RNA–Protein interactions for RNA: ENST00000545720.6

RAP1B-233, Transcript of RAP1B, member of RAS oncogene family, human

TSL 5

Gene RAP1B, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-233	ENST00000545720	POLR3D	P05423	398 aa	Predicted RBP	28.84	■■■□□ 2.21
RAP1B-233	ENST00000545720	IFIT2	P09913	472 aa	Known RBP	28.84	■■■□□ 2.21
RAP1B-233	ENST00000545720	MAPK4	P31152	587 aa		28.84	■■■□□ 2.21
RAP1B-233	ENST00000545720	PDE3A	Q14432	1141 aa		28.84	■■■□□ 2.21
RAP1B-233	ENST00000545720		Q3C1V9	767 aa		28.84	■■■□□ 2.21
RAP1B-233	ENST00000545720	POTEE	Q6S8J3	1075 aa		28.84	■■■□□ 2.21
RAP1B-233	ENST00000545720	RPAP2	Q8IXW5	612 aa	Predicted RBP	28.84	■■■□□ 2.21
RAP1B-233	ENST00000545720	C12orf42	Q96LP6	360 aa		28.84	■■■□□ 2.21
RAP1B-233	ENST00000545720	DDX19B	Q9UMR2	479 aa		28.84	■■■□□ 2.21
RAP1B-233	ENST00000545720	SHMT1	P34896	483 aa		28.83	■■■□□ 2.21
RAP1B-233	ENST00000545720	SIRT2	Q8IXJ6	389 aa		28.83	■■■□□ 2.21
RAP1B-233	ENST00000545720	CRNKL1	Q9BZJ0	848 aa	Known RBP	28.83	■■■□□ 2.21
RAP1B-233	ENST00000545720	NECAB2	Q7Z6G3	386 aa		28.82	■■■□□ 2.2
RAP1B-233	ENST00000545720	ACER1	Q8TDN7	264 aa		28.82	■■■□□ 2.2
RAP1B-233	ENST00000545720	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	28.82	■■■□□ 2.2
RAP1B-233	ENST00000545720	KIAA1683	Q9H0B3	1180 aa		28.82	■■■□□ 2.2
RAP1B-233	ENST00000545720	CABP5	Q9NP86	173 aa		28.82	■■■□□ 2.2
RAP1B-233	ENST00000545720	ZBTB40	Q9NUA8	1239 aa		28.82	■■■□□ 2.2
RAP1B-233	ENST00000545720	ZNF532	Q9HCE3	1301 aa		28.82	■■■□□ 2.2
RAP1B-233	ENST00000545720	USP17L15	C9J2P7	530 aa		28.81	■■■□□ 2.2
RAP1B-233	ENST00000545720	USP17L13	C9JLJ4	530 aa		28.81	■■■□□ 2.2
RAP1B-233	ENST00000545720	USP17L11	C9JVI0	530 aa		28.81	■■■□□ 2.2
RAP1B-233	ENST00000545720	USP17L18	D6R9N7	530 aa		28.81	■■■□□ 2.2
RAP1B-233	ENST00000545720	USP17L22	D6RA61	530 aa		28.81	■■■□□ 2.2
RAP1B-233	ENST00000545720	USP17L17	D6RBQ6	530 aa		28.81	■■■□□ 2.2
RAP1B-233	ENST00000545720	USP17L19	D6RCP7	530 aa		28.81	■■■□□ 2.2
RAP1B-233	ENST00000545720	USP17L20	D6RJB6	530 aa		28.81	■■■□□ 2.2
RAP1B-233	ENST00000545720	XRCC5	P13010	732 aa	Known RBP	28.81	■■■□□ 2.2
RAP1B-233	ENST00000545720	PRKAR2A	P13861	404 aa	Known RBP	28.81	■■■□□ 2.2
RAP1B-233	ENST00000545720	USP14	P54578	494 aa		28.81	■■■□□ 2.2
RAP1B-233	ENST00000545720	USP17L24	Q0WX57	530 aa		28.81	■■■□□ 2.2
RAP1B-233	ENST00000545720	GPR142	Q7Z601	462 aa		28.81	■■■□□ 2.2
RAP1B-233	ENST00000545720	EDC3	Q96F86	508 aa	Known RBP	28.81	■■■□□ 2.2
RAP1B-233	ENST00000545720	MCM9	Q9NXL9	1143 aa		28.81	■■■□□ 2.2
RAP1B-233	ENST00000545720	VCAM1	P19320	739 aa		28.8	■■■□□ 2.2
RAP1B-233	ENST00000545720	EVX2	Q03828	476 aa		28.8	■■■□□ 2.2
RAP1B-233	ENST00000545720	ANKLE1	Q8NAG6	615 aa		28.8	■■■□□ 2.2
RAP1B-233	ENST00000545720	SDR42E1	Q8WUS8	393 aa		28.8	■■■□□ 2.2
RAP1B-233	ENST00000545720	CWC22	Q9HCG8	908 aa	Known RBP	28.8	■■■□□ 2.2
RAP1B-233	ENST00000545720	SZT2	Q5T011	3432 aa		28.8	■■■□□ 2.2
RAP1B-233	ENST00000545720	TCRBV5S4A2T	A0A5A2	114 aa		28.79	■■■□□ 2.2
RAP1B-233	ENST00000545720	ZKSCAN1	P17029	563 aa	Predicted RBP	28.79	■■■□□ 2.2
RAP1B-233	ENST00000545720	MAP3K21	Q5TCX8	1036 aa		28.79	■■■□□ 2.2
RAP1B-233	ENST00000545720	PLEKHH3	Q7Z736	793 aa		28.79	■■■□□ 2.2
RAP1B-233	ENST00000545720	LCORL	Q8N3X6	602 aa		28.79	■■■□□ 2.2
RAP1B-233	ENST00000545720	RABGAP1	Q9Y3P9	1069 aa		28.79	■■■□□ 2.2
RAP1B-233	ENST00000545720	RAB11FIP3	O75154	756 aa		28.78	■■■□□ 2.2
RAP1B-233	ENST00000545720	GUCY1A2	P33402	732 aa		28.78	■■■□□ 2.2
RAP1B-233	ENST00000545720	RGS2	P41220	211 aa		28.78	■■■□□ 2.2
RAP1B-233	ENST00000545720	GABPA	Q06546	454 aa		28.78	■■■□□ 2.2
RAP1B-233	ENST00000545720	MORN1	Q5T089	497 aa		28.78	■■■□□ 2.2
RAP1B-233	ENST00000545720	CATSPERG	Q6ZRH7	1159 aa		28.78	■■■□□ 2.2
RAP1B-233	ENST00000545720	USP6NL	Q92738	828 aa		28.78	■■■□□ 2.2
RAP1B-233	ENST00000545720	PRO3102	Q9H379	93 aa		28.78	■■■□□ 2.2
RAP1B-233	ENST00000545720	RLF	Q13129	1914 aa		28.78	■■■□□ 2.2
RAP1B-233	ENST00000545720	CNMD	O75829	334 aa		28.77	■■■□□ 2.2
RAP1B-233	ENST00000545720	SEPT2	Q15019	361 aa		28.77	■■■□□ 2.2
RAP1B-233	ENST00000545720	CCL14	Q16627	93 aa		28.77	■■■□□ 2.2
RAP1B-233	ENST00000545720	TRMT44	Q8IYL2	757 aa	Known RBP	28.77	■■■□□ 2.2
RAP1B-233	ENST00000545720	APBA2	Q99767	749 aa		28.77	■■■□□ 2.2
RAP1B-233	ENST00000545720	PARP14	Q460N5	1801 aa		28.76	■■■□□ 2.19
RAP1B-233	ENST00000545720	MPHOSPH10	O00566	681 aa	Known RBP	28.76	■■■□□ 2.19
RAP1B-233	ENST00000545720	CCNA1	P78396	465 aa		28.76	■■■□□ 2.19
RAP1B-233	ENST00000545720	WDR78	Q5VTH9	848 aa		28.76	■■■□□ 2.19
RAP1B-233	ENST00000545720	NBPF3	Q9H094	633 aa		28.76	■■■□□ 2.19
RAP1B-233	ENST00000545720	BOLA2	Q9H3K6	86 aa		28.76	■■■□□ 2.19
RAP1B-233	ENST00000545720	RPAP3	Q9H6T3	665 aa	Predicted RBP	28.76	■■■□□ 2.19
RAP1B-233	ENST00000545720	DCP1A	Q9NPI6	582 aa	Predicted RBP	28.76	■■■□□ 2.19
RAP1B-233	ENST00000545720	PAG1	Q9NWQ8	432 aa		28.76	■■■□□ 2.19
RAP1B-233	ENST00000545720	CYP2D6	P10635	497 aa		28.75	■■■□□ 2.19
RAP1B-233	ENST00000545720	MNX1	P50219	401 aa	Predicted RBP	28.75	■■■□□ 2.19
RAP1B-233	ENST00000545720	CACNB2	Q08289	660 aa	Predicted RBP	28.75	■■■□□ 2.19
RAP1B-233	ENST00000545720	ARMT1	Q9H993	441 aa		28.75	■■■□□ 2.19
RAP1B-233	ENST00000545720	RCAN3	Q9UKA8	241 aa		28.75	■■■□□ 2.19
RAP1B-233	ENST00000545720	OGDHL	Q9ULD0	1010 aa		28.75	■■■□□ 2.19
RAP1B-233	ENST00000545720		A0A0G2JMZ2	1700 aa		28.74	■■■□□ 2.19
RAP1B-233	ENST00000545720	SLFNL1	Q499Z3	407 aa		28.74	■■■□□ 2.19
RAP1B-233	ENST00000545720	C7orf61	Q8IZ16	206 aa		28.74	■■■□□ 2.19
RAP1B-233	ENST00000545720	SLC44A5	Q8NCS7	719 aa		28.74	■■■□□ 2.19
RAP1B-233	ENST00000545720	MAP2K5	Q13163	448 aa		28.73	■■■□□ 2.19
RAP1B-233	ENST00000545720	CHMP4B	Q9H444	224 aa	Known RBP	28.73	■■■□□ 2.19
RAP1B-233	ENST00000545720	C11orf49	Q9H6J7	331 aa		28.73	■■■□□ 2.19
RAP1B-233	ENST00000545720	BTBD7	Q9P203	1132 aa		28.73	■■■□□ 2.19
RAP1B-233	ENST00000545720	SPDYE16	A6NNV3	312 aa	Predicted RBP	28.72	■■■□□ 2.19
RAP1B-233	ENST00000545720	GLRX3	O76003	335 aa	Known RBP	28.72	■■■□□ 2.19
RAP1B-233	ENST00000545720	MBD4	O95243	580 aa		28.72	■■■□□ 2.19
RAP1B-233	ENST00000545720	CCND3	P30281	292 aa	Predicted RBP	28.72	■■■□□ 2.19
RAP1B-233	ENST00000545720	ADD2	P35612	726 aa		28.72	■■■□□ 2.19
RAP1B-233	ENST00000545720	LBX2	Q6XYB7	198 aa		28.72	■■■□□ 2.19
RAP1B-233	ENST00000545720	COL11A1	P12107	1806 aa	Predicted RBP	28.71	■■■□□ 2.19
RAP1B-233	ENST00000545720		A0A1W2PRG0	241 aa		28.71	■■■□□ 2.19
RAP1B-233	ENST00000545720	PRKAB2	O43741	272 aa		28.71	■■■□□ 2.19
RAP1B-233	ENST00000545720	ATP5J	P18859	108 aa		28.71	■■■□□ 2.19
RAP1B-233	ENST00000545720	DYNLL2	Q96FJ2	89 aa		28.71	■■■□□ 2.19
RAP1B-233	ENST00000545720	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	28.71	■■■□□ 2.19
RAP1B-233	ENST00000545720	STAP2	Q9UGK3	403 aa		28.71	■■■□□ 2.19
RAP1B-233	ENST00000545720	HAUS7	Q99871	368 aa		28.7	■■■□□ 2.18
RAP1B-233	ENST00000545720	IVNS1ABP	Q9Y6Y0	642 aa		28.7	■■■□□ 2.18
RAP1B-233	ENST00000545720	ZNF236	Q9UL36	1845 aa		28.7	■■■□□ 2.18
RAP1B-233	ENST00000545720	ZNFX1	Q9P2E3	1918 aa	Known RBP	28.7	■■■□□ 2.18

Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms