RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 NACA2Q9H009 215 aa17.09■□□□□ 0.33
CHD4-210ENST00000544040 PTPN23Q9H3S7 1636 aa17.09■□□□□ 0.33
CHD4-210ENST00000544040 SPECC1L-ADORA2AF8WAN1 911 aa17.09■□□□□ 0.33
CHD4-210ENST00000544040 SETSIPP0DME0 302 aa17.09■□□□□ 0.33
CHD4-210ENST00000544040 VPS41P49754 854 aa17.09■□□□□ 0.33
CHD4-210ENST00000544040 XPO4Q9C0E2 1151 aaKnown RBP17.08■□□□□ 0.33
CHD4-210ENST00000544040 LRWD1Q9UFC0 647 aa17.08■□□□□ 0.33
CHD4-210ENST00000544040 PPME1Q9Y570 386 aa17.08■□□□□ 0.33
CHD4-210ENST00000544040 FLOT1O75955 427 aa17.08■□□□□ 0.33
CHD4-210ENST00000544040 VAMP4O75379 141 aa17.08■□□□□ 0.32
CHD4-210ENST00000544040 DPH5Q9H2P9 285 aa17.08■□□□□ 0.32
CHD4-210ENST00000544040 MX2P20592 715 aa17.08■□□□□ 0.32
CHD4-210ENST00000544040 CROCCP2Q86T23 111 aa17.08■□□□□ 0.32
CHD4-210ENST00000544040 GABPB2Q8TAK5 448 aaPredicted RBP17.08■□□□□ 0.32
CHD4-210ENST00000544040 RSAD2Q8WXG1 361 aa17.08■□□□□ 0.32
CHD4-210ENST00000544040 KCNK3O14649 394 aa17.08■□□□□ 0.32
CHD4-210ENST00000544040 MGEA5O60502 916 aa17.08■□□□□ 0.32
CHD4-210ENST00000544040 CABP7Q86V35 215 aa17.08■□□□□ 0.32
CHD4-210ENST00000544040 CCDC125Q86Z20 511 aa17.08■□□□□ 0.32
CHD4-210ENST00000544040 SYNJ1O43426 1573 aa17.08■□□□□ 0.32
CHD4-210ENST00000544040 RBBP5Q15291 538 aaKnown RBP17.07■□□□□ 0.32
CHD4-210ENST00000544040 SAR1BQ9Y6B6 198 aa17.07■□□□□ 0.32
CHD4-210ENST00000544040 JAK2O60674 1132 aa17.07■□□□□ 0.32
CHD4-210ENST00000544040 PPFIA4O75335 1185 aa17.07■□□□□ 0.32
CHD4-210ENST00000544040 MORC4Q8TE76 937 aa17.07■□□□□ 0.32
CHD4-210ENST00000544040 KLHL14Q9P2G3 628 aa17.07■□□□□ 0.32
CHD4-210ENST00000544040 BCRP11274 1271 aa17.07■□□□□ 0.32
CHD4-210ENST00000544040 RASSF2P50749 326 aa17.07■□□□□ 0.32
CHD4-210ENST00000544040 CALCRLQ16602 461 aa17.07■□□□□ 0.32
CHD4-210ENST00000544040 ANKFY1Q9P2R3 1169 aa17.07■□□□□ 0.32
CHD4-210ENST00000544040 TPTE2Q6XPS3 522 aa17.07■□□□□ 0.32
CHD4-210ENST00000544040 IFNB1P01574 187 aa17.07■□□□□ 0.32
CHD4-210ENST00000544040 PPP4R1Q8TF05 950 aa17.07■□□□□ 0.32
CHD4-210ENST00000544040 TSKSQ9UJT2 592 aa17.07■□□□□ 0.32
CHD4-210ENST00000544040 TTC6Q86TZ1 520 aa17.06■□□□□ 0.32
CHD4-210ENST00000544040 TMEM87BQ96K49 555 aa17.06■□□□□ 0.32
CHD4-210ENST00000544040 RAB17Q9H0T7 212 aa17.06■□□□□ 0.32
CHD4-210ENST00000544040 XAB2Q9HCS7 855 aaKnown RBP17.06■□□□□ 0.32
CHD4-210ENST00000544040 AATFQ9NY61 560 aaKnown RBP eCLIP17.06■□□□□ 0.32
CHD4-210ENST00000544040 DNM3Q9UQ16 869 aa17.06■□□□□ 0.32
CHD4-210ENST00000544040 CLTAP09496 248 aa17.06■□□□□ 0.32
CHD4-210ENST00000544040 ZNF594Q96JF6 807 aaPredicted RBP17.06■□□□□ 0.32
CHD4-210ENST00000544040 ANGEL1Q9UNK9 670 aaKnown RBP17.06■□□□□ 0.32
CHD4-210ENST00000544040 NOP56O00567 594 aaKnown RBP17.06■□□□□ 0.32
CHD4-210ENST00000544040 STMN1P16949 149 aa17.06■□□□□ 0.32
CHD4-210ENST00000544040 SAT1P21673 171 aa17.06■□□□□ 0.32
CHD4-210ENST00000544040 NSMCE1Q8WV22 266 aa17.06■□□□□ 0.32
CHD4-210ENST00000544040 ATP2A3Q93084 1043 aa17.06■□□□□ 0.32
CHD4-210ENST00000544040 BIN2Q9UBW5 565 aaPredicted RBP17.06■□□□□ 0.32
CHD4-210ENST00000544040 SERTAD1Q9UHV2 236 aa17.06■□□□□ 0.32
CHD4-210ENST00000544040 AMFRQ9UKV5 643 aa17.06■□□□□ 0.32
CHD4-210ENST00000544040 STAG1Q8WVM7 1258 aa17.06■□□□□ 0.32
CHD4-210ENST00000544040 ANKRD2Q9GZV1 360 aa17.06■□□□□ 0.32
CHD4-210ENST00000544040 MRPL46Q9H2W6 279 aaKnown RBP17.06■□□□□ 0.32
CHD4-210ENST00000544040 VCX3AQ9NNX9 186 aa17.06■□□□□ 0.32
CHD4-210ENST00000544040 IL1RL1Q01638 556 aa17.06■□□□□ 0.32
CHD4-210ENST00000544040 KRIT1O00522 736 aa17.05■□□□□ 0.32
CHD4-210ENST00000544040 ADCY8P40145 1251 aa17.05■□□□□ 0.32
CHD4-210ENST00000544040 TNNI3KQ59H18 835 aa17.05■□□□□ 0.32
CHD4-210ENST00000544040 C14orf93Q9H972 538 aaKnown RBP17.05■□□□□ 0.32
CHD4-210ENST00000544040 SEPT10Q9P0V9 454 aa17.05■□□□□ 0.32
CHD4-210ENST00000544040 DENND2AQ9ULE3 1009 aa17.05■□□□□ 0.32
CHD4-210ENST00000544040 NOD1Q9Y239 953 aa17.05■□□□□ 0.32
CHD4-210ENST00000544040 FPGT-TNNI3KV9GXZ4 949 aa17.05■□□□□ 0.32
CHD4-210ENST00000544040 PRPF6O94906 941 aaKnown RBP17.05■□□□□ 0.32
CHD4-210ENST00000544040 CABLES1Q8TDN4 633 aa17.05■□□□□ 0.32
CHD4-210ENST00000544040 FAM89AQ96GI7 184 aa17.05■□□□□ 0.32
CHD4-210ENST00000544040 SCYL1Q96KG9 808 aa17.05■□□□□ 0.32
CHD4-210ENST00000544040 CACYBPQ9HB71 228 aaKnown RBP17.05■□□□□ 0.32
CHD4-210ENST00000544040 ASXL1Q8IXJ9 1541 aa17.05■□□□□ 0.32
CHD4-210ENST00000544040 ADCY7P51828 1080 aa17.05■□□□□ 0.32
CHD4-210ENST00000544040 PDZD8Q8NEN9 1154 aa17.05■□□□□ 0.32
CHD4-210ENST00000544040 FAM71BQ8TC56 605 aa17.05■□□□□ 0.32
CHD4-210ENST00000544040 CAPS2Q9BXY5 557 aa17.05■□□□□ 0.32
CHD4-210ENST00000544040 HIP1RO75146 1068 aa17.05■□□□□ 0.32
CHD4-210ENST00000544040 SERPINB6P35237 376 aa17.05■□□□□ 0.32
CHD4-210ENST00000544040 CFAP61Q8NHU2 1237 aa17.05■□□□□ 0.32
CHD4-210ENST00000544040 PPIP5K1Q6PFW1 1433 aa17.05■□□□□ 0.32
CHD4-210ENST00000544040 PHLDB3Q6NSJ2 640 aa17.05■□□□□ 0.32
CHD4-210ENST00000544040 RNF168Q8IYW5 571 aaPredicted RBP17.05■□□□□ 0.32
CHD4-210ENST00000544040 PCDHB13Q9Y5F0 798 aa17.05■□□□□ 0.32
CHD4-210ENST00000544040 GPAA1O43292 621 aa17.04■□□□□ 0.32
CHD4-210ENST00000544040 RPSAP08865 295 aaKnown RBP17.04■□□□□ 0.32
CHD4-210ENST00000544040 G2E3Q7L622 706 aa17.04■□□□□ 0.32
CHD4-210ENST00000544040 SPDL1Q96EA4 605 aa17.04■□□□□ 0.32
CHD4-210ENST00000544040 LLPHQ9BRT6 129 aaKnown RBP17.04■□□□□ 0.32
CHD4-210ENST00000544040 ANO3Q9BYT9 981 aa17.04■□□□□ 0.32
CHD4-210ENST00000544040 ITGA6P23229 1130 aa17.04■□□□□ 0.32
CHD4-210ENST00000544040 SCYL2Q6P3W7 929 aa17.04■□□□□ 0.32
CHD4-210ENST00000544040 MIER3Q7Z3K6 550 aa17.04■□□□□ 0.32
CHD4-210ENST00000544040 DBNDD2Q9BQY9 259 aa17.04■□□□□ 0.32
CHD4-210ENST00000544040 ST7Q9NRC1 585 aa17.04■□□□□ 0.32
CHD4-210ENST00000544040 PARP2Q9UGN5 583 aa17.04■□□□□ 0.32
CHD4-210ENST00000544040 SORBS3O60504 671 aa17.04■□□□□ 0.32
CHD4-210ENST00000544040 DBN1Q16643 649 aa17.04■□□□□ 0.32
CHD4-210ENST00000544040 KRT40Q6A162 431 aa17.04■□□□□ 0.32
CHD4-210ENST00000544040 GJA3Q9Y6H8 435 aa17.04■□□□□ 0.32
CHD4-210ENST00000544040 GOLGA8KD6RF30 607 aa17.04■□□□□ 0.32
CHD4-210ENST00000544040 HVCN1Q96D96 273 aa17.04■□□□□ 0.32
CHD4-210ENST00000544040 XAGE2Q96GT9 111 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms