RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 GPSM2P81274 684 aa6.26□□□□□ -1.41
CLIP1-217ENST00000543205 ATP8B2P98198 1209 aa6.26□□□□□ -1.41
CLIP1-217ENST00000543205 FKBP4Q02790 459 aaKnown RBP eCLIP6.26□□□□□ -1.41
CLIP1-217ENST00000543205 USP17L24Q0WX57 530 aa6.26□□□□□ -1.41
CLIP1-217ENST00000543205 ZNF211Q13398 564 aaPredicted RBP6.26□□□□□ -1.41
CLIP1-217ENST00000543205 MTX1Q13505 466 aa6.26□□□□□ -1.41
CLIP1-217ENST00000543205 HSP90AB4PQ58FF6 505 aa6.26□□□□□ -1.41
CLIP1-217ENST00000543205 JAZF1Q86VZ6 243 aa6.26□□□□□ -1.41
CLIP1-217ENST00000543205 OGFOD1Q8N543 542 aa6.26□□□□□ -1.41
CLIP1-217ENST00000543205 SUPT20HQ8NEM7 779 aa6.26□□□□□ -1.41
CLIP1-217ENST00000543205 CRBNQ96SW2 442 aa6.26□□□□□ -1.41
CLIP1-217ENST00000543205 ANKRD2Q9GZV1 360 aa6.26□□□□□ -1.41
CLIP1-217ENST00000543205 OSBPL3Q9H4L5 887 aa6.26□□□□□ -1.41
CLIP1-217ENST00000543205 ANO2Q9NQ90 1003 aa6.26□□□□□ -1.41
CLIP1-217ENST00000543205 DNAAF2Q9NVR5 837 aaKnown RBP6.26□□□□□ -1.41
CLIP1-217ENST00000543205 GABBR1Q9UBS5 961 aa6.26□□□□□ -1.41
CLIP1-217ENST00000543205 MINPP1Q9UNW1 487 aa6.26□□□□□ -1.41
CLIP1-217ENST00000543205 FAN1Q9Y2M0 1017 aa6.26□□□□□ -1.41
CLIP1-217ENST00000543205 SLX4Q8IY92 1834 aa6.26□□□□□ -1.41
CLIP1-217ENST00000543205 MYH3P11055 1940 aa6.26□□□□□ -1.41
CLIP1-217ENST00000543205 BRCA1P38398 1863 aaKnown RBP6.26□□□□□ -1.41
CLIP1-217ENST00000543205 TERTO14746 1132 aaKnown RBP6.26□□□□□ -1.41
CLIP1-217ENST00000543205 RFX5P48382 616 aaPredicted RBP6.26□□□□□ -1.41
CLIP1-217ENST00000543205 RASSF7Q02833 373 aa6.26□□□□□ -1.41
CLIP1-217ENST00000543205 CHRNDQ07001 517 aa6.26□□□□□ -1.41
CLIP1-217ENST00000543205 CBLBQ13191 982 aa6.26□□□□□ -1.41
CLIP1-217ENST00000543205 FOXD4L6Q3SYB3 417 aaPredicted RBP6.26□□□□□ -1.41
CLIP1-217ENST00000543205 CCDC181Q5TID7 509 aa6.26□□□□□ -1.41
CLIP1-217ENST00000543205 FOXD4L3Q6VB84 417 aaPredicted RBP6.26□□□□□ -1.41
CLIP1-217ENST00000543205 CYP2U1Q7Z449 544 aa6.26□□□□□ -1.41
CLIP1-217ENST00000543205 SLC51AQ86UW1 340 aa6.26□□□□□ -1.41
CLIP1-217ENST00000543205 RPAP2Q8IXW5 612 aaPredicted RBP6.26□□□□□ -1.41
CLIP1-217ENST00000543205 KLHDC4Q8TBB5 520 aa6.26□□□□□ -1.41
CLIP1-217ENST00000543205 MORC4Q8TE76 937 aa6.26□□□□□ -1.41
CLIP1-217ENST00000543205 PMM1Q92871 262 aa6.26□□□□□ -1.41
CLIP1-217ENST00000543205 ZSWIM4Q9H7M6 989 aa6.26□□□□□ -1.41
CLIP1-217ENST00000543205 DMGDHQ9UI17 866 aaKnown RBP6.26□□□□□ -1.41
CLIP1-217ENST00000543205 GGA1Q9UJY5 639 aa6.26□□□□□ -1.41
CLIP1-217ENST00000543205 XDHP47989 1333 aa6.25□□□□□ -1.41
CLIP1-217ENST00000543205 MROH5Q6ZUA9 1318 aa6.25□□□□□ -1.41
CLIP1-217ENST00000543205 LTBP3Q9NS15 1303 aa6.25□□□□□ -1.41
CLIP1-217ENST00000543205 PNMA6EA0A0J9YXQ4 647 aa6.25□□□□□ -1.41
CLIP1-217ENST00000543205 FAM196BA6NMK8 535 aa6.25□□□□□ -1.41
CLIP1-217ENST00000543205 NFKBIEO00221 500 aa6.25□□□□□ -1.41
CLIP1-217ENST00000543205 HMMRO75330 724 aa6.25□□□□□ -1.41
CLIP1-217ENST00000543205 UFL1O94874 794 aa6.25□□□□□ -1.41
CLIP1-217ENST00000543205 LMNB1P20700 586 aa6.25□□□□□ -1.41
CLIP1-217ENST00000543205 ATP2B4P23634 1241 aa6.25□□□□□ -1.41
CLIP1-217ENST00000543205 KCNJ4P48050 445 aa6.25□□□□□ -1.41
CLIP1-217ENST00000543205 TNNI2P48788 182 aa6.25□□□□□ -1.41
CLIP1-217ENST00000543205 CLDN10P78369 228 aa6.25□□□□□ -1.41
CLIP1-217ENST00000543205 PTPN12Q05209 780 aaKnown RBP6.25□□□□□ -1.41
CLIP1-217ENST00000543205 METTL24Q5JXM2 366 aa6.25□□□□□ -1.41
CLIP1-217ENST00000543205 CEP85Q6P2H3 762 aa6.25□□□□□ -1.41
CLIP1-217ENST00000543205 EYA3Q99504 573 aa6.25□□□□□ -1.41
CLIP1-217ENST00000543205 KLF16Q9BXK1 252 aaPredicted RBP6.25□□□□□ -1.41
CLIP1-217ENST00000543205 PUS3Q9BZE2 481 aaKnown RBP6.25□□□□□ -1.41
CLIP1-217ENST00000543205 SIL1Q9H173 461 aa6.25□□□□□ -1.41
CLIP1-217ENST00000543205 ZNF277Q9NRM2 450 aaPredicted RBP6.25□□□□□ -1.41
CLIP1-217ENST00000543205 PA2G4Q9UQ80 394 aaKnown RBP6.25□□□□□ -1.41
CLIP1-217ENST00000543205 GOLGB1Q14789 3259 aaKnown RBP6.25□□□□□ -1.41
CLIP1-217ENST00000543205 ARFGEF1Q9Y6D6 1849 aa6.25□□□□□ -1.41
CLIP1-217ENST00000543205 EYA2O00167 538 aa6.25□□□□□ -1.41
CLIP1-217ENST00000543205 TAF5LO75529 589 aa6.25□□□□□ -1.41
CLIP1-217ENST00000543205 CIAO1O76071 339 aa6.25□□□□□ -1.41
CLIP1-217ENST00000543205 ATP2B1P20020 1258 aa6.25□□□□□ -1.41
CLIP1-217ENST00000543205 MAPK1P28482 360 aa6.25□□□□□ -1.41
CLIP1-217ENST00000543205 ADD1P35611 737 aaKnown RBP6.25□□□□□ -1.41
CLIP1-217ENST00000543205 SMCPP49901 116 aaPredicted RBP6.25□□□□□ -1.41
CLIP1-217ENST00000543205 ANAPC15P60006 121 aa6.25□□□□□ -1.41
CLIP1-217ENST00000543205 G3BP1Q13283 466 aaKnown RBP eCLIP6.25□□□□□ -1.41
CLIP1-217ENST00000543205 OS9Q13438 667 aaPredicted RBP6.25□□□□□ -1.41
CLIP1-217ENST00000543205 LRRC24Q50LG9 513 aa6.25□□□□□ -1.41
CLIP1-217ENST00000543205 SPTY2D1Q68D10 685 aaPredicted RBP6.25□□□□□ -1.41
CLIP1-217ENST00000543205 TBC1D16Q8TBP0 767 aa6.25□□□□□ -1.41
CLIP1-217ENST00000543205 SSH3Q8TE77 659 aa6.25□□□□□ -1.41
CLIP1-217ENST00000543205 CLP1Q92989 425 aaKnown RBP6.25□□□□□ -1.41
CLIP1-217ENST00000543205 RTFDC1Q9BY42 306 aaPredicted RBP6.25□□□□□ -1.41
CLIP1-217ENST00000543205 VPS33BQ9H267 617 aa6.25□□□□□ -1.41
CLIP1-217ENST00000543205 COPRSQ9NQ92 184 aa6.25□□□□□ -1.41
CLIP1-217ENST00000543205 RNF181Q9P0P0 153 aa6.25□□□□□ -1.41
CLIP1-217ENST00000543205 GMPR2Q9P2T1 348 aaKnown RBP6.25□□□□□ -1.41
CLIP1-217ENST00000543205 POLLQ9UGP5 575 aa6.25□□□□□ -1.41
CLIP1-217ENST00000543205 KIAA1024Q9UPX6 916 aa6.25□□□□□ -1.41
CLIP1-217ENST00000543205 LEMD3Q9Y2U8 911 aa6.25□□□□□ -1.41
CLIP1-217ENST00000543205 RBM19Q9Y4C8 960 aaKnown RBP6.25□□□□□ -1.41
CLIP1-217ENST00000543205 CACNA1SQ13698 1873 aa6.24□□□□□ -1.41
CLIP1-217ENST00000543205 COL4A1P02462 1669 aa6.24□□□□□ -1.41
CLIP1-217ENST00000543205 H3BRB1 525 aa6.24□□□□□ -1.41
CLIP1-217ENST00000543205 CAPN5O15484 640 aaPredicted RBP6.24□□□□□ -1.41
CLIP1-217ENST00000543205 PPIP5K2O43314 1243 aa6.24□□□□□ -1.41
CLIP1-217ENST00000543205 SURF6O75683 361 aaKnown RBP6.24□□□□□ -1.41
CLIP1-217ENST00000543205 ADH1AP07327 375 aa6.24□□□□□ -1.41
CLIP1-217ENST00000543205 IL15P40933 162 aaPredicted RBP6.24□□□□□ -1.41
CLIP1-217ENST00000543205 IARSP41252 1262 aaKnown RBP6.24□□□□□ -1.41
CLIP1-217ENST00000543205 FGD1P98174 961 aa6.24□□□□□ -1.41
CLIP1-217ENST00000543205 PTK7Q13308 1070 aa6.24□□□□□ -1.41
CLIP1-217ENST00000543205 AAMPQ13685 434 aa6.24□□□□□ -1.41
CLIP1-217ENST00000543205 TPCN2Q8NHX9 752 aa6.24□□□□□ -1.41
CLIP1-217ENST00000543205 EXOC6Q8TAG9 804 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms