RNA–Protein interactions for RNA: ENST00000542029.1

VTN-203, Transcript of vitronectin, humanhuman

TSL 3

Gene VTN, Length 501 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-203ENST00000542029 FARP2O94887 1054 aaPredicted RBP13.73□□□□□ -0.21
VTN-203ENST00000542029 MBD4O95243 580 aa13.73□□□□□ -0.21
VTN-203ENST00000542029 CATSPERGQ6ZRH7 1159 aa13.73□□□□□ -0.21
VTN-203ENST00000542029 TMEM179Q6ZVK1 233 aa13.73□□□□□ -0.21
VTN-203ENST00000542029 UBE2Q1Q7Z7E8 422 aa13.73□□□□□ -0.21
VTN-203ENST00000542029 SDR42E1Q8WUS8 393 aa13.73□□□□□ -0.21
VTN-203ENST00000542029 EDC3Q96F86 508 aaKnown RBP13.73□□□□□ -0.21
VTN-203ENST00000542029 CCDC17Q96LX7 622 aa13.73□□□□□ -0.21
VTN-203ENST00000542029 DEFB118Q96PH6 123 aa13.73□□□□□ -0.21
VTN-203ENST00000542029 ARMT1Q9H993 441 aa13.73□□□□□ -0.21
VTN-203ENST00000542029 PAK6Q9NQU5 681 aaPredicted RBP13.73□□□□□ -0.21
VTN-203ENST00000542029 RBPJLQ9UBG7 517 aa13.73□□□□□ -0.21
VTN-203ENST00000542029 TNRC18O15417 2968 aaPredicted RBP13.73□□□□□ -0.21
VTN-203ENST00000542029 RPTORQ8N122 1335 aa13.72□□□□□ -0.21
VTN-203ENST00000542029 MPHOSPH10O00566 681 aaKnown RBP13.72□□□□□ -0.21
VTN-203ENST00000542029 TFRCP02786 760 aaKnown RBP13.72□□□□□ -0.21
VTN-203ENST00000542029 VCAM1P19320 739 aa13.72□□□□□ -0.21
VTN-203ENST00000542029 LRRFIP1Q32MZ4 808 aaKnown RBP13.72□□□□□ -0.21
VTN-203ENST00000542029 LBX2Q6XYB7 198 aa13.72□□□□□ -0.21
VTN-203ENST00000542029 DPF3Q92784 378 aa13.72□□□□□ -0.21
VTN-203ENST00000542029 PAGR1Q9BTK6 254 aa13.72□□□□□ -0.21
VTN-203ENST00000542029 SH2D4AQ9H788 454 aa13.72□□□□□ -0.21
VTN-203ENST00000542029 CWC22Q9HCG8 908 aaKnown RBP13.72□□□□□ -0.21
VTN-203ENST00000542029 TXNRD2Q9NNW7 524 aa13.72□□□□□ -0.21
VTN-203ENST00000542029 HMX1Q9NP08 348 aaPredicted RBP13.72□□□□□ -0.21
VTN-203ENST00000542029 NR2E3Q9Y5X4 410 aa13.72□□□□□ -0.21
VTN-203ENST00000542029 RGS2P41220 211 aa13.71□□□□□ -0.21
VTN-203ENST00000542029 SEPT2Q15019 361 aa13.71□□□□□ -0.21
VTN-203ENST00000542029 ZYXQ15942 572 aaKnown RBP13.71□□□□□ -0.21
VTN-203ENST00000542029 HABP4Q5JVS0 413 aaKnown RBP13.71□□□□□ -0.21
VTN-203ENST00000542029 PLEKHH3Q7Z736 793 aa13.71□□□□□ -0.21
VTN-203ENST00000542029 ANKLE1Q8NAG6 615 aa13.71□□□□□ -0.21
VTN-203ENST00000542029 ACER1Q8TDN7 264 aa13.71□□□□□ -0.21
VTN-203ENST00000542029 LPAR1Q92633 364 aa13.71□□□□□ -0.21
VTN-203ENST00000542029 CRISPLD2Q9H0B8 497 aa13.71□□□□□ -0.21
VTN-203ENST00000542029 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.71□□□□□ -0.212e-12■■□□□ 13.2
VTN-203ENST00000542029 HOXC10Q9NYD6 342 aa13.71□□□□□ -0.21
VTN-203ENST00000542029 PCDH10Q9P2E7 1040 aa13.71□□□□□ -0.21
VTN-203ENST00000542029 RBBP6Q7Z6E9 1792 aaKnown RBP13.71□□□□□ -0.22
VTN-203ENST00000542029 CYP2B6P20813 491 aa13.7□□□□□ -0.22
VTN-203ENST00000542029 GUCY1A2P33402 732 aa13.7□□□□□ -0.22
VTN-203ENST00000542029 Q3C1V9 767 aa13.7□□□□□ -0.22
VTN-203ENST00000542029 C12orf60Q5U649 245 aa13.7□□□□□ -0.22
VTN-203ENST00000542029 GPR142Q7Z601 462 aa13.7□□□□□ -0.22
VTN-203ENST00000542029 ARHGEF10LQ9HCE6 1279 aa13.7□□□□□ -0.22
VTN-203ENST00000542029 PHIPQ8WWQ0 1821 aa13.69□□□□□ -0.22
VTN-203ENST00000542029 USP17L12C9JPN9 530 aa13.69□□□□□ -0.22
VTN-203ENST00000542029 USP17L21D6R901 530 aa13.69□□□□□ -0.22
VTN-203ENST00000542029 PRKAB2O43741 272 aa13.69□□□□□ -0.22
VTN-203ENST00000542029 SMARCA5O60264 1052 aaPredicted RBP13.69□□□□□ -0.22
VTN-203ENST00000542029 ZFYP08048 801 aaPredicted RBP13.69□□□□□ -0.22
VTN-203ENST00000542029 ZKSCAN1P17029 563 aaPredicted RBP13.69□□□□□ -0.22
VTN-203ENST00000542029 COG2Q14746 738 aa13.69□□□□□ -0.22
VTN-203ENST00000542029 MORN1Q5T089 497 aa13.69□□□□□ -0.22
VTN-203ENST00000542029 GIMAP6Q6P9H5 292 aa13.69□□□□□ -0.22
VTN-203ENST00000542029 MB21D1Q8N884 522 aa13.69□□□□□ -0.22
VTN-203ENST00000542029 KBTBD3Q8NAB2 608 aa13.69□□□□□ -0.22
VTN-203ENST00000542029 USP6NLQ92738 828 aa13.69□□□□□ -0.22
VTN-203ENST00000542029 APBA2Q99767 749 aa13.69□□□□□ -0.22
VTN-203ENST00000542029 PORCNQ9H237 461 aa13.69□□□□□ -0.22
VTN-203ENST00000542029 RPAP3Q9H6T3 665 aaPredicted RBP13.69□□□□□ -0.22
VTN-203ENST00000542029 SLC4A4Q9Y6R1 1079 aa13.69□□□□□ -0.22
VTN-203ENST00000542029 IVNS1ABPQ9Y6Y0 642 aa13.69□□□□□ -0.22
VTN-203ENST00000542029 PTPRFP10586 1907 aa13.68□□□□□ -0.22
VTN-203ENST00000542029 SPDYE16A6NNV3 312 aaPredicted RBP13.68□□□□□ -0.22
VTN-203ENST00000542029 H0YGN5 161 aa13.68□□□□□ -0.22
VTN-203ENST00000542029 ERC2O15083 957 aa13.68□□□□□ -0.22
VTN-203ENST00000542029 CYP2D6P10635 497 aa13.68□□□□□ -0.22
VTN-203ENST00000542029 CDK8P49336 464 aa13.68□□□□□ -0.22
VTN-203ENST00000542029 ICA1Q05084 483 aa13.68□□□□□ -0.22
VTN-203ENST00000542029 MAP3K21Q5TCX8 1036 aa13.68□□□□□ -0.22
VTN-203ENST00000542029 C16orf86Q6ZW13 317 aa13.68□□□□□ -0.22
VTN-203ENST00000542029 NECAB2Q7Z6G3 386 aa13.68□□□□□ -0.22
VTN-203ENST00000542029 TRIB2Q92519 343 aa13.68□□□□□ -0.22
VTN-203ENST00000542029 DYNLL2Q96FJ2 89 aa13.68□□□□□ -0.22
VTN-203ENST00000542029 KANSL2Q9H9L4 492 aa13.68□□□□□ -0.22
VTN-203ENST00000542029 ARPP21Q9UBL0 812 aaPredicted RBP13.68□□□□□ -0.22
VTN-203ENST00000542029 LOC285556D6RIA3 1793 aa13.68□□□□□ -0.22
VTN-203ENST00000542029 ZSWIM8A7E2V4 1837 aa13.67□□□□□ -0.22
VTN-203ENST00000542029 A0A1W2PRG0 241 aa13.67□□□□□ -0.22
VTN-203ENST00000542029 SLC15A5A6NIM6 579 aa13.67□□□□□ -0.22
VTN-203ENST00000542029 PRKAR2AP13861 404 aaKnown RBP13.67□□□□□ -0.22
VTN-203ENST00000542029 GNAT2P19087 354 aa13.67□□□□□ -0.22
VTN-203ENST00000542029 MAP2K5Q13163 448 aa13.67□□□□□ -0.22
VTN-203ENST00000542029 SLC44A5Q8NCS7 719 aa13.67□□□□□ -0.22
VTN-203ENST00000542029 APPBP2Q92624 585 aa13.67□□□□□ -0.22
VTN-203ENST00000542029 STRBPQ96SI9 672 aaKnown RBP13.67□□□□□ -0.22
VTN-203ENST00000542029 PUS7LQ9H0K6 701 aaKnown RBP13.67□□□□□ -0.22
VTN-203ENST00000542029 VCPKMTQ9H867 229 aa13.67□□□□□ -0.22
VTN-203ENST00000542029 ZBTB47Q9UFB7 747 aaPredicted RBP13.67□□□□□ -0.22
VTN-203ENST00000542029 TMX2Q9Y320 296 aa13.67□□□□□ -0.22
VTN-203ENST00000542029 SIPA1L1O43166 1804 aa13.67□□□□□ -0.22
VTN-203ENST00000542029 TTC41PQ6P2S7 1318 aa13.66□□□□□ -0.22
VTN-203ENST00000542029 RNF113AO15541 343 aaKnown RBP13.66□□□□□ -0.22
VTN-203ENST00000542029 STRNO43815 780 aa13.66□□□□□ -0.22
VTN-203ENST00000542029 EVI5O60447 810 aa13.66□□□□□ -0.22
VTN-203ENST00000542029 PEX10O60683 326 aa13.66□□□□□ -0.22
VTN-203ENST00000542029 CNMDO75829 334 aa13.66□□□□□ -0.22
VTN-203ENST00000542029 HOXC6P09630 235 aa13.66□□□□□ -0.22
VTN-203ENST00000542029 AKR1B1P15121 316 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms