RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 DDR1Q08345 913 aa12.73□□□□□ -0.37
CDH4-201ENST00000543233 STX1AQ16623 288 aa12.73□□□□□ -0.37
CDH4-201ENST00000543233 RALYLQ86SE5 291 aaKnown RBP12.73□□□□□ -0.37
CDH4-201ENST00000543233 NSUN7Q8NE18 718 aaKnown RBP12.73□□□□□ -0.37
CDH4-201ENST00000543233 YIPF3Q9GZM5 350 aa12.73□□□□□ -0.37
CDH4-201ENST00000543233 SEC31BQ9NQW1 1179 aa12.73□□□□□ -0.37
CDH4-201ENST00000543233 ARFGEF2Q9Y6D5 1785 aa12.73□□□□□ -0.37
CDH4-201ENST00000543233 FANCGO15287 622 aa12.73□□□□□ -0.37
CDH4-201ENST00000543233 CYP19A1P11511 503 aaPredicted RBP12.73□□□□□ -0.37
CDH4-201ENST00000543233 PECAM1P16284 738 aaPredicted RBP12.73□□□□□ -0.37
CDH4-201ENST00000543233 MRPL12P52815 198 aaKnown RBP12.73□□□□□ -0.37
CDH4-201ENST00000543233 IQCB1Q15051 598 aa12.73□□□□□ -0.37
CDH4-201ENST00000543233 DNAJC14Q6Y2X3 702 aaPredicted RBP12.73□□□□□ -0.37
CDH4-201ENST00000543233 RIN2Q8WYP3 895 aaPredicted RBP12.73□□□□□ -0.37
CDH4-201ENST00000543233 PGBD1Q96JS3 809 aa12.73□□□□□ -0.37
CDH4-201ENST00000543233 WDR24Q96S15 920 aa12.73□□□□□ -0.37
CDH4-201ENST00000543233 TMEM165Q9HC07 324 aa12.73□□□□□ -0.37
CDH4-201ENST00000543233 CHCHD3Q9NX63 227 aaKnown RBP12.73□□□□□ -0.37
CDH4-201ENST00000543233 ADAMTS7Q9UKP4 1686 aa12.72□□□□□ -0.37
CDH4-201ENST00000543233 KLF18A0A0U1RQI7 1052 aa12.72□□□□□ -0.37
CDH4-201ENST00000543233 ABCD1P33897 745 aa12.72□□□□□ -0.37
CDH4-201ENST00000543233 CTSWP56202 376 aa12.72□□□□□ -0.37
CDH4-201ENST00000543233 GOLGA8FQ08AF8 430 aa12.72□□□□□ -0.37
CDH4-201ENST00000543233 GOLGA8DPQ0D2H9 430 aa12.72□□□□□ -0.37
CDH4-201ENST00000543233 USP4Q13107 963 aa12.72□□□□□ -0.37
CDH4-201ENST00000543233 IMMTQ16891 758 aaKnown RBP12.72□□□□□ -0.37
CDH4-201ENST00000543233 THEMIS2Q5TEJ8 643 aa12.72□□□□□ -0.37
CDH4-201ENST00000543233 BICDL1Q6ZP65 573 aa12.72□□□□□ -0.37
CDH4-201ENST00000543233 GDAP1L1Q96MZ0 367 aa12.72□□□□□ -0.37
CDH4-201ENST00000543233 DSCC1Q9BVC3 393 aa12.72□□□□□ -0.37
CDH4-201ENST00000543233 XPO4Q9C0E2 1151 aaKnown RBP12.72□□□□□ -0.37
CDH4-201ENST00000543233 SCAND2PQ9GZW5 306 aaPredicted RBP12.72□□□□□ -0.37
CDH4-201ENST00000543233 GOLGA8BA8MQT2 603 aa12.72□□□□□ -0.37
CDH4-201ENST00000543233 PRC1O43663 620 aa12.72□□□□□ -0.37
CDH4-201ENST00000543233 RTN2O75298 545 aa12.72□□□□□ -0.37
CDH4-201ENST00000543233 CIAO1O76071 339 aa12.72□□□□□ -0.37
CDH4-201ENST00000543233 MFSD4BQ5TF39 518 aa12.72□□□□□ -0.37
CDH4-201ENST00000543233 TRIM65Q6PJ69 517 aa12.72□□□□□ -0.37
CDH4-201ENST00000543233 RSRC2Q7L4I2 434 aaKnown RBP12.72□□□□□ -0.37
CDH4-201ENST00000543233 RSRC1Q96IZ7 334 aaKnown RBP12.72□□□□□ -0.37
CDH4-201ENST00000543233 PNKPQ96T60 521 aa12.72□□□□□ -0.37
CDH4-201ENST00000543233 TEX13AQ9BXU3 409 aaPredicted RBP12.72□□□□□ -0.37
CDH4-201ENST00000543233 KAT14Q9H8E8 782 aa12.72□□□□□ -0.37
CDH4-201ENST00000543233 GPR108Q9NPR9 543 aa12.72□□□□□ -0.37
CDH4-201ENST00000543233 KCPQ6ZWJ8 1503 aa12.71□□□□□ -0.37
CDH4-201ENST00000543233 CPLX1O14810 134 aa12.71□□□□□ -0.37
CDH4-201ENST00000543233 SETSIPP0DME0 302 aa12.71□□□□□ -0.37
CDH4-201ENST00000543233 PDHBP11177 359 aa12.71□□□□□ -0.37
CDH4-201ENST00000543233 POLD1P28340 1107 aa12.71□□□□□ -0.37
CDH4-201ENST00000543233 PDIA3P30101 505 aaKnown RBP12.71□□□□□ -0.37
CDH4-201ENST00000543233 KARSQ15046 597 aaKnown RBP12.71□□□□□ -0.37
CDH4-201ENST00000543233 IGSF22Q8N9C0 903 aa12.71□□□□□ -0.37
CDH4-201ENST00000543233 ZNF213O14771 459 aa12.71□□□□□ -0.37
CDH4-201ENST00000543233 ME1P48163 572 aa12.71□□□□□ -0.37
CDH4-201ENST00000543233 TBC1D25Q3MII6 688 aa12.71□□□□□ -0.37
CDH4-201ENST00000543233 RRP12Q5JTH9 1297 aaKnown RBP12.71□□□□□ -0.37
CDH4-201ENST00000543233 CEP57L1Q8IYX8 460 aa12.71□□□□□ -0.37
CDH4-201ENST00000543233 NKX2-3Q8TAU0 364 aa12.71□□□□□ -0.37
CDH4-201ENST00000543233 PIH1D3Q9NQM4 214 aaKnown RBP12.71□□□□□ -0.37
CDH4-201ENST00000543233 DDX20Q9UHI6 824 aaKnown RBP12.71□□□□□ -0.37
CDH4-201ENST00000543233 WWC3Q9ULE0 1092 aa12.71□□□□□ -0.37
CDH4-201ENST00000543233 CRYBG1Q9Y4K1 1723 aa12.71□□□□□ -0.38
CDH4-201ENST00000543233 PFKFB2O60825 505 aa12.71□□□□□ -0.38
CDH4-201ENST00000543233 RESTQ13127 1097 aa12.71□□□□□ -0.38
CDH4-201ENST00000543233 HHATQ5VTY9 493 aa12.71□□□□□ -0.38
CDH4-201ENST00000543233 USP28Q96RU2 1077 aa12.71□□□□□ -0.38
CDH4-201ENST00000543233 MPHOSPH8Q99549 860 aa12.71□□□□□ -0.38
CDH4-201ENST00000543233 MYL10Q9BUA6 226 aa12.71□□□□□ -0.38
CDH4-201ENST00000543233 SRCAPQ6ZRS2 3230 aa12.7□□□□□ -0.38
CDH4-201ENST00000543233 NDUFAB1O14561 156 aa12.7□□□□□ -0.38
CDH4-201ENST00000543233 FOXP2O15409 715 aa12.7□□□□□ -0.38
CDH4-201ENST00000543233 ZSCAN12O43309 604 aa12.7□□□□□ -0.38
CDH4-201ENST00000543233 ICA1Q05084 483 aa12.7□□□□□ -0.38
CDH4-201ENST00000543233 SNCBQ16143 134 aa12.7□□□□□ -0.38
CDH4-201ENST00000543233 ANKRD23Q86SG2 305 aa12.7□□□□□ -0.38
CDH4-201ENST00000543233 CCDC24Q8N4L8 307 aa12.7□□□□□ -0.38
CDH4-201ENST00000543233 CCDC82Q8N4S0 544 aa12.7□□□□□ -0.38
CDH4-201ENST00000543233 FAM76AQ8TAV0 307 aa12.7□□□□□ -0.38
CDH4-201ENST00000543233 RMI1Q9H9A7 625 aa12.7□□□□□ -0.38
CDH4-201ENST00000543233 KCND1Q9NSA2 647 aa12.7□□□□□ -0.38
CDH4-201ENST00000543233 L1RE1Q9UN81 338 aa12.7□□□□□ -0.38
CDH4-201ENST00000543233 ZNF232Q9UNY5 417 aa12.7□□□□□ -0.38
CDH4-201ENST00000543233 RIPOR2Q9Y4F9 1068 aa12.7□□□□□ -0.38
CDH4-201ENST00000543233 UBN2Q6ZU65 1347 aa12.7□□□□□ -0.38
CDH4-201ENST00000543233 PALLDQ8WX93 1383 aa12.7□□□□□ -0.38
CDH4-201ENST00000543233 CAVIN2O95810 425 aa12.7□□□□□ -0.38
CDH4-201ENST00000543233 GNGT1P63211 74 aa12.7□□□□□ -0.38
CDH4-201ENST00000543233 PTPN21Q16825 1174 aa12.7□□□□□ -0.38
CDH4-201ENST00000543233 CCDC102BQ68D86 513 aa12.7□□□□□ -0.38
CDH4-201ENST00000543233 APPBP2Q92624 585 aa12.7□□□□□ -0.38
CDH4-201ENST00000543233 AIFM3Q96NN9 605 aa12.7□□□□□ -0.38
CDH4-201ENST00000543233 GBP3Q9H0R5 595 aa12.7□□□□□ -0.38
CDH4-201ENST00000543233 RAB27AP51159 221 aa12.69□□□□□ -0.38
CDH4-201ENST00000543233 EXOSC10Q01780 885 aaKnown RBP12.69□□□□□ -0.38
CDH4-201ENST00000543233 LMBR1Q8WVP7 490 aa12.69□□□□□ -0.38
CDH4-201ENST00000543233 OSBPL5Q9H0X9 879 aaPredicted RBP12.69□□□□□ -0.38
CDH4-201ENST00000543233 ZNF532Q9HCE3 1301 aa12.69□□□□□ -0.38
CDH4-201ENST00000543233 IMPACTQ9P2X3 320 aa12.69□□□□□ -0.38
CDH4-201ENST00000543233 WTIPA6NIX2 430 aaPredicted RBP12.69□□□□□ -0.38
CDH4-201ENST00000543233 LRRIQ3A6PVS8 624 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms