RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 MSRAQ9UJ68 235 aa12.19□□□□□ -0.46
CHFR-220ENST00000541817 SMCHD1A6NHR9 2005 aa12.18□□□□□ -0.46
CHFR-220ENST00000541817 GAKO14976 1311 aa12.18□□□□□ -0.46
CHFR-220ENST00000541817 MYBBP1AQ9BQG0 1328 aaKnown RBP12.18□□□□□ -0.46
CHFR-220ENST00000541817 GLRX3O76003 335 aaKnown RBP12.18□□□□□ -0.46
CHFR-220ENST00000541817 GDF11O95390 407 aa12.18□□□□□ -0.46
CHFR-220ENST00000541817 NBPF7P0C2Y1 421 aaPredicted RBP12.18□□□□□ -0.46
CHFR-220ENST00000541817 SLC5A1P13866 664 aa12.18□□□□□ -0.46
CHFR-220ENST00000541817 MYOGP15173 224 aa12.18□□□□□ -0.46
CHFR-220ENST00000541817 RABGGTBP53611 331 aa12.18□□□□□ -0.46
CHFR-220ENST00000541817 C1orf53Q5VUE5 145 aa12.18□□□□□ -0.46
CHFR-220ENST00000541817 ZNF365Q70YC5 407 aa12.18□□□□□ -0.46
CHFR-220ENST00000541817 DZIP1Q86YF9 867 aaKnown RBP12.18□□□□□ -0.46
CHFR-220ENST00000541817 PHOX2BQ99453 314 aa12.18□□□□□ -0.46
CHFR-220ENST00000541817 WDR18Q9BV38 432 aa12.18□□□□□ -0.46
CHFR-220ENST00000541817 TBC1D2Q9BYX2 928 aa12.18□□□□□ -0.46
CHFR-220ENST00000541817 EMILIN3Q9NT22 766 aa12.18□□□□□ -0.46
CHFR-220ENST00000541817 BTBD7Q9P203 1132 aa12.18□□□□□ -0.46
CHFR-220ENST00000541817 PIEZO1Q92508 2521 aa12.17□□□□□ -0.46
CHFR-220ENST00000541817 ERC2O15083 957 aa12.17□□□□□ -0.46
CHFR-220ENST00000541817 SEPT4O43236 478 aa12.17□□□□□ -0.46
CHFR-220ENST00000541817 PGK1P00558 417 aa12.17□□□□□ -0.46
CHFR-220ENST00000541817 HOXC6P09630 235 aa12.17□□□□□ -0.46
CHFR-220ENST00000541817 CSF2RAP15509 400 aa12.17□□□□□ -0.46
CHFR-220ENST00000541817 PHKA1P46020 1223 aa12.17□□□□□ -0.46
CHFR-220ENST00000541817 RHBDL3P58872 404 aa12.17□□□□□ -0.46
CHFR-220ENST00000541817 GRB14Q14449 540 aa12.17□□□□□ -0.46
CHFR-220ENST00000541817 DPP9Q86TI2 863 aa12.17□□□□□ -0.46
CHFR-220ENST00000541817 ANKRD44Q8N8A2 993 aa12.17□□□□□ -0.46
CHFR-220ENST00000541817 ANKS1AQ92625 1134 aa12.17□□□□□ -0.46
CHFR-220ENST00000541817 FBXL18Q96ME1 805 aa12.17□□□□□ -0.46
CHFR-220ENST00000541817 SLC28A3Q9HAS3 691 aa12.17□□□□□ -0.46
CHFR-220ENST00000541817 ABCF2Q9UG63 623 aa12.17□□□□□ -0.46
CHFR-220ENST00000541817 PHF24Q9UPV7 400 aa12.17□□□□□ -0.46
CHFR-220ENST00000541817 IVNS1ABPQ9Y6Y0 642 aa12.17□□□□□ -0.46
CHFR-220ENST00000541817 A0A1W2PQ45 241 aaPredicted RBP12.16□□□□□ -0.46
CHFR-220ENST00000541817 A0A1W2PQY0 241 aa12.16□□□□□ -0.46
CHFR-220ENST00000541817 USP17L10C9JJH3 530 aa12.16□□□□□ -0.46
CHFR-220ENST00000541817 PI4K2BG5E9Z4 385 aa12.16□□□□□ -0.46
CHFR-220ENST00000541817 APBB1O00213 710 aa12.16□□□□□ -0.46
CHFR-220ENST00000541817 TIMP1P01033 207 aa12.16□□□□□ -0.46
CHFR-220ENST00000541817 IGHA2P01877 340 aa12.16□□□□□ -0.46
CHFR-220ENST00000541817 RASIP1Q5U651 963 aa12.16□□□□□ -0.46
CHFR-220ENST00000541817 LENG1Q96BZ8 264 aaPredicted RBP12.16□□□□□ -0.46
CHFR-220ENST00000541817 CERS4Q9HA82 394 aa12.16□□□□□ -0.46
CHFR-220ENST00000541817 RABGAP1Q9Y3P9 1069 aa12.16□□□□□ -0.46
CHFR-220ENST00000541817 KIF16BQ96L93 1317 aa12.15□□□□□ -0.46
CHFR-220ENST00000541817 C19orf81C9J6K1 198 aa12.15□□□□□ -0.46
CHFR-220ENST00000541817 COBLO75128 1261 aa12.15□□□□□ -0.46
CHFR-220ENST00000541817 ADORA2AP29274 412 aa12.15□□□□□ -0.46
CHFR-220ENST00000541817 CCNA1P78396 465 aa12.15□□□□□ -0.46
CHFR-220ENST00000541817 RALBP1Q15311 655 aa12.15□□□□□ -0.46
CHFR-220ENST00000541817 RAB30Q15771 203 aa12.15□□□□□ -0.46
CHFR-220ENST00000541817 MFSD5Q6N075 450 aa12.15□□□□□ -0.46
CHFR-220ENST00000541817 LPIN2Q92539 896 aa12.15□□□□□ -0.46
CHFR-220ENST00000541817 PPP1R12CQ9BZL4 782 aa12.15□□□□□ -0.46
CHFR-220ENST00000541817 SIPA1L1O43166 1804 aa12.15□□□□□ -0.46
CHFR-220ENST00000541817 MROH7-TTC4A0A0A0MT08 1334 aa12.14□□□□□ -0.47
CHFR-220ENST00000541817 WDFY4Q6ZS81 3184 aa12.14□□□□□ -0.47
CHFR-220ENST00000541817 DCDC2CA8MYV0 355 aa12.14□□□□□ -0.47
CHFR-220ENST00000541817 PPIGQ13427 754 aaKnown RBP eCLIP12.14□□□□□ -0.477e-9■■■□□ 17.6
CHFR-220ENST00000541817 ZNF384Q8TF68 577 aa12.14□□□□□ -0.47
CHFR-220ENST00000541817 HERVK_113Q902F9 699 aa12.14□□□□□ -0.47
CHFR-220ENST00000541817 XPNPEP3Q9NQH7 507 aa12.14□□□□□ -0.47
CHFR-220ENST00000541817 DENND2AQ9ULE3 1009 aa12.14□□□□□ -0.47
CHFR-220ENST00000541817 MTCH2Q9Y6C9 303 aa12.14□□□□□ -0.47
CHFR-220ENST00000541817 SALL1Q9NSC2 1324 aa12.13□□□□□ -0.47
CHFR-220ENST00000541817 PRR33A8MZF0 331 aa12.13□□□□□ -0.47
CHFR-220ENST00000541817 TAL1P17542 331 aaPredicted RBP12.13□□□□□ -0.47
CHFR-220ENST00000541817 ADORA1P30542 326 aa12.13□□□□□ -0.47
CHFR-220ENST00000541817 MECOMQ03112 1051 aa12.13□□□□□ -0.47
CHFR-220ENST00000541817 RABL6Q3YEC7 729 aaPredicted RBP12.13□□□□□ -0.47
CHFR-220ENST00000541817 PPP2R2DQ66LE6 453 aa12.13□□□□□ -0.47
CHFR-220ENST00000541817 OLFML2BQ68BL8 750 aa12.13□□□□□ -0.47
CHFR-220ENST00000541817 USP17L2Q6R6M4 530 aa12.13□□□□□ -0.47
CHFR-220ENST00000541817 GTF3C2Q8WUA4 911 aaPredicted RBP12.13□□□□□ -0.47
CHFR-220ENST00000541817 SRCIN1Q9C0H9 1055 aa12.13□□□□□ -0.47
CHFR-220ENST00000541817 DNAJC18Q9H819 358 aa12.13□□□□□ -0.47
CHFR-220ENST00000541817 TBX21Q9UL17 535 aa12.13□□□□□ -0.47
CHFR-220ENST00000541817 SUPT16HQ9Y5B9 1047 aaKnown RBP12.13□□□□□ -0.47
CHFR-220ENST00000541817 PRRC2BQ5JSZ5 2229 aaKnown RBP12.13□□□□□ -0.47
CHFR-220ENST00000541817 CACNA1FO60840 1977 aa12.12□□□□□ -0.47
CHFR-220ENST00000541817 GPR75-ASB3A0A0A6YYF3 556 aa12.12□□□□□ -0.47
CHFR-220ENST00000541817 EPOPA6NHQ4 379 aa12.12□□□□□ -0.47
CHFR-220ENST00000541817 VAMP4O75379 141 aa12.12□□□□□ -0.47
CHFR-220ENST00000541817 ALDH1L1O75891 902 aa12.12□□□□□ -0.47
CHFR-220ENST00000541817 NEFLP07196 543 aa12.12□□□□□ -0.47
CHFR-220ENST00000541817 ASNSP08243 561 aa12.12□□□□□ -0.47
CHFR-220ENST00000541817 CYP2C18P33260 490 aa12.12□□□□□ -0.47
CHFR-220ENST00000541817 IRX5P78411 483 aaPredicted RBP12.12□□□□□ -0.47
CHFR-220ENST00000541817 OTOP2Q7RTS6 562 aa12.12□□□□□ -0.47
CHFR-220ENST00000541817 FAM163AQ96GL9 167 aaPredicted RBP12.12□□□□□ -0.47
CHFR-220ENST00000541817 GNL3LQ9NVN8 582 aaKnown RBP12.12□□□□□ -0.47
CHFR-220ENST00000541817 CDK5RAP2Q96SN8 1893 aa12.12□□□□□ -0.47
CHFR-220ENST00000541817 USP17L15C9J2P7 530 aa12.11□□□□□ -0.47
CHFR-220ENST00000541817 USP17L13C9JLJ4 530 aa12.11□□□□□ -0.47
CHFR-220ENST00000541817 USP17L11C9JVI0 530 aa12.11□□□□□ -0.47
CHFR-220ENST00000541817 USP17L18D6R9N7 530 aa12.11□□□□□ -0.47
CHFR-220ENST00000541817 USP17L22D6RA61 530 aa12.11□□□□□ -0.47
CHFR-220ENST00000541817 USP17L17D6RBQ6 530 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms