RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 HSP90AA4PQ58FG1 418 aa18.96■□□□□ 0.63
KDM2B-216ENST00000543025 SMIM5Q71RC9 77 aa18.96■□□□□ 0.63
KDM2B-216ENST00000543025 AMIGO3Q86WK7 504 aa18.96■□□□□ 0.63
KDM2B-216ENST00000543025 UBXN4Q92575 508 aa18.96■□□□□ 0.63
KDM2B-216ENST00000543025 VWA3AA6NCI4 1184 aa18.95■□□□□ 0.62
KDM2B-216ENST00000543025 EN1Q05925 392 aaPredicted RBP18.95■□□□□ 0.62
KDM2B-216ENST00000543025 ZNF654Q8IZM8 581 aa18.95■□□□□ 0.62
KDM2B-216ENST00000543025 FANCBQ8NB91 859 aa18.95■□□□□ 0.62
KDM2B-216ENST00000543025 MNS1Q8NEH6 495 aa18.95■□□□□ 0.62
KDM2B-216ENST00000543025 SCN7AQ01118 1682 aa18.95■□□□□ 0.62
KDM2B-216ENST00000543025 RPS6KA4O75676 772 aa18.95■□□□□ 0.62
KDM2B-216ENST00000543025 URI1O94763 535 aaPredicted RBP18.95■□□□□ 0.62
KDM2B-216ENST00000543025 SLFN14P0C7P3 912 aa18.95■□□□□ 0.62
KDM2B-216ENST00000543025 CLCN6P51797 869 aa18.95■□□□□ 0.62
KDM2B-216ENST00000543025 CMTR1Q8N1G2 835 aaKnown RBP18.95■□□□□ 0.62
KDM2B-216ENST00000543025 NUP133Q8WUM0 1156 aa18.95■□□□□ 0.62
KDM2B-216ENST00000543025 FANCGO15287 622 aa18.94■□□□□ 0.62
KDM2B-216ENST00000543025 SF3B2Q13435 895 aaKnown RBP18.94■□□□□ 0.62
KDM2B-216ENST00000543025 EZH2Q15910 746 aaKnown RBP18.94■□□□□ 0.62
KDM2B-216ENST00000543025 PDILTQ8N807 584 aa18.94■□□□□ 0.62
KDM2B-216ENST00000543025 CAMKK2Q96RR4 588 aa18.94■□□□□ 0.62
KDM2B-216ENST00000543025 UBAC1Q9BSL1 405 aa18.94■□□□□ 0.62
KDM2B-216ENST00000543025 ARGLU1Q9NWB6 273 aaPredicted RBP18.94■□□□□ 0.62
KDM2B-216ENST00000543025 PARP3Q9Y6F1 533 aa18.94■□□□□ 0.62
KDM2B-216ENST00000543025 ACTN4O43707 911 aaKnown RBP18.94■□□□□ 0.62
KDM2B-216ENST00000543025 TERF2Q15554 542 aa18.94■□□□□ 0.62
KDM2B-216ENST00000543025 ZNF827Q17R98 1081 aa18.94■□□□□ 0.62
KDM2B-216ENST00000543025 TC2NQ8N9U0 490 aa18.94■□□□□ 0.62
KDM2B-216ENST00000543025 EFCAB8A8MWE9 144 aa18.93■□□□□ 0.62
KDM2B-216ENST00000543025 PPARAQ07869 468 aa18.93■□□□□ 0.62
KDM2B-216ENST00000543025 TRMT44Q8IYL2 757 aaKnown RBP18.93■□□□□ 0.62
KDM2B-216ENST00000543025 SPATA20Q8TB22 786 aa18.93■□□□□ 0.62
KDM2B-216ENST00000543025 CCDC34Q96HJ3 373 aa18.93■□□□□ 0.62
KDM2B-216ENST00000543025 RNF26Q9BY78 433 aaPredicted RBP18.93■□□□□ 0.62
KDM2B-216ENST00000543025 CABP5Q9NP86 173 aa18.93■□□□□ 0.62
KDM2B-216ENST00000543025 RTCBQ9Y3I0 505 aaKnown RBP18.93■□□□□ 0.62
KDM2B-216ENST00000543025 BCAMP50895 628 aa18.93■□□□□ 0.62
KDM2B-216ENST00000543025 PPP2R5BQ15173 497 aa18.93■□□□□ 0.62
KDM2B-216ENST00000543025 MIGA1Q8NAN2 632 aa18.93■□□□□ 0.62
KDM2B-216ENST00000543025 OXER1Q8TDS5 423 aa18.93■□□□□ 0.62
KDM2B-216ENST00000543025 CSRNP2Q9H175 543 aa18.93■□□□□ 0.62
KDM2B-216ENST00000543025 SEC31BQ9NQW1 1179 aa18.93■□□□□ 0.62
KDM2B-216ENST00000543025 LRP2BPQ9P2M1 347 aa18.93■□□□□ 0.62
KDM2B-216ENST00000543025 XBP1P17861 261 aa18.92■□□□□ 0.62
KDM2B-216ENST00000543025 ERCC5P28715 1186 aaPredicted RBP18.92■□□□□ 0.62
KDM2B-216ENST00000543025 PLCD1P51178 756 aa18.92■□□□□ 0.62
KDM2B-216ENST00000543025 SUSD4Q5VX71 490 aa18.92■□□□□ 0.62
KDM2B-216ENST00000543025 GRAMD1CQ8IYS0 662 aa18.92■□□□□ 0.62
KDM2B-216ENST00000543025 TADA3O75528 432 aa18.92■□□□□ 0.62
KDM2B-216ENST00000543025 TPM1P09493 284 aa18.92■□□□□ 0.62
KDM2B-216ENST00000543025 ATP2B1P20020 1258 aa18.92■□□□□ 0.62
KDM2B-216ENST00000543025 BAG6P46379 1132 aa18.92■□□□□ 0.62
KDM2B-216ENST00000543025 ADKP55263 362 aaKnown RBP18.92■□□□□ 0.62
KDM2B-216ENST00000543025 DEFB132Q7Z7B7 95 aa18.92■□□□□ 0.62
KDM2B-216ENST00000543025 RAI14Q9P0K7 980 aa18.92■□□□□ 0.62
KDM2B-216ENST00000543025 RTL9Q8NET4 1388 aa18.91■□□□□ 0.62
KDM2B-216ENST00000543025 AKAP17AQ02040 695 aaKnown RBP18.91■□□□□ 0.62
KDM2B-216ENST00000543025 FAM177A1Q8N128 213 aaPredicted RBP18.91■□□□□ 0.62
KDM2B-216ENST00000543025 ESR2Q92731 530 aa18.91■□□□□ 0.62
KDM2B-216ENST00000543025 CARD6Q9BX69 1037 aa18.91■□□□□ 0.62
KDM2B-216ENST00000543025 TNKSO95271 1327 aa18.91■□□□□ 0.62
KDM2B-216ENST00000543025 CAMTA2O94983 1202 aa18.91■□□□□ 0.62
KDM2B-216ENST00000543025 CASQ1P31415 396 aa18.91■□□□□ 0.62
KDM2B-216ENST00000543025 IGHMBP2P38935 993 aaKnown RBP18.91■□□□□ 0.62
KDM2B-216ENST00000543025 CT47A1Q5JQC4 288 aaPredicted RBP18.91■□□□□ 0.62
KDM2B-216ENST00000543025 MED15Q96RN5 788 aa18.91■□□□□ 0.62
KDM2B-216ENST00000543025 SAMSN1Q9NSI8 373 aaKnown RBP18.91■□□□□ 0.62
KDM2B-216ENST00000543025 AATFQ9NY61 560 aaKnown RBP eCLIP18.91■□□□□ 0.62
KDM2B-216ENST00000543025 FHOD1Q9Y613 1164 aa18.91■□□□□ 0.62
KDM2B-216ENST00000543025 NR1I3Q14994 352 aa18.9■□□□□ 0.62
KDM2B-216ENST00000543025 CCDC152Q4G0S7 254 aa18.9■□□□□ 0.62
KDM2B-216ENST00000543025 USP49Q70CQ1 688 aa18.9■□□□□ 0.62
KDM2B-216ENST00000543025 TRIM75PA6NK02 468 aa18.9■□□□□ 0.62
KDM2B-216ENST00000543025 GNG11P61952 73 aa18.9■□□□□ 0.62
KDM2B-216ENST00000543025 SEC23AQ15436 765 aa18.9■□□□□ 0.62
KDM2B-216ENST00000543025 TMCO3Q6UWJ1 677 aa18.9■□□□□ 0.62
KDM2B-216ENST00000543025 TOGARAM2Q6ZUX3 1019 aa18.9■□□□□ 0.62
KDM2B-216ENST00000543025 ANAPC4Q9UJX5 808 aa18.9■□□□□ 0.62
KDM2B-216ENST00000543025 A0A1B0GTH6 734 aa18.89■□□□□ 0.61
KDM2B-216ENST00000543025 HMGB2P26583 209 aaKnown RBP18.89■□□□□ 0.61
KDM2B-216ENST00000543025 AKT1S1Q96B36 256 aa18.89■□□□□ 0.61
KDM2B-216ENST00000543025 MINDY4BA8MYZ0 360 aa18.89■□□□□ 0.61
KDM2B-216ENST00000543025 CYP7A1P22680 504 aa18.89■□□□□ 0.61
KDM2B-216ENST00000543025 FAM193AP78312 1265 aa18.89■□□□□ 0.61
KDM2B-216ENST00000543025 MAP3K9P80192 1104 aa18.89■□□□□ 0.61
KDM2B-216ENST00000543025 CCDC125Q86Z20 511 aa18.89■□□□□ 0.61
KDM2B-216ENST00000543025 SDR42E1Q8WUS8 393 aa18.89■□□□□ 0.61
KDM2B-216ENST00000543025 ARHGEF1Q92888 912 aaKnown RBP18.89■□□□□ 0.61
KDM2B-216ENST00000543025 DHX58Q96C10 678 aa18.89■□□□□ 0.61
KDM2B-216ENST00000543025 ZRANB2O95218 330 aaKnown RBP eCLIP18.88■□□□□ 0.61
KDM2B-216ENST00000543025 PNMA6AP0CW24 399 aaPredicted RBP18.88■□□□□ 0.61
KDM2B-216ENST00000543025 KRT2P35908 639 aa18.88■□□□□ 0.61
KDM2B-216ENST00000543025 WDR24Q96S15 920 aa18.88■□□□□ 0.61
KDM2B-216ENST00000543025 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.88■□□□□ 0.61
KDM2B-216ENST00000543025 PHF20Q9BVI0 1012 aa18.88■□□□□ 0.61
KDM2B-216ENST00000543025 VPS54Q9P1Q0 977 aa18.88■□□□□ 0.61
KDM2B-216ENST00000543025 MYH6P13533 1939 aa18.87■□□□□ 0.61
KDM2B-216ENST00000543025 CHRNDQ07001 517 aa18.87■□□□□ 0.61
KDM2B-216ENST00000543025 PARP10Q53GL7 1025 aa18.87■□□□□ 0.61
KDM2B-216ENST00000543025 TRAPPC3LQ5T215 181 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms