RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 EXOC5O00471 708 aa15.61■□□□□ 0.09
VPS33A-208ENST00000543633 ADKP55263 362 aaKnown RBP15.61■□□□□ 0.09
VPS33A-208ENST00000543633 GRIN1Q05586 938 aa15.61■□□□□ 0.09
VPS33A-208ENST00000543633 GPS2Q13227 327 aa15.61■□□□□ 0.09
VPS33A-208ENST00000543633 FILIP1LQ4L180 1135 aa15.61■□□□□ 0.09
VPS33A-208ENST00000543633 CNGA4Q8IV77 575 aa15.61■□□□□ 0.09
VPS33A-208ENST00000543633 FANCBQ8NB91 859 aa15.61■□□□□ 0.09
VPS33A-208ENST00000543633 NGLY1Q96IV0 654 aa15.61■□□□□ 0.09
VPS33A-208ENST00000543633 MED15Q96RN5 788 aa15.61■□□□□ 0.09
VPS33A-208ENST00000543633 TRMT112Q9UI30 125 aaKnown RBP15.61■□□□□ 0.09
VPS33A-208ENST00000543633 KCNJ14Q9UNX9 436 aa15.61■□□□□ 0.09
VPS33A-208ENST00000543633 ZNF330Q9Y3S2 320 aaPredicted RBP15.61■□□□□ 0.09
VPS33A-208ENST00000543633 ADGRG1Q9Y653 693 aa15.61■□□□□ 0.09
VPS33A-208ENST00000543633 TACC3Q9Y6A5 838 aa15.61■□□□□ 0.09
VPS33A-208ENST00000543633 DUOX1Q9NRD9 1551 aa15.61■□□□□ 0.09
VPS33A-208ENST00000543633 TDO2P48775 406 aa15.61■□□□□ 0.09
VPS33A-208ENST00000543633 HLFQ16534 295 aa15.61■□□□□ 0.09
VPS33A-208ENST00000543633 RASGRP2Q7LDG7 609 aa15.61■□□□□ 0.09
VPS33A-208ENST00000543633 SRGAP1Q7Z6B7 1085 aa15.61■□□□□ 0.09
VPS33A-208ENST00000543633 TRMT44Q8IYL2 757 aaKnown RBP15.61■□□□□ 0.09
VPS33A-208ENST00000543633 CCDC12Q8WUD4 166 aaPredicted RBP15.61■□□□□ 0.09
VPS33A-208ENST00000543633 DHX58Q96C10 678 aa15.61■□□□□ 0.09
VPS33A-208ENST00000543633 CSRNP2Q9H175 543 aa15.61■□□□□ 0.09
VPS33A-208ENST00000543633 ADD3Q9UEY8 706 aaKnown RBP15.61■□□□□ 0.09
VPS33A-208ENST00000543633 TTF2Q9UNY4 1162 aaKnown RBP15.61■□□□□ 0.09
VPS33A-208ENST00000543633 IQSEC3Q9UPP2 1182 aaPredicted RBP15.61■□□□□ 0.09
VPS33A-208ENST00000543633 KIF5CO60282 957 aa15.6■□□□□ 0.09
VPS33A-208ENST00000543633 MFAP3LO75121 409 aa15.6■□□□□ 0.09
VPS33A-208ENST00000543633 TUBBP07437 444 aa15.6■□□□□ 0.09
VPS33A-208ENST00000543633 RASGRF1Q13972 1273 aa15.6■□□□□ 0.09
VPS33A-208ENST00000543633 TRIM14Q14142 442 aa15.6■□□□□ 0.09
VPS33A-208ENST00000543633 MUM1L1Q5H9M0 696 aa15.6■□□□□ 0.09
VPS33A-208ENST00000543633 SPECC1Q5M775 1068 aa15.6■□□□□ 0.09
VPS33A-208ENST00000543633 PARD6BQ9BYG5 372 aa15.6■□□□□ 0.09
VPS33A-208ENST00000543633 ARMT1Q9H993 441 aa15.6■□□□□ 0.09
VPS33A-208ENST00000543633 SAMSN1Q9NSI8 373 aaKnown RBP15.6■□□□□ 0.09
VPS33A-208ENST00000543633 PSD3Q9NYI0 1048 aa15.6■□□□□ 0.09
VPS33A-208ENST00000543633 MYO1AQ9UBC5 1043 aa15.6■□□□□ 0.09
VPS33A-208ENST00000543633 CDC23Q9UJX2 597 aa15.6■□□□□ 0.09
VPS33A-208ENST00000543633 SEC31AO94979 1220 aaKnown RBP15.6■□□□□ 0.09
VPS33A-208ENST00000543633 GPTP24298 496 aa15.6■□□□□ 0.09
VPS33A-208ENST00000543633 USP5P45974 858 aa15.6■□□□□ 0.09
VPS33A-208ENST00000543633 VPS72Q15906 364 aa15.6■□□□□ 0.09
VPS33A-208ENST00000543633 SYNE4Q8N205 404 aa15.6■□□□□ 0.09
VPS33A-208ENST00000543633 MSANTD4Q8NCY6 345 aa15.6■□□□□ 0.09
VPS33A-208ENST00000543633 UBAC1Q9BSL1 405 aa15.6■□□□□ 0.09
VPS33A-208ENST00000543633 FUT8Q9BYC5 575 aa15.6■□□□□ 0.09
VPS33A-208ENST00000543633 MYH13Q9UKX3 1938 aa15.59■□□□□ 0.09
VPS33A-208ENST00000543633 UBE2Q2LH0YL09 131 aa15.59■□□□□ 0.09
VPS33A-208ENST00000543633 SASH3O75995 380 aa15.59■□□□□ 0.09
VPS33A-208ENST00000543633 PCP11498 1178 aaKnown RBP15.59■□□□□ 0.09
VPS33A-208ENST00000543633 OAS2P29728 719 aaKnown RBP15.59■□□□□ 0.09
VPS33A-208ENST00000543633 KRT2P35908 639 aa15.59■□□□□ 0.09
VPS33A-208ENST00000543633 CHMP4BP1P59074 171 aa15.59■□□□□ 0.09
VPS33A-208ENST00000543633 AKAP17AQ02040 695 aaKnown RBP15.59■□□□□ 0.09
VPS33A-208ENST00000543633 SPAG1Q07617 926 aa15.59■□□□□ 0.09
VPS33A-208ENST00000543633 DPYDQ12882 1025 aa15.59■□□□□ 0.09
VPS33A-208ENST00000543633 NR5A1Q13285 461 aa15.59■□□□□ 0.09
VPS33A-208ENST00000543633 SMC1AQ14683 1233 aaKnown RBP15.59■□□□□ 0.09
VPS33A-208ENST00000543633 SEC23AQ15436 765 aa15.59■□□□□ 0.09
VPS33A-208ENST00000543633 ZNF827Q17R98 1081 aa15.59■□□□□ 0.09
VPS33A-208ENST00000543633 TMED8Q6PL24 325 aaPredicted RBP15.59■□□□□ 0.09
VPS33A-208ENST00000543633 FAM177A1Q8N128 213 aaPredicted RBP15.59■□□□□ 0.09
VPS33A-208ENST00000543633 IGSF22Q8N9C0 903 aa15.59■□□□□ 0.09
VPS33A-208ENST00000543633 PIGBQ92521 554 aa15.59■□□□□ 0.09
VPS33A-208ENST00000543633 PHF20Q9BVI0 1012 aa15.59■□□□□ 0.09
VPS33A-208ENST00000543633 MRPL44Q9H9J2 332 aaKnown RBP15.59■□□□□ 0.09
VPS33A-208ENST00000543633 RBM28Q9NW13 759 aaKnown RBP15.59■□□□□ 0.09
VPS33A-208ENST00000543633 RAB21Q9UL25 225 aa15.59■□□□□ 0.09
VPS33A-208ENST00000543633 ASAP1Q9ULH1 1129 aa15.59■□□□□ 0.09
VPS33A-208ENST00000543633 SLC4A4Q9Y6R1 1079 aa15.59■□□□□ 0.09
VPS33A-208ENST00000543633 BCL9O00512 1426 aa15.59■□□□□ 0.09
VPS33A-208ENST00000543633 MAP2K7O14733 419 aa15.58■□□□□ 0.09
VPS33A-208ENST00000543633 CYP19A1P11511 503 aaPredicted RBP15.58■□□□□ 0.09
VPS33A-208ENST00000543633 ZNF34Q8IZ26 560 aa15.58■□□□□ 0.09
VPS33A-208ENST00000543633 TSPYL1Q9H0U9 437 aa15.58■□□□□ 0.09
VPS33A-208ENST00000543633 BRMS1Q9HCU9 246 aa15.58■□□□□ 0.09
VPS33A-208ENST00000543633 PRPF3O43395 683 aaKnown RBP15.58■□□□□ 0.08
VPS33A-208ENST00000543633 CALM1P0DP23 149 aa15.58■□□□□ 0.08
VPS33A-208ENST00000543633 CALM2P0DP24 149 aa15.58■□□□□ 0.08
VPS33A-208ENST00000543633 CALM3P0DP25 149 aa15.58■□□□□ 0.08
VPS33A-208ENST00000543633 GRAMD1CQ8IYS0 662 aa15.58■□□□□ 0.08
VPS33A-208ENST00000543633 LCORLQ8N3X6 602 aa15.58■□□□□ 0.08
VPS33A-208ENST00000543633 ESR2Q92731 530 aa15.58■□□□□ 0.08
VPS33A-208ENST00000543633 PAGE5Q96GU1 130 aa15.58■□□□□ 0.08
VPS33A-208ENST00000543633 CICQ96RK0 1608 aaPredicted RBP15.58■□□□□ 0.08
VPS33A-208ENST00000543633 A0A1B0GUL6 1792 aa15.58■□□□□ 0.08
VPS33A-208ENST00000543633 SOWAHDA6NJG2 315 aa15.57■□□□□ 0.08
VPS33A-208ENST00000543633 ERLIN1O75477 346 aa15.57■□□□□ 0.08
VPS33A-208ENST00000543633 IL6STP40189 918 aaPredicted RBP15.57■□□□□ 0.08
VPS33A-208ENST00000543633 PPARAQ07869 468 aa15.57■□□□□ 0.08
VPS33A-208ENST00000543633 KARSQ15046 597 aaKnown RBP15.57■□□□□ 0.08
VPS33A-208ENST00000543633 DDB1Q16531 1140 aa15.57■□□□□ 0.08
VPS33A-208ENST00000543633 LONRF2Q1L5Z9 754 aa15.57■□□□□ 0.08
VPS33A-208ENST00000543633 RAD9BQ6WBX8 426 aa15.57■□□□□ 0.08
VPS33A-208ENST00000543633 TMTC1Q8IUR5 882 aa15.57■□□□□ 0.08
VPS33A-208ENST00000543633 EXOC4Q96A65 974 aa15.57■□□□□ 0.08
VPS33A-208ENST00000543633 DESI2Q9BSY9 194 aa15.57■□□□□ 0.08
VPS33A-208ENST00000543633 CABP5Q9NP86 173 aa15.57■□□□□ 0.08
VPS33A-208ENST00000543633 INCENPQ9NQS7 918 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms