RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 MYH1P12882 1939 aa11.64□□□□□ -0.55
YBX3-212ENST00000542002 DOCK1Q14185 1865 aa11.64□□□□□ -0.55
YBX3-212ENST00000542002 C19orf81C9J6K1 198 aa11.64□□□□□ -0.55
YBX3-212ENST00000542002 MPHOSPH10O00566 681 aaKnown RBP11.64□□□□□ -0.55
YBX3-212ENST00000542002 PEX10O60683 326 aa11.64□□□□□ -0.55
YBX3-212ENST00000542002 PRDM1O75626 825 aa11.64□□□□□ -0.55
YBX3-212ENST00000542002 ECM2O94769 699 aaPredicted RBP11.64□□□□□ -0.55
YBX3-212ENST00000542002 BCRP11274 1271 aa11.64□□□□□ -0.55
YBX3-212ENST00000542002 RASA1P20936 1047 aa11.64□□□□□ -0.55
YBX3-212ENST00000542002 TDO2P48775 406 aa11.64□□□□□ -0.55
YBX3-212ENST00000542002 ZYXQ15942 572 aaKnown RBP11.64□□□□□ -0.55
YBX3-212ENST00000542002 CTU1Q7Z7A3 348 aaKnown RBP11.64□□□□□ -0.55
YBX3-212ENST00000542002 TICAM2Q86XR7 235 aa11.64□□□□□ -0.55
YBX3-212ENST00000542002 PROCA1Q8NCQ7 364 aaPredicted RBP11.64□□□□□ -0.55
YBX3-212ENST00000542002 DDRGK1Q96HY6 314 aa11.64□□□□□ -0.55
YBX3-212ENST00000542002 ABHD8Q96I13 439 aa11.64□□□□□ -0.55
YBX3-212ENST00000542002 CABP5Q9NP86 173 aa11.64□□□□□ -0.55
YBX3-212ENST00000542002 SLC45A1Q9Y2W3 748 aa11.64□□□□□ -0.55
YBX3-212ENST00000542002 FGAP02671 866 aa11.63□□□□□ -0.55
YBX3-212ENST00000542002 HSPD1P10809 573 aaKnown RBP11.63□□□□□ -0.55
YBX3-212ENST00000542002 HOXA7P31268 230 aaPredicted RBP11.63□□□□□ -0.55
YBX3-212ENST00000542002 ALX1Q15699 326 aa11.63□□□□□ -0.55
YBX3-212ENST00000542002 IFFO2Q5TF58 517 aa11.63□□□□□ -0.55
YBX3-212ENST00000542002 CWC27Q6UX04 472 aaKnown RBP11.63□□□□□ -0.55
YBX3-212ENST00000542002 OTOP1Q7RTM1 612 aa11.63□□□□□ -0.55
YBX3-212ENST00000542002 NKX2-3Q8TAU0 364 aa11.63□□□□□ -0.55
YBX3-212ENST00000542002 P2RX7Q99572 595 aaKnown RBP11.63□□□□□ -0.55
YBX3-212ENST00000542002 KIAA1683Q9H0B3 1180 aa11.63□□□□□ -0.55
YBX3-212ENST00000542002 ASCC2Q9H1I8 757 aaPredicted RBP11.63□□□□□ -0.55
YBX3-212ENST00000542002 TAOK2Q9UL54 1235 aa11.63□□□□□ -0.55
YBX3-212ENST00000542002 LACTBP83111 547 aaPredicted RBP11.62□□□□□ -0.55
YBX3-212ENST00000542002 CTDSPL2Q05D32 466 aa11.62□□□□□ -0.55
YBX3-212ENST00000542002 PPARAQ07869 468 aa11.62□□□□□ -0.55
YBX3-212ENST00000542002 USP17L2Q6R6M4 530 aa11.62□□□□□ -0.55
YBX3-212ENST00000542002 TMEM179Q6ZVK1 233 aa11.62□□□□□ -0.55
YBX3-212ENST00000542002 CENPQQ7L2Z9 268 aaPredicted RBP11.62□□□□□ -0.55
YBX3-212ENST00000542002 AMOTL1Q8IY63 956 aa11.62□□□□□ -0.55
YBX3-212ENST00000542002 C12orf42Q96LP6 360 aa11.62□□□□□ -0.55
YBX3-212ENST00000542002 CCDC17Q96LX7 622 aa11.62□□□□□ -0.55
YBX3-212ENST00000542002 PARK7Q99497 189 aaKnown RBP11.62□□□□□ -0.55
YBX3-212ENST00000542002 NACAP1Q9BZK3 213 aa11.62□□□□□ -0.55
YBX3-212ENST00000542002 NBPF3Q9H094 633 aa11.62□□□□□ -0.55
YBX3-212ENST00000542002 NAPBQ9H115 298 aa11.62□□□□□ -0.55
YBX3-212ENST00000542002 TRIM17Q9Y577 477 aa11.62□□□□□ -0.55
YBX3-212ENST00000542002 ROBO3Q96MS0 1386 aa11.62□□□□□ -0.55
YBX3-212ENST00000542002 MYH7P12883 1935 aa11.62□□□□□ -0.55
YBX3-212ENST00000542002 NAV1Q8NEY1 1877 aa11.61□□□□□ -0.55
YBX3-212ENST00000542002 HTTP42858 3142 aa11.61□□□□□ -0.55
YBX3-212ENST00000542002 BAZ2AQ9UIF9 1905 aaKnown RBP11.61□□□□□ -0.55
YBX3-212ENST00000542002 IGKV6D-41A0A0C4DH26 115 aa11.61□□□□□ -0.55
YBX3-212ENST00000542002 EEF2P13639 858 aaKnown RBP11.61□□□□□ -0.55
YBX3-212ENST00000542002 FAM47AQ5JRC9 791 aa11.61□□□□□ -0.55
YBX3-212ENST00000542002 ANKRD13CQ8N6S4 541 aa11.61□□□□□ -0.55
YBX3-212ENST00000542002 ERO1AQ96HE7 468 aa11.61□□□□□ -0.55
YBX3-212ENST00000542002 TRIM47Q96LD4 638 aa11.61□□□□□ -0.55
YBX3-212ENST00000542002 MKNK2Q9HBH9 465 aa11.61□□□□□ -0.55
YBX3-212ENST00000542002 TXNRD2Q9NNW7 524 aa11.61□□□□□ -0.55
YBX3-212ENST00000542002 TMOD4Q9NZQ9 345 aa11.61□□□□□ -0.55
YBX3-212ENST00000542002 CCDC171Q6TFL3 1326 aa11.6□□□□□ -0.55
YBX3-212ENST00000542002 FGRP09769 529 aa11.6□□□□□ -0.55
YBX3-212ENST00000542002 VCAM1P19320 739 aa11.6□□□□□ -0.55
YBX3-212ENST00000542002 CHMLP26374 656 aa11.6□□□□□ -0.55
YBX3-212ENST00000542002 Q3C1V9 767 aa11.6□□□□□ -0.55
YBX3-212ENST00000542002 CATSPERGQ6ZRH7 1159 aa11.6□□□□□ -0.55
YBX3-212ENST00000542002 FEZ1Q99689 392 aa11.6□□□□□ -0.55
YBX3-212ENST00000542002 KANSL2Q9H9L4 492 aa11.6□□□□□ -0.55
YBX3-212ENST00000542002 EFCC1Q9HA90 598 aa11.6□□□□□ -0.55
YBX3-212ENST00000542002 RBPJLQ9UBG7 517 aa11.6□□□□□ -0.55
YBX3-212ENST00000542002 ANAPC4Q9UJX5 808 aa11.6□□□□□ -0.55
YBX3-212ENST00000542002 HPS5Q9UPZ3 1129 aa11.6□□□□□ -0.55
YBX3-212ENST00000542002 PTPN22Q9Y2R2 807 aa11.6□□□□□ -0.55
YBX3-212ENST00000542002 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.6□□□□□ -0.55
YBX3-212ENST00000542002 TMX2Q9Y320 296 aa11.6□□□□□ -0.55
YBX3-212ENST00000542002 ATAD5Q96QE3 1844 aa11.59□□□□□ -0.55
YBX3-212ENST00000542002 OSBPP22059 807 aa11.59□□□□□ -0.55
YBX3-212ENST00000542002 PSMC4P43686 418 aa11.59□□□□□ -0.55
YBX3-212ENST00000542002 USP14P54578 494 aa11.59□□□□□ -0.55
YBX3-212ENST00000542002 HERVK_113P62684 666 aa11.59□□□□□ -0.55
YBX3-212ENST00000542002 TFAP4Q01664 338 aa11.59□□□□□ -0.55
YBX3-212ENST00000542002 ICA1Q05084 483 aa11.59□□□□□ -0.55
YBX3-212ENST00000542002 PKN2Q16513 984 aaKnown RBP11.59□□□□□ -0.55
YBX3-212ENST00000542002 ZNF444Q8N0Y2 327 aaPredicted RBP11.59□□□□□ -0.55
YBX3-212ENST00000542002 SPICE1Q8N0Z3 855 aa11.59□□□□□ -0.55
YBX3-212ENST00000542002 SMCR8Q8TEV9 937 aaPredicted RBP11.59□□□□□ -0.55
YBX3-212ENST00000542002 RPAP3Q9H6T3 665 aaPredicted RBP11.59□□□□□ -0.55
YBX3-212ENST00000542002 IL17RBQ9NRM6 502 aa11.59□□□□□ -0.55
YBX3-212ENST00000542002 DIAPH3Q9NSV4 1193 aa11.59□□□□□ -0.55
YBX3-212ENST00000542002 CENPFP49454 3210 aa11.59□□□□□ -0.55
YBX3-212ENST00000542002 USP17L15C9J2P7 530 aa11.58□□□□□ -0.56
YBX3-212ENST00000542002 USP17L13C9JLJ4 530 aa11.58□□□□□ -0.56
YBX3-212ENST00000542002 USP17L11C9JVI0 530 aa11.58□□□□□ -0.56
YBX3-212ENST00000542002 USP17L18D6R9N7 530 aa11.58□□□□□ -0.56
YBX3-212ENST00000542002 USP17L22D6RA61 530 aa11.58□□□□□ -0.56
YBX3-212ENST00000542002 USP17L17D6RBQ6 530 aa11.58□□□□□ -0.56
YBX3-212ENST00000542002 USP17L19D6RCP7 530 aa11.58□□□□□ -0.56
YBX3-212ENST00000542002 USP17L20D6RJB6 530 aa11.58□□□□□ -0.56
YBX3-212ENST00000542002 HIP1O00291 1037 aa11.58□□□□□ -0.56
YBX3-212ENST00000542002 NMT2O60551 498 aa11.58□□□□□ -0.56
YBX3-212ENST00000542002 CNMDO75829 334 aa11.58□□□□□ -0.56
YBX3-212ENST00000542002 HAND2P61296 217 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms