RNA–Protein interactions for RNA: ENST00000544241.6

TCF4-209, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,264 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-209ENST00000544241 CCDC121Q6ZUS5 278 aa11.61□□□□□ -0.55
TCF4-209ENST00000544241 DDX46Q7L014 1031 aaKnown RBP11.61□□□□□ -0.55
TCF4-209ENST00000544241 APTXQ7Z2E3 356 aaKnown RBP11.61□□□□□ -0.55
TCF4-209ENST00000544241 CCDC13Q8IYE1 715 aa11.61□□□□□ -0.55
TCF4-209ENST00000544241 NCOA7Q8NI08 942 aa11.61□□□□□ -0.55
TCF4-209ENST00000544241 PRR36Q9H6K5 1346 aa11.61□□□□□ -0.55
TCF4-209ENST00000544241 PES1O00541 588 aaKnown RBP11.61□□□□□ -0.55
TCF4-209ENST00000544241 POLR2DO15514 142 aaKnown RBP11.61□□□□□ -0.55
TCF4-209ENST00000544241 PRC1O43663 620 aa11.61□□□□□ -0.55
TCF4-209ENST00000544241 LSP1P33241 339 aa11.61□□□□□ -0.55
TCF4-209ENST00000544241 CEBPAP49715 358 aaPredicted RBP11.61□□□□□ -0.55
TCF4-209ENST00000544241 FXR1P51114 621 aaKnown RBP eCLIP11.61□□□□□ -0.55
TCF4-209ENST00000544241 SLMAPQ14BN4 828 aa11.61□□□□□ -0.55
TCF4-209ENST00000544241 SAFBQ15424 915 aaKnown RBP eCLIP11.61□□□□□ -0.55
TCF4-209ENST00000544241 CCDC122Q5T0U0 273 aa11.61□□□□□ -0.55
TCF4-209ENST00000544241 NAA35Q5VZE5 725 aa11.61□□□□□ -0.55
TCF4-209ENST00000544241 KRT40Q6A162 431 aa11.61□□□□□ -0.55
TCF4-209ENST00000544241 RCSD1Q6JBY9 416 aa11.61□□□□□ -0.55
TCF4-209ENST00000544241 ARMC9Q7Z3E5 817 aa11.61□□□□□ -0.55
TCF4-209ENST00000544241 CEP57Q86XR8 500 aa11.61□□□□□ -0.55
TCF4-209ENST00000544241 PARP9Q8IXQ6 854 aa11.61□□□□□ -0.55
TCF4-209ENST00000544241 MMGT1Q8N4V1 131 aa11.61□□□□□ -0.55
TCF4-209ENST00000544241 ARFGAP2Q8N6H7 521 aa11.61□□□□□ -0.55
TCF4-209ENST00000544241 C1orf131Q8NDD1 294 aaKnown RBP11.61□□□□□ -0.55
TCF4-209ENST00000544241 WASF1Q92558 559 aa11.61□□□□□ -0.55
TCF4-209ENST00000544241 CCDC114Q96M63 670 aa11.61□□□□□ -0.55
TCF4-209ENST00000544241 SLF1Q9BQI6 1058 aa11.61□□□□□ -0.55
TCF4-209ENST00000544241 NBPF3Q9H094 633 aa11.61□□□□□ -0.55
TCF4-209ENST00000544241 CENPHQ9H3R5 247 aa11.61□□□□□ -0.55
TCF4-209ENST00000544241 A0A0U1RQJ8 604 aa11.6□□□□□ -0.55
TCF4-209ENST00000544241 N4BP3O15049 544 aa11.6□□□□□ -0.55
TCF4-209ENST00000544241 FAM107AO95990 144 aa11.6□□□□□ -0.55
TCF4-209ENST00000544241 SSR1P43307 286 aaKnown RBP11.6□□□□□ -0.55
TCF4-209ENST00000544241 ERVK-24P63145 666 aa11.6□□□□□ -0.55
TCF4-209ENST00000544241 ICA1Q05084 483 aa11.6□□□□□ -0.55
TCF4-209ENST00000544241 CHST3Q7LGC8 479 aa11.6□□□□□ -0.55
TCF4-209ENST00000544241 ATRIPQ8WXE1 791 aa11.6□□□□□ -0.55
TCF4-209ENST00000544241 CAVIN3Q969G5 261 aa11.6□□□□□ -0.55
TCF4-209ENST00000544241 SGSM3Q96HU1 749 aa11.6□□□□□ -0.55
TCF4-209ENST00000544241 KAZALD1Q96I82 304 aa11.6□□□□□ -0.55
TCF4-209ENST00000544241 GDAP1L1Q96MZ0 367 aa11.6□□□□□ -0.55
TCF4-209ENST00000544241 SPATS2LQ9NUQ6 558 aaKnown RBP11.6□□□□□ -0.55
TCF4-209ENST00000544241 PAG1Q9NWQ8 432 aa11.6□□□□□ -0.55
TCF4-209ENST00000544241 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.6□□□□□ -0.55
TCF4-209ENST00000544241 LRRC10BA6NIK2 292 aa11.6□□□□□ -0.55
TCF4-209ENST00000544241 BTBD11A6QL63 1104 aa11.6□□□□□ -0.55
TCF4-209ENST00000544241 PPP1R37O75864 691 aa11.6□□□□□ -0.55
TCF4-209ENST00000544241 TFRCP02786 760 aaKnown RBP11.6□□□□□ -0.55
TCF4-209ENST00000544241 TNFRSF8P28908 595 aa11.6□□□□□ -0.55
TCF4-209ENST00000544241 KRT9P35527 623 aa11.6□□□□□ -0.55
TCF4-209ENST00000544241 RILPL1Q5EBL4 403 aa11.6□□□□□ -0.55
TCF4-209ENST00000544241 ARMC2Q8NEN0 867 aa11.6□□□□□ -0.55
TCF4-209ENST00000544241 GSDMAQ96QA5 445 aa11.6□□□□□ -0.55
TCF4-209ENST00000544241 TSGA10Q9BZW7 698 aa11.6□□□□□ -0.55
TCF4-209ENST00000544241 SLC40A1Q9NP59 571 aa11.6□□□□□ -0.55
TCF4-209ENST00000544241 HPS5Q9UPZ3 1129 aa11.6□□□□□ -0.55
TCF4-209ENST00000544241 PTPREP23469 700 aa11.59□□□□□ -0.55
TCF4-209ENST00000544241 GBP2P32456 591 aaPredicted RBP11.59□□□□□ -0.55
TCF4-209ENST00000544241 CYLC1P35663 651 aaPredicted RBP11.59□□□□□ -0.55
TCF4-209ENST00000544241 VAV2P52735 878 aa11.59□□□□□ -0.55
TCF4-209ENST00000544241 PDCLQ13371 301 aa11.59□□□□□ -0.55
TCF4-209ENST00000544241 GRIPAP1Q4V328 841 aa11.59□□□□□ -0.55
TCF4-209ENST00000544241 DHX37Q8IY37 1157 aaKnown RBP11.59□□□□□ -0.55
TCF4-209ENST00000544241 OR8K1Q8NGG5 319 aa11.59□□□□□ -0.55
TCF4-209ENST00000544241 ZNF473Q8WTR7 871 aaKnown RBP11.59□□□□□ -0.55
TCF4-209ENST00000544241 JADE2Q9NQC1 790 aa11.59□□□□□ -0.55
TCF4-209ENST00000544241 SERTAD1Q9UHV2 236 aa11.59□□□□□ -0.55
TCF4-209ENST00000544241 KLHL33A6NCF5 533 aa11.58□□□□□ -0.55
TCF4-209ENST00000544241 ENC1O14682 589 aa11.58□□□□□ -0.55
TCF4-209ENST00000544241 ATP1A1P05023 1023 aaKnown RBP11.58□□□□□ -0.55
TCF4-209ENST00000544241 GLE1Q53GS7 698 aaKnown RBP11.58□□□□□ -0.55
TCF4-209ENST00000544241 SPECC1Q5M775 1068 aa11.58□□□□□ -0.55
TCF4-209ENST00000544241 CYB5D1Q6P9G0 228 aa11.58□□□□□ -0.55
TCF4-209ENST00000544241 HOOK2Q96ED9 719 aa11.58□□□□□ -0.55
TCF4-209ENST00000544241 CAPZA3Q96KX2 299 aa11.58□□□□□ -0.55
TCF4-209ENST00000544241 SH3GL3Q99963 347 aa11.58□□□□□ -0.55
TCF4-209ENST00000544241 EHD4Q9H223 541 aa11.58□□□□□ -0.55
TCF4-209ENST00000544241 LIMA1Q9UHB6 759 aaKnown RBP11.58□□□□□ -0.55
TCF4-209ENST00000544241 HMGB1P1B2RPK0 211 aaPredicted RBP11.58□□□□□ -0.56
TCF4-209ENST00000544241 RNF113AO15541 343 aaKnown RBP11.58□□□□□ -0.56
TCF4-209ENST00000544241 PRLRP16471 622 aa11.58□□□□□ -0.56
TCF4-209ENST00000544241 METAP2P50579 478 aaKnown RBP eCLIP11.58□□□□□ -0.56
TCF4-209ENST00000544241 TFCP2Q12800 502 aa11.58□□□□□ -0.56
TCF4-209ENST00000544241 ZNF572Q7Z3I7 529 aaPredicted RBP11.58□□□□□ -0.56
TCF4-209ENST00000544241 BSDC1Q9NW68 430 aaPredicted RBP11.58□□□□□ -0.56
TCF4-209ENST00000544241 ZNHIT6Q9NWK9 470 aaKnown RBP11.58□□□□□ -0.56
TCF4-209ENST00000544241 GOLGA6L10A6NI86 522 aa11.57□□□□□ -0.56
TCF4-209ENST00000544241 FOXN1O15353 648 aa11.57□□□□□ -0.56
TCF4-209ENST00000544241 ZMYND10O75800 440 aa11.57□□□□□ -0.56
TCF4-209ENST00000544241 ZFYP08048 801 aaPredicted RBP11.57□□□□□ -0.56
TCF4-209ENST00000544241 MYBL2P10244 700 aa11.57□□□□□ -0.56
TCF4-209ENST00000544241 IDEP14735 1019 aa11.57□□□□□ -0.56
TCF4-209ENST00000544241 PAX7P23759 505 aa11.57□□□□□ -0.56
TCF4-209ENST00000544241 CUL4BQ13620 913 aa11.57□□□□□ -0.56
TCF4-209ENST00000544241 PTGISQ16647 500 aa11.57□□□□□ -0.56
TCF4-209ENST00000544241 ZNF827Q17R98 1081 aa11.57□□□□□ -0.56
TCF4-209ENST00000544241 AP1ARQ63HQ0 302 aa11.57□□□□□ -0.56
TCF4-209ENST00000544241 PPP4R3AQ6IN85 833 aa11.57□□□□□ -0.56
TCF4-209ENST00000544241 NLRP14Q86W24 1093 aa11.57□□□□□ -0.56
TCF4-209ENST00000544241 NOSTRINQ8IVI9 506 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms