92731 530 aa17.42■□□□□ 0.38
CNN3-207ENST00000545882 TNFRSF25Q93038 417 aa17.42■□□□□ 0.38
CNN3-207ENST00000545882 PAGE5Q96GU1 130 aa17.42■□□□□ 0.38
CNN3-207ENST00000545882 ZSCAN10Q96SZ4 725 aaPredicted RBP17.42■□□□□ 0.38
CNN3-207ENST00000545882 BAZ2BQ9UIF8 2168 aaKnown RBP17.41■□□□□ 0.38
CNN3-207ENST00000545882 LOC102724428A0A0B4J2F2 783 aa17.41■□□□□ 0.38
CNN3-207ENST00000545882 GOLGA6L9A6NEM1 432 aa17.41■□□□□ 0.38
CNN3-207ENST00000545882 CASQ1P31415 396 aa17.41■□□□□ 0.38
CNN3-207ENST00000545882 KRT2P35908 639 aa17.41■□□□□ 0.38
CNN3-207ENST00000545882 PBX1P40424 430 aa17.41■□□□□ 0.38
CNN3-207ENST00000545882 AFMP43652 599 aa17.41■□□□□ 0.38
CNN3-207ENST00000545882 SIK1P57059 783 aa17.41■□□□□ 0.38
CNN3-207ENST00000545882 GNG11P61952 73 aa17.41■□□□□ 0.38
CNN3-207ENST00000545882 DYNLL1P63167 89 aaKnown RBP17.41■□□□□ 0.38
CNN3-207ENST00000545882 ITPK1Q13572 414 aa17.41■□□□□ 0.38
CNN3-207ENST00000545882 PPP2R5BQ15173 497 aa17.41■□□□□ 0.38
CNN3-207ENST00000545882 SYMPKQ92797 1274 aaKnown RBP17.41■□□□□ 0.38
CNN3-207ENST00000545882 DESI2Q9BSY9 194 aa17.41■□□□□ 0.38
CNN3-207ENST00000545882 EPC1Q9H2F5 836 aa17.41■□□□□ 0.38
CNN3-207ENST00000545882 MRPL44Q9H9J2 332 aaKnown RBP17.41■□□□□ 0.38
CNN3-207ENST00000545882 MRFAP1Q9Y605 127 aa17.41■□□□□ 0.38
CNN3-207ENST00000545882 ATP6V1AP38606 617 aa17.41■□□□□ 0.38
CNN3-207ENST00000545882 DPYDQ12882 1025 aa17.41■□□□□ 0.38
CNN3-207ENST00000545882 PARP10Q53GL7 1025 aa17.41■□□□□ 0.38
CNN3-207ENST00000545882 SPATA1Q5VX52 437 aa17.41■□□□□ 0.38
CNN3-207ENST00000545882 ZNF384Q8TF68 577 aa17.41■□□□□ 0.38
CNN3-207ENST00000545882 V9GY48 417 aaPredicted RBP17.41■□□□□ 0.38
CNN3-207ENST00000545882 SPATA31A5Q5VU36 1347 aa17.41■□□□□ 0.38
CNN3-207ENST00000545882 SPATA31A7Q8IWB4 1347 aa17.41■□□□□ 0.38
CNN3-207ENST00000545882 PPP1R3GB7ZBB8 358 aa17.4■□□□□ 0.38
CNN3-207ENST00000545882 GYG1P46976 350 aa17.4■□□□□ 0.38
CNN3-207ENST00000545882 CT47A1Q5JQC4 288 aaPredicted RBP17.4■□□□□ 0.38
CNN3-207ENST00000545882 CDKAL1Q5VV42 579 aa17.4■□□□□ 0.38
CNN3-207ENST00000545882 ABCF2Q9UG63 623 aa17.4■□□□□ 0.38
CNN3-207ENST00000545882 LAMB1P07942 1786 aa17.4■□□□□ 0.38
CNN3-207ENST00000545882 ADAMTS2O95450 1211 aa17.39■□□□□ 0.37
CNN3-207ENST00000545882 FGRP09769 529 aa17.39■□□□□ 0.37
CNN3-207ENST00000545882 STX17P56962 302 aa17.39■□□□□ 0.37
CNN3-207ENST00000545882 TROAPQ12815 778 aa17.39■□□□□ 0.37
CNN3-207ENST00000545882 RSRC2Q7L4I2 434 aaKnown RBP17.39■□□□□ 0.37
CNN3-207ENST00000545882 PANX2Q96RD6 677 aa17.39■□□□□ 0.37
CNN3-207ENST00000545882 ADD3Q9UEY8 706 aaKnown RBP17.39■□□□□ 0.37
CNN3-207ENST00000545882 SOWAHDA6NJG2 315 aa17.39■□□□□ 0.37
CNN3-207ENST00000545882 AKR1B15C9JRZ8 316 aaPredicted RBP17.39■□□□□ 0.37
CNN3-207ENST00000545882 AKAP17AQ02040 695 aaKnown RBP17.39■□□□□ 0.37
CNN3-207ENST00000545882 RBL2Q08999 1139 aa17.39■□□□□ 0.37
CNN3-207ENST00000545882 KARSQ15046 597 aaKnown RBP17.39■□□□□ 0.37
CNN3-207ENST00000545882 RAD9BQ6WBX8 426 aa17.39■□□□□ 0.37
CNN3-207ENST00000545882 BARGINQ6ZT62 677 aa17.39■□□□□ 0.37
CNN3-207ENST00000545882 SMYD4Q8IYR2 804 aaPredicted RBP17.39■□□□□ 0.37
CNN3-207ENST00000545882 ACSBG1Q96GR2 724 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms