RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 ATG9AQ7Z3C6 839 aa19.21■□□□□ 0.67
CLSTN3-216ENST00000545663 WWC1Q8IX03 1113 aa19.21■□□□□ 0.67
CLSTN3-216ENST00000545663 TMEM39AQ9NV64 488 aa19.21■□□□□ 0.67
CLSTN3-216ENST00000545663 RABGAP1Q9Y3P9 1069 aa19.21■□□□□ 0.67
CLSTN3-216ENST00000545663 MROH7-TTC4A0A0A0MT08 1334 aa19.21■□□□□ 0.67
CLSTN3-216ENST00000545663 FANCIQ9NVI1 1328 aa19.21■□□□□ 0.67
CLSTN3-216ENST00000545663 PLXNA1Q9UIW2 1896 aa19.2■□□□□ 0.66
CLSTN3-216ENST00000545663 C19orf81C9J6K1 198 aa19.2■□□□□ 0.66
CLSTN3-216ENST00000545663 EXOSC9Q06265 439 aaKnown RBP19.2■□□□□ 0.66
CLSTN3-216ENST00000545663 GRB14Q14449 540 aa19.2■□□□□ 0.66
CLSTN3-216ENST00000545663 FAM47AQ5JRC9 791 aa19.2■□□□□ 0.66
CLSTN3-216ENST00000545663 MICALL1Q8N3F8 863 aa19.2■□□□□ 0.66
CLSTN3-216ENST00000545663 SEPT4O43236 478 aa19.19■□□□□ 0.66
CLSTN3-216ENST00000545663 NPM3O75607 178 aaKnown RBP19.19■□□□□ 0.66
CLSTN3-216ENST00000545663 ADORA1P30542 326 aa19.19■□□□□ 0.66
CLSTN3-216ENST00000545663 RFX5P48382 616 aaPredicted RBP19.19■□□□□ 0.66
CLSTN3-216ENST00000545663 MECOMQ03112 1051 aa19.19■□□□□ 0.66
CLSTN3-216ENST00000545663 ATP2B3Q16720 1220 aa19.19■□□□□ 0.66
CLSTN3-216ENST00000545663 BTBD7Q9P203 1132 aa19.19■□□□□ 0.66
CLSTN3-216ENST00000545663 GDF11O95390 407 aa19.18■□□□□ 0.66
CLSTN3-216ENST00000545663 CCNA1P78396 465 aa19.18■□□□□ 0.66
CLSTN3-216ENST00000545663 FAAP100Q0VG06 881 aa19.18■□□□□ 0.66
CLSTN3-216ENST00000545663 GTF3C2Q8WUA4 911 aaPredicted RBP19.18■□□□□ 0.66
CLSTN3-216ENST00000545663 PHF24Q9UPV7 400 aa19.18■□□□□ 0.66
CLSTN3-216ENST00000545663 IVNS1ABPQ9Y6Y0 642 aa19.18■□□□□ 0.66
CLSTN3-216ENST00000545663 CACNA1FO60840 1977 aa19.17■□□□□ 0.66
CLSTN3-216ENST00000545663 SEMA3EO15041 775 aa19.17■□□□□ 0.66
CLSTN3-216ENST00000545663 ASNSP08243 561 aa19.17■□□□□ 0.66
CLSTN3-216ENST00000545663 MRE11P49959 708 aa19.17■□□□□ 0.66
CLSTN3-216ENST00000545663 RASGRF1Q13972 1273 aa19.17■□□□□ 0.66
CLSTN3-216ENST00000545663 TMEM240Q5SV17 173 aa19.17■□□□□ 0.66
CLSTN3-216ENST00000545663 RASIP1Q5U651 963 aa19.17■□□□□ 0.66
CLSTN3-216ENST00000545663 SLF2Q8IX21 1173 aa19.17■□□□□ 0.66
CLSTN3-216ENST00000545663 TSPYL2Q9H2G4 693 aaPredicted RBP19.17■□□□□ 0.66
CLSTN3-216ENST00000545663 NKX2-4Q9H2Z4 354 aa19.17■□□□□ 0.66
CLSTN3-216ENST00000545663 DNAJC18Q9H819 358 aa19.17■□□□□ 0.66
CLSTN3-216ENST00000545663 HERC5Q9UII4 1024 aaKnown RBP19.17■□□□□ 0.66
CLSTN3-216ENST00000545663 GPR37L1O60883 481 aa19.16■□□□□ 0.66
CLSTN3-216ENST00000545663 ZYXQ15942 572 aaKnown RBP19.16■□□□□ 0.66
CLSTN3-216ENST00000545663 DPP9Q86TI2 863 aa19.16■□□□□ 0.66
CLSTN3-216ENST00000545663 ZGPATQ8N5A5 531 aaKnown RBP19.16■□□□□ 0.66
CLSTN3-216ENST00000545663 SLC44A5Q8NCS7 719 aa19.16■□□□□ 0.66
CLSTN3-216ENST00000545663 SIL1Q9H173 461 aa19.16■□□□□ 0.66
CLSTN3-216ENST00000545663 COBLO75128 1261 aa19.15■□□□□ 0.66
CLSTN3-216ENST00000545663 ACRP10323 421 aa19.15■□□□□ 0.66
CLSTN3-216ENST00000545663 ADORA2AP29274 412 aa19.15■□□□□ 0.66
CLSTN3-216ENST00000545663 OLFML2BQ68BL8 750 aa19.15■□□□□ 0.66
CLSTN3-216ENST00000545663 CCDC102BQ68D86 513 aa19.15■□□□□ 0.66
CLSTN3-216ENST00000545663 USP17L2Q6R6M4 530 aa19.15■□□□□ 0.66
CLSTN3-216ENST00000545663 YBX2Q9Y2T7 364 aaKnown RBP19.15■□□□□ 0.66
CLSTN3-216ENST00000545663 PGK1P00558 417 aa19.14■□□□□ 0.65
CLSTN3-216ENST00000545663 TIMP1P01033 207 aa19.14■□□□□ 0.65
CLSTN3-216ENST00000545663 SKIV2LQ15477 1246 aaKnown RBP19.14■□□□□ 0.65
CLSTN3-216ENST00000545663 PI4KBQ9UBF8 816 aa19.14■□□□□ 0.65
CLSTN3-216ENST00000545663 ZBTB21Q9ULJ3 1066 aa19.14■□□□□ 0.65
CLSTN3-216ENST00000545663 A0A1W2PQ45 241 aaPredicted RBP19.13■□□□□ 0.65
CLSTN3-216ENST00000545663 A0A1W2PQY0 241 aa19.13■□□□□ 0.65
CLSTN3-216ENST00000545663 USP17L15C9J2P7 530 aa19.13■□□□□ 0.65
CLSTN3-216ENST00000545663 USP17L13C9JLJ4 530 aa19.13■□□□□ 0.65
CLSTN3-216ENST00000545663 USP17L11C9JVI0 530 aa19.13■□□□□ 0.65
CLSTN3-216ENST00000545663 USP17L18D6R9N7 530 aa19.13■□□□□ 0.65
CLSTN3-216ENST00000545663 USP17L22D6RA61 530 aa19.13■□□□□ 0.65
CLSTN3-216ENST00000545663 USP17L17D6RBQ6 530 aa19.13■□□□□ 0.65
CLSTN3-216ENST00000545663 USP17L19D6RCP7 530 aa19.13■□□□□ 0.65
CLSTN3-216ENST00000545663 USP17L20D6RJB6 530 aa19.13■□□□□ 0.65
CLSTN3-216ENST00000545663 USP17L24Q0WX57 530 aa19.13■□□□□ 0.65
CLSTN3-216ENST00000545663 CCDC27Q2M243 656 aa19.13■□□□□ 0.65
CLSTN3-216ENST00000545663 AAK1Q2M2I8 961 aa19.13■□□□□ 0.65
CLSTN3-216ENST00000545663 ZNF365Q70YC5 407 aa19.13■□□□□ 0.65
CLSTN3-216ENST00000545663 XPNPEP3Q9NQH7 507 aa19.13■□□□□ 0.65
CLSTN3-216ENST00000545663 MSRAQ9UJ68 235 aa19.13■□□□□ 0.65
CLSTN3-216ENST00000545663 IL16Q14005 1332 aa19.13■□□□□ 0.65
CLSTN3-216ENST00000545663 TLL1O43897 1013 aa19.12■□□□□ 0.65
CLSTN3-216ENST00000545663 CSF2RAP15509 400 aa19.12■□□□□ 0.65
CLSTN3-216ENST00000545663 SPTY2D1Q68D10 685 aaPredicted RBP19.12■□□□□ 0.65
CLSTN3-216ENST00000545663 MFSD5Q6N075 450 aa19.12■□□□□ 0.65
CLSTN3-216ENST00000545663 CATSPERGQ6ZRH7 1159 aa19.12■□□□□ 0.65
CLSTN3-216ENST00000545663 TEX11Q8IYF3 940 aa19.12■□□□□ 0.65
CLSTN3-216ENST00000545663 SH3RF3Q8TEJ3 882 aaPredicted RBP19.12■□□□□ 0.65
CLSTN3-216ENST00000545663 SLC28A3Q9HAS3 691 aa19.12■□□□□ 0.65
CLSTN3-216ENST00000545663 CEP126Q9P2H0 1117 aa19.12■□□□□ 0.65
CLSTN3-216ENST00000545663 SMIM22K7EJ46 135 aa19.11■□□□□ 0.65
CLSTN3-216ENST00000545663 ERC2O15083 957 aa19.11■□□□□ 0.65
CLSTN3-216ENST00000545663 DDX10Q13206 875 aaKnown RBP19.11■□□□□ 0.65
CLSTN3-216ENST00000545663 TBC1D9Q6ZT07 1266 aa19.11■□□□□ 0.65
CLSTN3-216ENST00000545663 ERICH6Q7L0X2 663 aa19.11■□□□□ 0.65
CLSTN3-216ENST00000545663 ANKRD33Q7Z3H0 272 aa19.11■□□□□ 0.65
CLSTN3-216ENST00000545663 TBX21Q9UL17 535 aa19.11■□□□□ 0.65
CLSTN3-216ENST00000545663 SIPA1L1O43166 1804 aa19.11■□□□□ 0.65
CLSTN3-216ENST00000545663 DCDC2CA8MYV0 355 aa19.1■□□□□ 0.65
CLSTN3-216ENST00000545663 RAB30Q15771 203 aa19.1■□□□□ 0.65
CLSTN3-216ENST00000545663 LENG1Q96BZ8 264 aaPredicted RBP19.1■□□□□ 0.65
CLSTN3-216ENST00000545663 NSUN4Q96CB9 384 aaKnown RBP19.1■□□□□ 0.65
CLSTN3-216ENST00000545663 MOV10L1Q9BXT6 1211 aaKnown RBP19.1■□□□□ 0.65
CLSTN3-216ENST00000545663 USP44Q9H0E7 712 aa19.1■□□□□ 0.65
CLSTN3-216ENST00000545663 CD320Q9NPF0 282 aa19.1■□□□□ 0.65
CLSTN3-216ENST00000545663 SPDYE16A6NNV3 312 aaPredicted RBP19.09■□□□□ 0.65
CLSTN3-216ENST00000545663 RFXAPO00287 272 aa19.09■□□□□ 0.65
CLSTN3-216ENST00000545663 MYOGP15173 224 aa19.09■□□□□ 0.65
CLSTN3-216ENST00000545663 RABGGTBP53611 331 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms