RNA–Protein interactions for RNA: ENST00000544004.1

AP000439.1-201, humanhuman

TSL 4 BASIC

Gene AP000439.1, Length 581 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000439.1-201ENST00000544004 USP17L13C9JLJ4 530 aa13.94□□□□□ -0.18
AP000439.1-201ENST00000544004 USP17L11C9JVI0 530 aa13.94□□□□□ -0.18
AP000439.1-201ENST00000544004 USP17L18D6R9N7 530 aa13.94□□□□□ -0.18
AP000439.1-201ENST00000544004 USP17L22D6RA61 530 aa13.94□□□□□ -0.18
AP000439.1-201ENST00000544004 USP17L17D6RBQ6 530 aa13.94□□□□□ -0.18
AP000439.1-201ENST00000544004 USP17L19D6RCP7 530 aa13.94□□□□□ -0.18
AP000439.1-201ENST00000544004 USP17L20D6RJB6 530 aa13.94□□□□□ -0.18
AP000439.1-201ENST00000544004 IGHA2P01877 340 aa13.94□□□□□ -0.18
AP000439.1-201ENST00000544004 UBTFL1P0CB47 393 aaPredicted RBP13.94□□□□□ -0.18
AP000439.1-201ENST00000544004 DNAJB2P25686 324 aa13.94□□□□□ -0.18
AP000439.1-201ENST00000544004 ADCYAP1R1P41586 468 aa13.94□□□□□ -0.18
AP000439.1-201ENST00000544004 EPHB4P54760 987 aa13.94□□□□□ -0.18
AP000439.1-201ENST00000544004 USP17L24Q0WX57 530 aa13.94□□□□□ -0.18
AP000439.1-201ENST00000544004 MVPQ14764 893 aaKnown RBP13.94□□□□□ -0.18
AP000439.1-201ENST00000544004 ZYXQ15942 572 aaKnown RBP13.94□□□□□ -0.18
AP000439.1-201ENST00000544004 PI16Q6UXB8 463 aa13.94□□□□□ -0.18
AP000439.1-201ENST00000544004 METTL16Q86W50 562 aaKnown RBP13.94□□□□□ -0.18
AP000439.1-201ENST00000544004 PPM1EQ8WY54 764 aa13.94□□□□□ -0.18
AP000439.1-201ENST00000544004 ZNF576Q9H609 170 aa13.94□□□□□ -0.18
AP000439.1-201ENST00000544004 COPRSQ9NQ92 184 aa13.94□□□□□ -0.18
AP000439.1-201ENST00000544004 TACC3Q9Y6A5 838 aa13.94□□□□□ -0.18
AP000439.1-201ENST00000544004 FOCADQ5VW36 1801 aa13.94□□□□□ -0.18
AP000439.1-201ENST00000544004 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.93□□□□□ -0.18
AP000439.1-201ENST00000544004 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.93□□□□□ -0.18
AP000439.1-201ENST00000544004 TLE2Q04725 743 aa13.93□□□□□ -0.18
AP000439.1-201ENST00000544004 C1orf53Q5VUE5 145 aa13.93□□□□□ -0.18
AP000439.1-201ENST00000544004 CATSPERGQ6ZRH7 1159 aa13.93□□□□□ -0.18
AP000439.1-201ENST00000544004 DPP9Q86TI2 863 aa13.93□□□□□ -0.18
AP000439.1-201ENST00000544004 MAPKAPK5Q8IW41 473 aa13.93□□□□□ -0.18
AP000439.1-201ENST00000544004 SPATA5Q8NB90 893 aa13.93□□□□□ -0.18
AP000439.1-201ENST00000544004 TGFBRAP1Q8WUH2 860 aa13.93□□□□□ -0.18
AP000439.1-201ENST00000544004 ATXN2LQ8WWM7 1075 aaKnown RBP13.93□□□□□ -0.18
AP000439.1-201ENST00000544004 C12orf42Q96LP6 360 aa13.93□□□□□ -0.18
AP000439.1-201ENST00000544004 NOL10Q9BSC4 688 aaKnown RBP13.93□□□□□ -0.18
AP000439.1-201ENST00000544004 AATFQ9NY61 560 aaKnown RBP eCLIP13.93□□□□□ -0.18
AP000439.1-201ENST00000544004 BTBD7Q9P203 1132 aa13.93□□□□□ -0.18
AP000439.1-201ENST00000544004 AKAP2Q9Y2D5 859 aa13.93□□□□□ -0.18
AP000439.1-201ENST00000544004 SEPT4O43236 478 aa13.92□□□□□ -0.18
AP000439.1-201ENST00000544004 MAP3K12Q12852 859 aa13.92□□□□□ -0.18
AP000439.1-201ENST00000544004 ADAMTS19Q8TE59 1207 aa13.92□□□□□ -0.18
AP000439.1-201ENST00000544004 NEUROD6Q96NK8 337 aa13.92□□□□□ -0.18
AP000439.1-201ENST00000544004 ASB2Q96Q27 587 aa13.92□□□□□ -0.18
AP000439.1-201ENST00000544004 FEZ1Q99689 392 aa13.92□□□□□ -0.18
AP000439.1-201ENST00000544004 MRS2Q9HD23 443 aa13.92□□□□□ -0.18
AP000439.1-201ENST00000544004 LRP2BPQ9P2M1 347 aa13.92□□□□□ -0.18
AP000439.1-201ENST00000544004 PALD1Q9ULE6 856 aa13.92□□□□□ -0.18
AP000439.1-201ENST00000544004 FLT1P17948 1338 aa13.91□□□□□ -0.18
AP000439.1-201ENST00000544004 BAG3O95817 575 aa13.91□□□□□ -0.18
AP000439.1-201ENST00000544004 GH2P01242 217 aa13.91□□□□□ -0.18
AP000439.1-201ENST00000544004 CLTBP09497 229 aa13.91□□□□□ -0.18
AP000439.1-201ENST00000544004 RAG1P15918 1043 aa13.91□□□□□ -0.18
AP000439.1-201ENST00000544004 TFCP2Q12800 502 aa13.91□□□□□ -0.18
AP000439.1-201ENST00000544004 LRRC41Q15345 812 aa13.91□□□□□ -0.18
AP000439.1-201ENST00000544004 PRAMEF19Q5SWL8 479 aa13.91□□□□□ -0.18
AP000439.1-201ENST00000544004 OLFML2BQ68BL8 750 aa13.91□□□□□ -0.18
AP000439.1-201ENST00000544004 LBX2Q6XYB7 198 aa13.91□□□□□ -0.18
AP000439.1-201ENST00000544004 SSH1Q8WYL5 1049 aa13.91□□□□□ -0.18
AP000439.1-201ENST00000544004 TIFAQ96CG3 184 aa13.91□□□□□ -0.18
AP000439.1-201ENST00000544004 UHRF1Q96T88 793 aaPredicted RBP13.91□□□□□ -0.18
AP000439.1-201ENST00000544004 GAS2L1Q99501 681 aaPredicted RBP13.91□□□□□ -0.18
AP000439.1-201ENST00000544004 THEGQ9P2T0 379 aa13.91□□□□□ -0.18
AP000439.1-201ENST00000544004 ZNF236Q9UL36 1845 aa13.91□□□□□ -0.18
AP000439.1-201ENST00000544004 PLCG2P16885 1265 aa13.9□□□□□ -0.18
AP000439.1-201ENST00000544004 ADORA2AP29274 412 aa13.9□□□□□ -0.18
AP000439.1-201ENST00000544004 HOXD11P31277 338 aaPredicted RBP13.9□□□□□ -0.18
AP000439.1-201ENST00000544004 FPGSQ05932 587 aa13.9□□□□□ -0.18
AP000439.1-201ENST00000544004 GORABQ5T7V8 394 aa13.9□□□□□ -0.18
AP000439.1-201ENST00000544004 NAA16Q6N069 864 aaPredicted RBP13.9□□□□□ -0.18
AP000439.1-201ENST00000544004 SAP30BPQ9UHR5 308 aaKnown RBP13.9□□□□□ -0.18
AP000439.1-201ENST00000544004 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.9□□□□□ -0.18
AP000439.1-201ENST00000544004 PLXNA1Q9UIW2 1896 aa13.9□□□□□ -0.18
AP000439.1-201ENST00000544004 SPDYE16A6NNV3 312 aaPredicted RBP13.89□□□□□ -0.19
AP000439.1-201ENST00000544004 KIAA0355O15063 1070 aa13.89□□□□□ -0.19
AP000439.1-201ENST00000544004 HLA-DOAP06340 250 aa13.89□□□□□ -0.19
AP000439.1-201ENST00000544004 VCAM1P19320 739 aa13.89□□□□□ -0.19
AP000439.1-201ENST00000544004 MCAMP43121 646 aa13.89□□□□□ -0.19
AP000439.1-201ENST00000544004 USP14P54578 494 aa13.89□□□□□ -0.19
AP000439.1-201ENST00000544004 PPP4CP60510 307 aa13.89□□□□□ -0.19
AP000439.1-201ENST00000544004 FAM47AQ5JRC9 791 aa13.89□□□□□ -0.19
AP000439.1-201ENST00000544004 SMCHD1A6NHR9 2005 aa13.89□□□□□ -0.19
AP000439.1-201ENST00000544004 MYH1P12882 1939 aa13.88□□□□□ -0.19
AP000439.1-201ENST00000544004 STRNO43815 780 aa13.88□□□□□ -0.19
AP000439.1-201ENST00000544004 PQBP1O60828 265 aaKnown RBP13.88□□□□□ -0.19
AP000439.1-201ENST00000544004 COBLO75128 1261 aa13.88□□□□□ -0.19
AP000439.1-201ENST00000544004 ARID4AP29374 1257 aaPredicted RBP13.88□□□□□ -0.19
AP000439.1-201ENST00000544004 MRPS5P82675 430 aaKnown RBP13.88□□□□□ -0.19
AP000439.1-201ENST00000544004 RAB3GAP1Q15042 981 aa13.88□□□□□ -0.19
AP000439.1-201ENST00000544004 AKNAD1Q5T1N1 836 aa13.88□□□□□ -0.19
AP000439.1-201ENST00000544004 ATF7IPQ6VMQ6 1270 aa13.88□□□□□ -0.19
AP000439.1-201ENST00000544004 MOV10L1Q9BXT6 1211 aaKnown RBP13.88□□□□□ -0.19
AP000439.1-201ENST00000544004 KIAA1683Q9H0B3 1180 aa13.88□□□□□ -0.19
AP000439.1-201ENST00000544004 PRDM12Q9H4Q4 367 aa13.88□□□□□ -0.19
AP000439.1-201ENST00000544004 RPAP3Q9H6T3 665 aaPredicted RBP13.88□□□□□ -0.19
AP000439.1-201ENST00000544004 TMEM39AQ9NV64 488 aa13.88□□□□□ -0.19
AP000439.1-201ENST00000544004 PHF24Q9UPV7 400 aa13.88□□□□□ -0.19
AP000439.1-201ENST00000544004 MYO5AQ9Y4I1 1855 aaKnown RBP13.88□□□□□ -0.19
AP000439.1-201ENST00000544004 TCF20Q9UGU0 1960 aaKnown RBP13.87□□□□□ -0.19
AP000439.1-201ENST00000544004 PBX2P40425 430 aa13.87□□□□□ -0.19
AP000439.1-201ENST00000544004 CCDC85BQ15834 202 aaPredicted RBP13.87□□□□□ -0.19
AP000439.1-201ENST00000544004 ADGRA1Q86SQ6 560 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms