RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 MPP2Q14168 576 aa6.35□□□□□ -1.39
LEMD3-204ENST00000542032 PLCL1Q15111 1095 aa6.35□□□□□ -1.39
LEMD3-204ENST00000542032 FAM196AQ6ZSG2 479 aa6.35□□□□□ -1.39
LEMD3-204ENST00000542032 HOMEZQ8IX15 550 aa6.35□□□□□ -1.39
LEMD3-204ENST00000542032 DNAJB8Q8NHS0 232 aa6.35□□□□□ -1.39
LEMD3-204ENST00000542032 PPP1R13LQ8WUF5 828 aa6.35□□□□□ -1.39
LEMD3-204ENST00000542032 ASB11Q8WXH4 323 aa6.35□□□□□ -1.39
LEMD3-204ENST00000542032 LRRC3Q9BY71 257 aa6.35□□□□□ -1.39
LEMD3-204ENST00000542032 COPRSQ9NQ92 184 aa6.35□□□□□ -1.39
LEMD3-204ENST00000542032 MBNL3Q9NUK0 354 aaKnown RBP6.35□□□□□ -1.39
LEMD3-204ENST00000542032 LMCD1Q9NZU5 365 aa6.35□□□□□ -1.39
LEMD3-204ENST00000542032 ADAMTS6Q9UKP5 1117 aa6.35□□□□□ -1.39
LEMD3-204ENST00000542032 ST14Q9Y5Y6 855 aa6.35□□□□□ -1.39
LEMD3-204ENST00000542032 CAPN6Q9Y6Q1 641 aa6.35□□□□□ -1.39
LEMD3-204ENST00000542032 MINDY4BA8MYZ0 360 aa6.34□□□□□ -1.39
LEMD3-204ENST00000542032 RBAK-RBAKDNI3L0D1 243 aa6.34□□□□□ -1.39
LEMD3-204ENST00000542032 BPNT1O95861 308 aa6.34□□□□□ -1.39
LEMD3-204ENST00000542032 RNASE1P07998 156 aaKnown RBP6.34□□□□□ -1.39
LEMD3-204ENST00000542032 MFAP1P55081 439 aaKnown RBP6.34□□□□□ -1.39
LEMD3-204ENST00000542032 FAM160A1Q05DH4 1040 aa6.34□□□□□ -1.39
LEMD3-204ENST00000542032 FBXL19Q6PCT2 694 aa6.34□□□□□ -1.39
LEMD3-204ENST00000542032 TTLL10Q6ZVT0 673 aa6.34□□□□□ -1.39
LEMD3-204ENST00000542032 REC114Q7Z4M0 266 aa6.34□□□□□ -1.39
LEMD3-204ENST00000542032 SLFN12Q8IYM2 578 aa6.34□□□□□ -1.39
LEMD3-204ENST00000542032 MFSD4AQ8N468 514 aa6.34□□□□□ -1.39
LEMD3-204ENST00000542032 GOLM1Q8NBJ4 401 aa6.34□□□□□ -1.39
LEMD3-204ENST00000542032 XAGE3Q8WTP9 111 aa6.34□□□□□ -1.39
LEMD3-204ENST00000542032 DPH2Q9BQC3 489 aaPredicted RBP6.34□□□□□ -1.39
LEMD3-204ENST00000542032 TPX2Q9ULW0 747 aaKnown RBP6.34□□□□□ -1.39
LEMD3-204ENST00000542032 ROBO2Q9HCK4 1378 aa6.33□□□□□ -1.4
LEMD3-204ENST00000542032 PLCG1P19174 1290 aa6.33□□□□□ -1.4
LEMD3-204ENST00000542032 KIR3DL1P43629 444 aa6.33□□□□□ -1.4
LEMD3-204ENST00000542032 ANGEL2Q5VTE6 544 aaKnown RBP6.33□□□□□ -1.4
LEMD3-204ENST00000542032 CYB5D2Q8WUJ1 264 aa6.33□□□□□ -1.4
LEMD3-204ENST00000542032 HSPA12BQ96MM6 686 aa6.33□□□□□ -1.4
LEMD3-204ENST00000542032 RBM47A0AV96 593 aaKnown RBP6.32□□□□□ -1.4
LEMD3-204ENST00000542032 UPK3BL1B0FP48 263 aa6.32□□□□□ -1.4
LEMD3-204ENST00000542032 UPK3BL2E5RIL1 263 aa6.32□□□□□ -1.4
LEMD3-204ENST00000542032 PSPNO60542 156 aa6.32□□□□□ -1.4
LEMD3-204ENST00000542032 EIF4A3P38919 411 aaKnown RBP6.32□□□□□ -1.4
LEMD3-204ENST00000542032 SNAP47Q5SQN1 464 aa6.32□□□□□ -1.4
LEMD3-204ENST00000542032 DIEXFQ68CQ4 756 aaKnown RBP6.32□□□□□ -1.4
LEMD3-204ENST00000542032 SLC23A3Q6PIS1 610 aa6.32□□□□□ -1.4
LEMD3-204ENST00000542032 THAP5Q7Z6K1 395 aa6.32□□□□□ -1.4
LEMD3-204ENST00000542032 CDH24Q86UP0 819 aa6.32□□□□□ -1.4
LEMD3-204ENST00000542032 FBXO27Q8NI29 283 aa6.32□□□□□ -1.4
LEMD3-204ENST00000542032 Q96M66 194 aa6.32□□□□□ -1.4
LEMD3-204ENST00000542032 TOX2Q96NM4 488 aa6.32□□□□□ -1.4
LEMD3-204ENST00000542032 REV1Q9UBZ9 1251 aa6.32□□□□□ -1.4
LEMD3-204ENST00000542032 CEP131Q9UPN4 1083 aa6.32□□□□□ -1.4
LEMD3-204ENST00000542032 DNAJA2O60884 412 aa6.31□□□□□ -1.4
LEMD3-204ENST00000542032 HTR3BO95264 441 aa6.31□□□□□ -1.4
LEMD3-204ENST00000542032 CYP7A1P22680 504 aa6.31□□□□□ -1.4
LEMD3-204ENST00000542032 ETV3P41162 512 aa6.31□□□□□ -1.4
LEMD3-204ENST00000542032 TNK2Q07912 1038 aa6.31□□□□□ -1.4
LEMD3-204ENST00000542032 HS2ST1Q7LGA3 356 aa6.31□□□□□ -1.4
LEMD3-204ENST00000542032 ATG4DQ86TL0 474 aaPredicted RBP6.31□□□□□ -1.4
LEMD3-204ENST00000542032 C1QL4Q86Z23 238 aa6.31□□□□□ -1.4
LEMD3-204ENST00000542032 FAM13CQ8NE31 585 aa6.31□□□□□ -1.4
LEMD3-204ENST00000542032 PIWIL2Q8TC59 973 aaKnown RBP6.31□□□□□ -1.4
LEMD3-204ENST00000542032 ADAMTS1Q9UHI8 967 aa6.31□□□□□ -1.4
LEMD3-204ENST00000542032 GGT7Q9UJ14 662 aa6.31□□□□□ -1.4
LEMD3-204ENST00000542032 FAM155AB1AL88 458 aaPredicted RBP6.3□□□□□ -1.4
LEMD3-204ENST00000542032 BIN1O00499 593 aa6.3□□□□□ -1.4
LEMD3-204ENST00000542032 ATE1O95260 518 aa6.3□□□□□ -1.4
LEMD3-204ENST00000542032 CRKP46108 304 aa6.3□□□□□ -1.4
LEMD3-204ENST00000542032 YARSP54577 528 aaKnown RBP6.3□□□□□ -1.4
LEMD3-204ENST00000542032 LRRN4CLQ8ND94 238 aa6.3□□□□□ -1.4
LEMD3-204ENST00000542032 PI4K2BQ8TCG2 481 aa6.3□□□□□ -1.4
LEMD3-204ENST00000542032 ZNF296Q8WUU4 475 aaPredicted RBP6.3□□□□□ -1.4
LEMD3-204ENST00000542032 RC3H2Q9HBD1 1191 aaKnown RBP6.3□□□□□ -1.4
LEMD3-204ENST00000542032 SUPT16HQ9Y5B9 1047 aaKnown RBP6.3□□□□□ -1.4
LEMD3-204ENST00000542032 CHURC1-FNTBB4DL54 471 aa6.29□□□□□ -1.4
LEMD3-204ENST00000542032 GRIN3BO60391 1043 aa6.29□□□□□ -1.4
LEMD3-204ENST00000542032 SRFP11831 508 aa6.29□□□□□ -1.4
LEMD3-204ENST00000542032 ZP2Q05996 745 aa6.29□□□□□ -1.4
LEMD3-204ENST00000542032 FLAD1Q8NFF5 587 aa6.29□□□□□ -1.4
LEMD3-204ENST00000542032 ZSCAN18Q8TBC5 510 aaPredicted RBP6.29□□□□□ -1.4
LEMD3-204ENST00000542032 BACH2Q9BYV9 841 aa6.29□□□□□ -1.4
LEMD3-204ENST00000542032 BCL11AQ9H165 835 aa6.29□□□□□ -1.4
LEMD3-204ENST00000542032 ATP13A1Q9HD20 1204 aa6.29□□□□□ -1.4
LEMD3-204ENST00000542032 H3BS24 57 aa6.28□□□□□ -1.4
LEMD3-204ENST00000542032 CBX7O95931 251 aa6.28□□□□□ -1.4
LEMD3-204ENST00000542032 VAMP1P23763 118 aa6.28□□□□□ -1.4
LEMD3-204ENST00000542032 IKZF1Q13422 519 aa6.28□□□□□ -1.4
LEMD3-204ENST00000542032 CWF19L2Q2TBE0 894 aaKnown RBP6.28□□□□□ -1.4
LEMD3-204ENST00000542032 CDKAL1Q5VV42 579 aa6.28□□□□□ -1.4
LEMD3-204ENST00000542032 LRRC56Q8IYG6 542 aaPredicted RBP6.28□□□□□ -1.4
LEMD3-204ENST00000542032 TMEM87AQ8NBN3 555 aa6.28□□□□□ -1.4
LEMD3-204ENST00000542032 FAM168AQ92567 244 aa6.28□□□□□ -1.4
LEMD3-204ENST00000542032 VWCEQ96DN2 955 aa6.28□□□□□ -1.4
LEMD3-204ENST00000542032 EHMT1Q9H9B1 1298 aa6.28□□□□□ -1.4
LEMD3-204ENST00000542032 BRMS1Q9HCU9 246 aa6.28□□□□□ -1.4
LEMD3-204ENST00000542032 PRDM7Q9NQW5 492 aa6.28□□□□□ -1.4
LEMD3-204ENST00000542032 METTL5Q9NRN9 209 aaKnown RBP6.28□□□□□ -1.4
LEMD3-204ENST00000542032 RAPGEFL1Q9UHV5 662 aa6.28□□□□□ -1.4
LEMD3-204ENST00000542032 TLR3O15455 904 aaKnown RBP6.27□□□□□ -1.41
LEMD3-204ENST00000542032 ZSCAN22P10073 491 aaPredicted RBP6.27□□□□□ -1.41
LEMD3-204ENST00000542032 FANCCQ00597 558 aa6.27□□□□□ -1.41
LEMD3-204ENST00000542032 RNF141Q8WVD5 230 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms