RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 LUC7LQ9NQ29 371 aaKnown RBP18.16■□□□□ 0.5
VARS2-212ENST00000542001 ETF1P62495 437 aaKnown RBP18.16■□□□□ 0.5
VARS2-212ENST00000542001 ZNF804AQ7Z570 1209 aa18.16■□□□□ 0.5
VARS2-212ENST00000542001 FCHSD1Q86WN1 690 aa18.16■□□□□ 0.5
VARS2-212ENST00000542001 PNMA1Q8ND90 353 aa18.16■□□□□ 0.5
VARS2-212ENST00000542001 NELFBQ8WX92 580 aa18.16■□□□□ 0.5
VARS2-212ENST00000542001 GOLGA1Q92805 767 aa18.16■□□□□ 0.5
VARS2-212ENST00000542001 SPAG5Q96R06 1193 aa18.16■□□□□ 0.5
VARS2-212ENST00000542001 CTDNEP1O95476 244 aa18.15■□□□□ 0.5
VARS2-212ENST00000542001 SSR1P43307 286 aaKnown RBP18.15■□□□□ 0.5
VARS2-212ENST00000542001 GNAQP50148 359 aa18.15■□□□□ 0.5
VARS2-212ENST00000542001 OGFRQ9NZT2 677 aa18.15■□□□□ 0.5
VARS2-212ENST00000542001 SAMM50Q9Y512 469 aa18.15■□□□□ 0.5
VARS2-212ENST00000542001 PPLO60437 1756 aa18.15■□□□□ 0.5
VARS2-212ENST00000542001 FAM205CA6NFA0 338 aa18.15■□□□□ 0.5
VARS2-212ENST00000542001 ARHGAP6O43182 974 aa18.15■□□□□ 0.5
VARS2-212ENST00000542001 SEC31AO94979 1220 aaKnown RBP18.15■□□□□ 0.5
VARS2-212ENST00000542001 PARP1P09874 1014 aaKnown RBP18.15■□□□□ 0.5
VARS2-212ENST00000542001 TERF1P54274 439 aa18.15■□□□□ 0.5
VARS2-212ENST00000542001 SPAG1Q07617 926 aa18.15■□□□□ 0.5
VARS2-212ENST00000542001 TRAPPC3LQ5T215 181 aa18.15■□□□□ 0.5
VARS2-212ENST00000542001 NELFCDQ8IXH7 590 aa18.15■□□□□ 0.5
VARS2-212ENST00000542001 FAM207AQ9NSI2 230 aaPredicted RBP18.15■□□□□ 0.5
VARS2-212ENST00000542001 LMTK3Q96Q04 1460 aa18.15■□□□□ 0.5
VARS2-212ENST00000542001 ANKRD13CQ8N6S4 541 aa18.15■□□□□ 0.5
VARS2-212ENST00000542001 A0A1W2PQ27 194 aa18.14■□□□□ 0.5
VARS2-212ENST00000542001 A0A1W2PQ64 194 aa18.14■□□□□ 0.5
VARS2-212ENST00000542001 A0A1W2PQD8 194 aa18.14■□□□□ 0.5
VARS2-212ENST00000542001 PAK1Q13153 545 aa18.14■□□□□ 0.5
VARS2-212ENST00000542001 PPP1R13BQ96KQ4 1090 aa18.14■□□□□ 0.5
VARS2-212ENST00000542001 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.14■□□□□ 0.52e-6■■■■■ 46.8
VARS2-212ENST00000542001 CEMIPQ8WUJ3 1361 aa18.14■□□□□ 0.49
VARS2-212ENST00000542001 SCNN1DP51172 638 aa18.14■□□□□ 0.49
VARS2-212ENST00000542001 LRRC47Q8N1G4 583 aaKnown RBP18.14■□□□□ 0.49
VARS2-212ENST00000542001 PPP2R2CQ9Y2T4 447 aa18.14■□□□□ 0.49
VARS2-212ENST00000542001 TRAF5O00463 557 aa18.14■□□□□ 0.49
VARS2-212ENST00000542001 PRDX5P30044 214 aa18.14■□□□□ 0.49
VARS2-212ENST00000542001 GTF2IP78347 998 aa18.14■□□□□ 0.49
VARS2-212ENST00000542001 KRT79Q5XKE5 535 aa18.14■□□□□ 0.49
VARS2-212ENST00000542001 NOC4LQ9BVI4 516 aaKnown RBP18.14■□□□□ 0.49
VARS2-212ENST00000542001 ARHGEF28Q8N1W1 1705 aaKnown RBP18.14■□□□□ 0.49
VARS2-212ENST00000542001 TECP42680 631 aa18.13■□□□□ 0.49
VARS2-212ENST00000542001 RABL6Q3YEC7 729 aaPredicted RBP18.13■□□□□ 0.49
VARS2-212ENST00000542001 CTR9Q6PD62 1173 aa18.13■□□□□ 0.49
VARS2-212ENST00000542001 CCDC113Q9H0I3 377 aa18.13■□□□□ 0.49
VARS2-212ENST00000542001 TMEM132AQ24JP5 1023 aa18.13■□□□□ 0.49
VARS2-212ENST00000542001 USP49Q70CQ1 688 aa18.13■□□□□ 0.49
VARS2-212ENST00000542001 FMR1NBQ8N0W7 255 aaPredicted RBP18.13■□□□□ 0.49
VARS2-212ENST00000542001 NLRC4Q9NPP4 1024 aa18.13■□□□□ 0.49
VARS2-212ENST00000542001 KIF5AQ12840 1032 aa18.13■□□□□ 0.49
VARS2-212ENST00000542001 MB21D2Q8IYB1 491 aaPredicted RBP18.13■□□□□ 0.49
VARS2-212ENST00000542001 NYXQ9GZU5 481 aa18.13■□□□□ 0.49
VARS2-212ENST00000542001 IMPACTQ9P2X3 320 aa18.13■□□□□ 0.49
VARS2-212ENST00000542001 ZBTB21Q9ULJ3 1066 aa18.13■□□□□ 0.49
VARS2-212ENST00000542001 MED23Q9ULK4 1368 aa18.13■□□□□ 0.49
VARS2-212ENST00000542001 HLA-DOAP06340 250 aa18.13■□□□□ 0.49
VARS2-212ENST00000542001 CYLC1P35663 651 aaPredicted RBP18.13■□□□□ 0.49
VARS2-212ENST00000542001 GSTO1P78417 241 aa18.13■□□□□ 0.49
VARS2-212ENST00000542001 ST5P78524 1137 aa18.13■□□□□ 0.49
VARS2-212ENST00000542001 FEZ1Q99689 392 aa18.13■□□□□ 0.49
VARS2-212ENST00000542001 RBM28Q9NW13 759 aaKnown RBP18.13■□□□□ 0.49
VARS2-212ENST00000542001 TMOD2Q9NZR1 351 aa18.13■□□□□ 0.49
VARS2-212ENST00000542001 USP17L3A6NCW0 530 aa18.12■□□□□ 0.49
VARS2-212ENST00000542001 USP17L4A6NCW7 530 aa18.12■□□□□ 0.49
VARS2-212ENST00000542001 FDPSP14324 419 aaKnown RBP18.12■□□□□ 0.49
VARS2-212ENST00000542001 IL6STP40189 918 aaPredicted RBP18.12■□□□□ 0.49
VARS2-212ENST00000542001 RBM6P78332 1123 aaKnown RBP18.12■□□□□ 0.49
VARS2-212ENST00000542001 USP17L1Q7RTZ2 530 aa18.12■□□□□ 0.49
VARS2-212ENST00000542001 SLC44A5Q8NCS7 719 aa18.12■□□□□ 0.49
VARS2-212ENST00000542001 ENC1O14682 589 aa18.12■□□□□ 0.49
VARS2-212ENST00000542001 CASP14P31944 242 aa18.12■□□□□ 0.49
VARS2-212ENST00000542001 CNGA4Q8IV77 575 aa18.12■□□□□ 0.49
VARS2-212ENST00000542001 DPF2Q92785 391 aa18.12■□□□□ 0.49
VARS2-212ENST00000542001 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.12■□□□□ 0.49
VARS2-212ENST00000542001 CHMP4BP1P59074 171 aa18.12■□□□□ 0.49
VARS2-212ENST00000542001 MFSD14BQ5SR56 506 aa18.12■□□□□ 0.49
VARS2-212ENST00000542001 MAN1B1Q9UKM7 699 aa18.12■□□□□ 0.49
VARS2-212ENST00000542001 CHMP2AO43633 222 aa18.11■□□□□ 0.49
VARS2-212ENST00000542001 EXOSC10Q01780 885 aaKnown RBP18.11■□□□□ 0.49
VARS2-212ENST00000542001 MAEAQ7L5Y9 396 aa18.11■□□□□ 0.49
VARS2-212ENST00000542001 ANKRD2Q9GZV1 360 aa18.11■□□□□ 0.49
VARS2-212ENST00000542001 GBP3Q9H0R5 595 aa18.11■□□□□ 0.49
VARS2-212ENST00000542001 RBM26Q5T8P6 1007 aaKnown RBP18.11■□□□□ 0.49
VARS2-212ENST00000542001 SMARCC2Q8TAQ2 1214 aa18.11■□□□□ 0.49
VARS2-212ENST00000542001 GOPCQ9HD26 462 aa18.11■□□□□ 0.49
VARS2-212ENST00000542001 DLC1Q96QB1 1528 aa18.11■□□□□ 0.49
VARS2-212ENST00000542001 GOLGA6L10A6NI86 522 aa18.11■□□□□ 0.49
VARS2-212ENST00000542001 PRR29P0C7W0 189 aa18.11■□□□□ 0.49
VARS2-212ENST00000542001 SF3A3Q12874 501 aaKnown RBP eCLIP18.11■□□□□ 0.491e-6■□□□□ 9.9
VARS2-212ENST00000542001 CELF1Q92879 486 aaKnown RBP18.11■□□□□ 0.49
VARS2-212ENST00000542001 ISCA1Q9BUE6 129 aa18.11■□□□□ 0.49
VARS2-212ENST00000542001 TMEM131LA2VDJ0 1609 aa18.11■□□□□ 0.49
VARS2-212ENST00000542001 CAPN2P17655 700 aa18.1■□□□□ 0.49
VARS2-212ENST00000542001 DOK7Q18PE1 504 aa18.1■□□□□ 0.49
VARS2-212ENST00000542001 USH1GQ495M9 461 aa18.1■□□□□ 0.49
VARS2-212ENST00000542001 SLF2Q8IX21 1173 aa18.1■□□□□ 0.49
VARS2-212ENST00000542001 IFT81Q8WYA0 676 aa18.1■□□□□ 0.49
VARS2-212ENST00000542001 RSPH14Q9UHP6 348 aa18.1■□□□□ 0.49
VARS2-212ENST00000542001 SMCO2A6NFE2 343 aa18.1■□□□□ 0.49
VARS2-212ENST00000542001 KLRF2D3W0D1 207 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms