RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 TTC6Q86TZ1 520 aa24.12■■□□□ 1.45
DDX11-220ENST00000542244 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.12■■□□□ 1.45
DDX11-220ENST00000542244 C12orf42Q96LP6 360 aa24.12■■□□□ 1.45
DDX11-220ENST00000542244 NAV1Q8NEY1 1877 aa24.11■■□□□ 1.45
DDX11-220ENST00000542244 A0A1W2PRG0 241 aa24.11■■□□□ 1.45
DDX11-220ENST00000542244 HMGCRP04035 888 aa24.11■■□□□ 1.45
DDX11-220ENST00000542244 POLR3DP05423 398 aaPredicted RBP24.11■■□□□ 1.45
DDX11-220ENST00000542244 MS4A1P11836 297 aa24.11■■□□□ 1.45
DDX11-220ENST00000542244 MNX1P50219 401 aaPredicted RBP24.11■■□□□ 1.45
DDX11-220ENST00000542244 ERVK-9P63128 1117 aa24.11■■□□□ 1.45
DDX11-220ENST00000542244 ERVK-24P63145 666 aa24.11■■□□□ 1.45
DDX11-220ENST00000542244 TTF1Q15361 905 aaPredicted RBP24.11■■□□□ 1.45
DDX11-220ENST00000542244 CCL14Q16627 93 aa24.11■■□□□ 1.45
DDX11-220ENST00000542244 USP6NLQ92738 828 aa24.11■■□□□ 1.45
DDX11-220ENST00000542244 DYNLL2Q96FJ2 89 aa24.11■■□□□ 1.45
DDX11-220ENST00000542244 PAWRQ96IZ0 340 aaKnown RBP24.11■■□□□ 1.45
DDX11-220ENST00000542244 DCP1AQ9NPI6 582 aaPredicted RBP24.11■■□□□ 1.45
DDX11-220ENST00000542244 MCM9Q9NXL9 1143 aa24.11■■□□□ 1.45
DDX11-220ENST00000542244 CYP2D7A0A087X1C5 515 aa24.1■■□□□ 1.45
DDX11-220ENST00000542244 KIAA1755Q5JYT7 1200 aa24.1■■□□□ 1.45
DDX11-220ENST00000542244 CLEC10AQ8IUN9 316 aa24.1■■□□□ 1.45
DDX11-220ENST00000542244 FEZ1Q99689 392 aa24.1■■□□□ 1.45
DDX11-220ENST00000542244 RBM27Q9P2N5 1060 aaKnown RBP24.1■■□□□ 1.45
DDX11-220ENST00000542244 RAB11FIP3O75154 756 aa24.09■■□□□ 1.45
DDX11-220ENST00000542244 HMMRO75330 724 aa24.09■■□□□ 1.45
DDX11-220ENST00000542244 VCAM1P19320 739 aa24.09■■□□□ 1.45
DDX11-220ENST00000542244 CATSPERGQ6ZRH7 1159 aa24.09■■□□□ 1.45
DDX11-220ENST00000542244 GPR142Q7Z601 462 aa24.09■■□□□ 1.45
DDX11-220ENST00000542244 CERS3Q8IU89 383 aa24.09■■□□□ 1.45
DDX11-220ENST00000542244 CRNKL1Q9BZJ0 848 aaKnown RBP24.09■■□□□ 1.45
DDX11-220ENST00000542244 KIAA1683Q9H0B3 1180 aa24.09■■□□□ 1.45
DDX11-220ENST00000542244 PAG1Q9NWQ8 432 aa24.09■■□□□ 1.45
DDX11-220ENST00000542244 BTBD7Q9P203 1132 aa24.09■■□□□ 1.45
DDX11-220ENST00000542244 ATP5JP18859 108 aa24.08■■□□□ 1.45
DDX11-220ENST00000542244 ADD2P35612 726 aa24.08■■□□□ 1.45
DDX11-220ENST00000542244 MORN1Q5T089 497 aa24.08■■□□□ 1.45
DDX11-220ENST00000542244 USP17L15C9J2P7 530 aa24.07■■□□□ 1.44
DDX11-220ENST00000542244 USP17L13C9JLJ4 530 aa24.07■■□□□ 1.44
DDX11-220ENST00000542244 USP17L11C9JVI0 530 aa24.07■■□□□ 1.44
DDX11-220ENST00000542244 USP17L18D6R9N7 530 aa24.07■■□□□ 1.44
DDX11-220ENST00000542244 USP17L22D6RA61 530 aa24.07■■□□□ 1.44
DDX11-220ENST00000542244 USP17L17D6RBQ6 530 aa24.07■■□□□ 1.44
DDX11-220ENST00000542244 USP17L19D6RCP7 530 aa24.07■■□□□ 1.44
DDX11-220ENST00000542244 USP17L20D6RJB6 530 aa24.07■■□□□ 1.44
DDX11-220ENST00000542244 MBD4O95243 580 aa24.07■■□□□ 1.44
DDX11-220ENST00000542244 USP17L24Q0WX57 530 aa24.07■■□□□ 1.44
DDX11-220ENST00000542244 MAP3K21Q5TCX8 1036 aa24.07■■□□□ 1.44
DDX11-220ENST00000542244 HTATIP2Q9BUP3 242 aa24.07■■□□□ 1.44
DDX11-220ENST00000542244 PRO3102Q9H379 93 aa24.07■■□□□ 1.44
DDX11-220ENST00000542244 ALPK3Q96L96 1907 aa24.07■■□□□ 1.44
DDX11-220ENST00000542244 RPTORQ8N122 1335 aa24.07■■□□□ 1.44
DDX11-220ENST00000542244 TRIOBPQ9H2D6 2365 aa24.06■■□□□ 1.44
DDX11-220ENST00000542244 PRKAR2AP13861 404 aaKnown RBP24.06■■□□□ 1.44
DDX11-220ENST00000542244 SIAH1Q8IUQ4 282 aa24.06■■□□□ 1.44
DDX11-220ENST00000542244 HAUS7Q99871 368 aa24.06■■□□□ 1.44
DDX11-220ENST00000542244 NUDT12Q9BQG2 462 aa24.06■■□□□ 1.44
DDX11-220ENST00000542244 RPAP3Q9H6T3 665 aaPredicted RBP24.06■■□□□ 1.44
DDX11-220ENST00000542244 HMX1Q9NP08 348 aaPredicted RBP24.06■■□□□ 1.44
DDX11-220ENST00000542244 MPHOSPH10O00566 681 aaKnown RBP24.05■■□□□ 1.44
DDX11-220ENST00000542244 CCND3P30281 292 aaPredicted RBP24.05■■□□□ 1.44
DDX11-220ENST00000542244 MAPK4P31152 587 aa24.05■■□□□ 1.44
DDX11-220ENST00000542244 CACNB2Q08289 660 aaPredicted RBP24.05■■□□□ 1.44
DDX11-220ENST00000542244 TMED8Q6PL24 325 aaPredicted RBP24.05■■□□□ 1.44
DDX11-220ENST00000542244 PLEKHH3Q7Z736 793 aa24.05■■□□□ 1.44
DDX11-220ENST00000542244 CABP5Q9NP86 173 aa24.05■■□□□ 1.44
DDX11-220ENST00000542244 FLRT1Q9NZU1 646 aa24.05■■□□□ 1.44
DDX11-220ENST00000542244 SPDYE16A6NNV3 312 aaPredicted RBP24.04■■□□□ 1.44
DDX11-220ENST00000542244 AKR1B1P15121 316 aa24.04■■□□□ 1.44
DDX11-220ENST00000542244 RABGAP1Q9Y3P9 1069 aa24.04■■□□□ 1.44
DDX11-220ENST00000542244 RANBP2P49792 3224 aaKnown RBP24.03■■□□□ 1.44
DDX11-220ENST00000542244 XRCC5P13010 732 aaKnown RBP24.03■■□□□ 1.44
DDX11-220ENST00000542244 TSHZ3Q63HK5 1081 aa24.03■■□□□ 1.44
DDX11-220ENST00000542244 EVI5O60447 810 aa24.02■■□□□ 1.44
DDX11-220ENST00000542244 USP14P54578 494 aa24.02■■□□□ 1.44
DDX11-220ENST00000542244 SOCS4Q8WXH5 440 aa24.02■■□□□ 1.44
DDX11-220ENST00000542244 PUS7LQ9H0K6 701 aaKnown RBP24.02■■□□□ 1.44
DDX11-220ENST00000542244 ZKSCAN1P17029 563 aaPredicted RBP24.01■■□□□ 1.43
DDX11-220ENST00000542244 PDE3AQ14432 1141 aa24.01■■□□□ 1.43
DDX11-220ENST00000542244 NECAB2Q7Z6G3 386 aa24.01■■□□□ 1.43
DDX11-220ENST00000542244 LRRCC1Q9C099 1032 aa24.01■■□□□ 1.43
DDX11-220ENST00000542244 OGDHLQ9ULD0 1010 aa24.01■■□□□ 1.43
DDX11-220ENST00000542244 BAZ2AQ9UIF9 1905 aaKnown RBP24.01■■□□□ 1.43
DDX11-220ENST00000542244 USP17L12C9JPN9 530 aa24■■□□□ 1.43
DDX11-220ENST00000542244 USP17L21D6R901 530 aa24■■□□□ 1.43
DDX11-220ENST00000542244 MAP2K5Q13163 448 aa24■■□□□ 1.43
DDX11-220ENST00000542244 WDR78Q5VTH9 848 aa24■■□□□ 1.43
DDX11-220ENST00000542244 LHX8Q68G74 356 aa24■■□□□ 1.43
DDX11-220ENST00000542244 LBX2Q6XYB7 198 aa24■■□□□ 1.43
DDX11-220ENST00000542244 NPLOC4Q8TAT6 608 aa24■■□□□ 1.43
DDX11-220ENST00000542244 GTF3C2Q8WUA4 911 aaPredicted RBP24■■□□□ 1.43
DDX11-220ENST00000542244 STAP2Q9UGK3 403 aa24■■□□□ 1.43
DDX11-220ENST00000542244 NR2E3Q9Y5X4 410 aa24■■□□□ 1.43
DDX11-220ENST00000542244 PTPREP23469 700 aa23.99■■□□□ 1.43
DDX11-220ENST00000542244 RGS2P41220 211 aa23.99■■□□□ 1.43
DDX11-220ENST00000542244 C12orf60Q5U649 245 aa23.99■■□□□ 1.43
DDX11-220ENST00000542244 CCAR1Q8IX12 1150 aaKnown RBP23.99■■□□□ 1.43
DDX11-220ENST00000542244 C7orf61Q8IZ16 206 aa23.99■■□□□ 1.43
DDX11-220ENST00000542244 SPICE1Q8N0Z3 855 aa23.99■■□□□ 1.43
DDX11-220ENST00000542244 APBA2Q99767 749 aa23.99■■□□□ 1.43
DDX11-220ENST00000542244 RLFQ13129 1914 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms