RNA–Protein interactions for RNA: ENST00000544891.6

NECAP1-207, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 4,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-207ENST00000544891 H0YIN7 160 aa10.05□□□□□ -0.8
NECAP1-207ENST00000544891 NLRP12P59046 1061 aa10.05□□□□□ -0.8
NECAP1-207ENST00000544891 MAP3K9P80192 1104 aa10.05□□□□□ -0.8
NECAP1-207ENST00000544891 TMED8Q6PL24 325 aaPredicted RBP10.05□□□□□ -0.8
NECAP1-207ENST00000544891 IGSF22Q8N9C0 903 aa10.05□□□□□ -0.8
NECAP1-207ENST00000544891 SPATA5Q8NB90 893 aa10.05□□□□□ -0.8
NECAP1-207ENST00000544891 LRWD1Q9UFC0 647 aa10.05□□□□□ -0.8
NECAP1-207ENST00000544891 GUCA1BQ9UMX6 200 aa10.05□□□□□ -0.8
NECAP1-207ENST00000544891 CRYBG1Q9Y4K1 1723 aa10.05□□□□□ -0.8
NECAP1-207ENST00000544891 SEMA3EO15041 775 aa10.05□□□□□ -0.8
NECAP1-207ENST00000544891 YWHAEP62258 255 aaKnown RBP10.05□□□□□ -0.8
NECAP1-207ENST00000544891 DPP8Q6V1X1 898 aaPredicted RBP10.05□□□□□ -0.8
NECAP1-207ENST00000544891 SYCE1Q8N0S2 351 aa10.05□□□□□ -0.8
NECAP1-207ENST00000544891 CSGALNACT2Q8N6G5 542 aa10.05□□□□□ -0.8
NECAP1-207ENST00000544891 UBL4BQ8N7F7 174 aa10.05□□□□□ -0.8
NECAP1-207ENST00000544891 DNM3Q9UQ16 869 aa10.05□□□□□ -0.8
NECAP1-207ENST00000544891 PARP4Q9UKK3 1724 aaKnown RBP10.05□□□□□ -0.8
NECAP1-207ENST00000544891 SLC1A4P43007 532 aa10.05□□□□□ -0.8
NECAP1-207ENST00000544891 STRN3Q13033 797 aa10.05□□□□□ -0.8
NECAP1-207ENST00000544891 MCM6Q14566 821 aa10.05□□□□□ -0.8
NECAP1-207ENST00000544891 INF2Q27J81 1249 aa10.05□□□□□ -0.8
NECAP1-207ENST00000544891 NBPF11Q86T75 865 aa10.05□□□□□ -0.8
NECAP1-207ENST00000544891 SUCLG2Q96I99 432 aa10.05□□□□□ -0.8
NECAP1-207ENST00000544891 NAPGQ99747 312 aaPredicted RBP10.05□□□□□ -0.8
NECAP1-207ENST00000544891 V9GY48 417 aaPredicted RBP10.05□□□□□ -0.8
NECAP1-207ENST00000544891 ADAMTS7Q9UKP4 1686 aa10.05□□□□□ -0.8
NECAP1-207ENST00000544891 GIGYF1O75420 1035 aaPredicted RBP10.04□□□□□ -0.8
NECAP1-207ENST00000544891 PCCAP05165 728 aaPredicted RBP10.04□□□□□ -0.8
NECAP1-207ENST00000544891 EIF6P56537 245 aaKnown RBP10.04□□□□□ -0.8
NECAP1-207ENST00000544891 RPS8P62241 208 aaKnown RBP10.04□□□□□ -0.8
NECAP1-207ENST00000544891 GOLGA5Q8TBA6 731 aa10.04□□□□□ -0.8
NECAP1-207ENST00000544891 RAB3IL1Q8TBN0 382 aa10.04□□□□□ -0.8
NECAP1-207ENST00000544891 ATRIPQ8WXE1 791 aa10.04□□□□□ -0.8
NECAP1-207ENST00000544891 TNS3Q68CZ2 1445 aa10.04□□□□□ -0.8
NECAP1-207ENST00000544891 FLOT1O75955 427 aa10.04□□□□□ -0.8
NECAP1-207ENST00000544891 STX17P56962 302 aa10.04□□□□□ -0.8
NECAP1-207ENST00000544891 ZNF174Q15697 407 aa10.04□□□□□ -0.8
NECAP1-207ENST00000544891 LEO1Q8WVC0 666 aaPredicted RBP10.04□□□□□ -0.8
NECAP1-207ENST00000544891 MAGEF1Q9HAY2 307 aa10.04□□□□□ -0.8
NECAP1-207ENST00000544891 CLEC11AQ9Y240 323 aa10.04□□□□□ -0.8
NECAP1-207ENST00000544891 ATP2B4P23634 1241 aa10.04□□□□□ -0.8
NECAP1-207ENST00000544891 ZBTB16Q05516 673 aa10.04□□□□□ -0.8
NECAP1-207ENST00000544891 PLS1Q14651 629 aa10.04□□□□□ -0.8
NECAP1-207ENST00000544891 KRT40Q6A162 431 aa10.04□□□□□ -0.8
NECAP1-207ENST00000544891 TRMT1LQ7Z2T5 733 aaKnown RBP10.04□□□□□ -0.8
NECAP1-207ENST00000544891 FAM169AQ9Y6X4 670 aa10.04□□□□□ -0.8
NECAP1-207ENST00000544891 SYNRGQ9UMZ2 1314 aa10.04□□□□□ -0.8
NECAP1-207ENST00000544891 A0A1B0GVL5 298 aa10.04□□□□□ -0.8
NECAP1-207ENST00000544891 NEURL1BA8MQ27 555 aa10.04□□□□□ -0.8
NECAP1-207ENST00000544891 MYCNP04198 464 aaPredicted RBP10.04□□□□□ -0.8
NECAP1-207ENST00000544891 ERCC5P28715 1186 aaPredicted RBP10.04□□□□□ -0.8
NECAP1-207ENST00000544891 SETDB1Q15047 1291 aa10.04□□□□□ -0.8
NECAP1-207ENST00000544891 PPFIA3O75145 1194 aa10.03□□□□□ -0.8
NECAP1-207ENST00000544891 BCRP11274 1271 aa10.03□□□□□ -0.8
NECAP1-207ENST00000544891 PPP1R7Q15435 360 aa10.03□□□□□ -0.8
NECAP1-207ENST00000544891 RUFY4Q6ZNE9 571 aa10.03□□□□□ -0.8
NECAP1-207ENST00000544891 VTI1AQ96AJ9 217 aa10.03□□□□□ -0.8
NECAP1-207ENST00000544891 ZNF496Q96IT1 587 aaPredicted RBP10.03□□□□□ -0.8
NECAP1-207ENST00000544891 MAK16Q9BXY0 300 aaKnown RBP10.03□□□□□ -0.8
NECAP1-207ENST00000544891 ARMT1Q9H993 441 aa10.03□□□□□ -0.8
NECAP1-207ENST00000544891 NKIRAS1Q9NYS0 192 aa10.03□□□□□ -0.8
NECAP1-207ENST00000544891 CCDC6Q16204 474 aa10.03□□□□□ -0.8
NECAP1-207ENST00000544891 SLC4A8Q2Y0W8 1093 aa10.03□□□□□ -0.8
NECAP1-207ENST00000544891 CCDC121Q6ZUS5 278 aa10.03□□□□□ -0.8
NECAP1-207ENST00000544891 CHST3Q7LGC8 479 aa10.03□□□□□ -0.8
NECAP1-207ENST00000544891 CCDC50Q8IVM0 306 aa10.03□□□□□ -0.8
NECAP1-207ENST00000544891 HACE1Q8IYU2 909 aa10.03□□□□□ -0.8
NECAP1-207ENST00000544891 REXO1Q8N1G1 1221 aaKnown RBP10.03□□□□□ -0.8
NECAP1-207ENST00000544891 TEKT1Q969V4 418 aa10.03□□□□□ -0.8
NECAP1-207ENST00000544891 IVNS1ABPQ9Y6Y0 642 aa10.03□□□□□ -0.8
NECAP1-207ENST00000544891 BIRC3Q13489 604 aa10.03□□□□□ -0.8
NECAP1-207ENST00000544891 RAPGEF1Q13905 1077 aa10.03□□□□□ -0.8
NECAP1-207ENST00000544891 ASIC2Q16515 512 aa10.03□□□□□ -0.8
NECAP1-207ENST00000544891 DNAJC10Q8IXB1 793 aa10.03□□□□□ -0.8
NECAP1-207ENST00000544891 IPO4Q8TEX9 1081 aaKnown RBP10.03□□□□□ -0.8
NECAP1-207ENST00000544891 TMX1Q9H3N1 280 aa10.03□□□□□ -0.8
NECAP1-207ENST00000544891 SLAIN2Q9P270 581 aa10.03□□□□□ -0.8
NECAP1-207ENST00000544891 STK10O94804 968 aaKnown RBP10.02□□□□□ -0.8
NECAP1-207ENST00000544891 ZNF202O95125 648 aa10.02□□□□□ -0.8
NECAP1-207ENST00000544891 DNM2P50570 870 aa10.02□□□□□ -0.8
NECAP1-207ENST00000544891 FANCCQ00597 558 aa10.02□□□□□ -0.8
NECAP1-207ENST00000544891 ADALQ6DHV7 355 aa10.02□□□□□ -0.8
NECAP1-207ENST00000544891 COPRSQ9NQ92 184 aa10.02□□□□□ -0.8
NECAP1-207ENST00000544891 SAMD15Q9P1V8 674 aa10.02□□□□□ -0.8
NECAP1-207ENST00000544891 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.02□□□□□ -0.8
NECAP1-207ENST00000544891 CACNA1FO60840 1977 aa10.02□□□□□ -0.81
NECAP1-207ENST00000544891 RIMBP2O15034 1052 aa10.02□□□□□ -0.81
NECAP1-207ENST00000544891 PIK3AP1Q6ZUJ8 805 aa10.02□□□□□ -0.81
NECAP1-207ENST00000544891 SNX29Q8TEQ0 813 aa10.02□□□□□ -0.81
NECAP1-207ENST00000544891 ZKSCAN3Q9BRR0 538 aa10.02□□□□□ -0.81
NECAP1-207ENST00000544891 SPOPO43791 374 aa10.02□□□□□ -0.81
NECAP1-207ENST00000544891 BRD1O95696 1058 aa10.02□□□□□ -0.81
NECAP1-207ENST00000544891 ARID5AQ03989 594 aa10.02□□□□□ -0.81
NECAP1-207ENST00000544891 TRPC3Q13507 836 aa10.02□□□□□ -0.81
NECAP1-207ENST00000544891 NLRX1Q86UT6 975 aa10.02□□□□□ -0.81
NECAP1-207ENST00000544891 IFT20Q8IY31 132 aa10.02□□□□□ -0.81
NECAP1-207ENST00000544891 FAM76AQ8TAV0 307 aa10.02□□□□□ -0.81
NECAP1-207ENST00000544891 MIS12Q9H081 205 aa10.02□□□□□ -0.81
NECAP1-207ENST00000544891 TNNQ9UQP3 1299 aa10.02□□□□□ -0.81
NECAP1-207ENST00000544891 STRCP1A6NGW2 1772 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms