RNA–Protein interactions for RNA: ENST00000541735.5

DMD-228, Transcript of dystrophin, humanhuman

TSL 5 BASIC

Gene DMD, Length 7,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-228ENST00000541735 CPSF3Q9UKF6 684 aaKnown RBP7□□□□□ -1.29
DMD-228ENST00000541735 PCDHB13Q9Y5F0 798 aa7□□□□□ -1.29
DMD-228ENST00000541735 RHOXF2BP0C7M4 288 aa7□□□□□ -1.29
DMD-228ENST00000541735 SNAP25P60880 206 aa7□□□□□ -1.29
DMD-228ENST00000541735 CALCOCO2Q13137 446 aa7□□□□□ -1.29
DMD-228ENST00000541735 DCAF4L1Q3SXM0 396 aa7□□□□□ -1.29
DMD-228ENST00000541735 LARP7Q4G0J3 582 aaKnown RBP eCLIP7□□□□□ -1.29
DMD-228ENST00000541735 TMEM259Q4ZIN3 620 aa7□□□□□ -1.29
DMD-228ENST00000541735 GKAP1Q5VSY0 366 aaPredicted RBP7□□□□□ -1.29
DMD-228ENST00000541735 ATP6V1E2Q96A05 226 aa7□□□□□ -1.29
DMD-228ENST00000541735 RHOXF2Q9BQY4 288 aa7□□□□□ -1.29
DMD-228ENST00000541735 NOL12Q9UGY1 213 aaKnown RBP eCLIP7□□□□□ -1.29
DMD-228ENST00000541735 SWAP70Q9UH65 585 aa7□□□□□ -1.29
DMD-228ENST00000541735 V9GYY5 206 aaPredicted RBP7□□□□□ -1.29
DMD-228ENST00000541735 INO80B-WBP1J3KQ70 363 aa7□□□□□ -1.29
DMD-228ENST00000541735 CALUO43852 315 aaPredicted RBP7□□□□□ -1.29
DMD-228ENST00000541735 CCNA1P78396 465 aa7□□□□□ -1.29
DMD-228ENST00000541735 ADCY1Q08828 1119 aa7□□□□□ -1.29
DMD-228ENST00000541735 HERC4Q5GLZ8 1057 aaPredicted RBP7□□□□□ -1.29
DMD-228ENST00000541735 NOC4LQ9BVI4 516 aaKnown RBP7□□□□□ -1.29
DMD-228ENST00000541735 INO80BQ9C086 356 aaPredicted RBP7□□□□□ -1.29
DMD-228ENST00000541735 POLKQ9UBT6 870 aa7□□□□□ -1.29
DMD-228ENST00000541735 KDRP35968 1356 aa7□□□□□ -1.29
DMD-228ENST00000541735 TNNC2P02585 160 aa7□□□□□ -1.29
DMD-228ENST00000541735 GNAT2P19087 354 aa7□□□□□ -1.29
DMD-228ENST00000541735 VPS41P49754 854 aa7□□□□□ -1.29
DMD-228ENST00000541735 EPHB1P54762 984 aa7□□□□□ -1.29
DMD-228ENST00000541735 PDE1CQ14123 709 aaPredicted RBP7□□□□□ -1.29
DMD-228ENST00000541735 CERKLQ49MI3 558 aaPredicted RBP7□□□□□ -1.29
DMD-228ENST00000541735 DNAJC10Q8IXB1 793 aa7□□□□□ -1.29
DMD-228ENST00000541735 ZNF668Q96K58 619 aaPredicted RBP7□□□□□ -1.29
DMD-228ENST00000541735 GPBP1L1Q9HC44 474 aaPredicted RBP7□□□□□ -1.29
DMD-228ENST00000541735 MTUS1Q9ULD2 1270 aa7□□□□□ -1.29
DMD-228ENST00000541735 DOLKQ9UPQ8 538 aa7□□□□□ -1.29
DMD-228ENST00000541735 BRD4O60885 1362 aaPredicted RBP7□□□□□ -1.29
DMD-228ENST00000541735 ADGRL1O94910 1474 aa7□□□□□ -1.29
DMD-228ENST00000541735 C21orf2O43822 256 aa7□□□□□ -1.29
DMD-228ENST00000541735 TBC1D8O95759 1140 aa7□□□□□ -1.29
DMD-228ENST00000541735 ZFYP08048 801 aaPredicted RBP7□□□□□ -1.29
DMD-228ENST00000541735 ZNF165P49910 485 aa7□□□□□ -1.29
DMD-228ENST00000541735 ADCY7P51828 1080 aa7□□□□□ -1.29
DMD-228ENST00000541735 ZNF131P52739 623 aa7□□□□□ -1.29
DMD-228ENST00000541735 CEP85LQ5SZL2 805 aa7□□□□□ -1.29
DMD-228ENST00000541735 ZNF365Q70YC5 407 aa7□□□□□ -1.29
DMD-228ENST00000541735 KRT27Q7Z3Y8 459 aa7□□□□□ -1.29
DMD-228ENST00000541735 PPP4R1Q8TF05 950 aa7□□□□□ -1.29
DMD-228ENST00000541735 DNM3Q9UQ16 869 aa7□□□□□ -1.29
DMD-228ENST00000541735 SLC4A7Q9Y6M7 1214 aa7□□□□□ -1.29
DMD-228ENST00000541735 IFNB1P01574 187 aa6.99□□□□□ -1.29
DMD-228ENST00000541735 VIMP08670 466 aaKnown RBP6.99□□□□□ -1.29
DMD-228ENST00000541735 HPDP32754 393 aaPredicted RBP6.99□□□□□ -1.29
DMD-228ENST00000541735 FAM149B1Q96BN6 582 aa6.99□□□□□ -1.29
DMD-228ENST00000541735 CCDC127Q96BQ5 260 aa6.99□□□□□ -1.29
DMD-228ENST00000541735 ZSCAN16Q9H4T2 348 aaPredicted RBP6.99□□□□□ -1.29
DMD-228ENST00000541735 SLC8A2Q9UPR5 921 aa6.99□□□□□ -1.29
DMD-228ENST00000541735 FGD6Q6ZV73 1430 aa6.99□□□□□ -1.29
DMD-228ENST00000541735 ALDH3A1P30838 453 aa6.99□□□□□ -1.29
DMD-228ENST00000541735 CALCRLQ16602 461 aa6.99□□□□□ -1.29
DMD-228ENST00000541735 ANO6Q4KMQ2 910 aa6.99□□□□□ -1.29
DMD-228ENST00000541735 GLYCTKQ8IVS8 523 aa6.99□□□□□ -1.29
DMD-228ENST00000541735 GPR101Q96P66 508 aaPredicted RBP6.99□□□□□ -1.29
DMD-228ENST00000541735 SRPK1Q96SB4 655 aaKnown RBP6.99□□□□□ -1.29
DMD-228ENST00000541735 NSRP1Q9H0G5 558 aaKnown RBP6.99□□□□□ -1.29
DMD-228ENST00000541735 CTTNBP2NLQ9P2B4 639 aa6.99□□□□□ -1.29
DMD-228ENST00000541735 PNMA2Q9UL42 364 aa6.99□□□□□ -1.29
DMD-228ENST00000541735 DKC1O60832 514 aaKnown RBP eCLIP6.99□□□□□ -1.29
DMD-228ENST00000541735 OCM2P0CE71 109 aa6.99□□□□□ -1.29
DMD-228ENST00000541735 OCMP0CE72 109 aaPredicted RBP6.99□□□□□ -1.29
DMD-228ENST00000541735 C20orf194Q5TEA3 1177 aa6.99□□□□□ -1.29
DMD-228ENST00000541735 GABPB2Q8TAK5 448 aaPredicted RBP6.99□□□□□ -1.29
DMD-228ENST00000541735 MGARPQ8TDB4 240 aa6.99□□□□□ -1.29
DMD-228ENST00000541735 ASIC3Q9UHC3 531 aa6.99□□□□□ -1.29
DMD-228ENST00000541735 NCOA2Q15596 1464 aa6.99□□□□□ -1.29
DMD-228ENST00000541735 TXNDC9O14530 226 aa6.99□□□□□ -1.29
DMD-228ENST00000541735 CTAGE5O15320 804 aa6.99□□□□□ -1.29
DMD-228ENST00000541735 ATF7P17544 494 aaPredicted RBP6.99□□□□□ -1.29
DMD-228ENST00000541735 KCNA6P17658 529 aa6.99□□□□□ -1.29
DMD-228ENST00000541735 GYG1P46976 350 aa6.99□□□□□ -1.29
DMD-228ENST00000541735 ZBTB41Q5SVQ8 909 aa6.99□□□□□ -1.29
DMD-228ENST00000541735 KSR2Q6VAB6 950 aa6.99□□□□□ -1.29
DMD-228ENST00000541735 TTC25Q96NG3 672 aa6.99□□□□□ -1.29
DMD-228ENST00000541735 TRPC5Q9UL62 973 aaPredicted RBP6.99□□□□□ -1.29
DMD-228ENST00000541735 ARHGEF11O15085 1522 aa6.99□□□□□ -1.29
DMD-228ENST00000541735 NVLO15381 856 aaKnown RBP6.99□□□□□ -1.29
DMD-228ENST00000541735 HEXIM1O94992 359 aaKnown RBP6.99□□□□□ -1.29
DMD-228ENST00000541735 RFC1P35251 1148 aaPredicted RBP6.99□□□□□ -1.29
DMD-228ENST00000541735 MTHFSDQ2M296 383 aaKnown RBP6.99□□□□□ -1.29
DMD-228ENST00000541735 USPL1Q5W0Q7 1092 aa6.99□□□□□ -1.29
DMD-228ENST00000541735 ELMSAN1Q6PJG2 1045 aa6.99□□□□□ -1.29
DMD-228ENST00000541735 WDR66Q8TBY9 1149 aa6.99□□□□□ -1.29
DMD-228ENST00000541735 NUF2Q9BZD4 464 aa6.99□□□□□ -1.29
DMD-228ENST00000541735 SH3TC1Q8TE82 1336 aa6.99□□□□□ -1.29
DMD-228ENST00000541735 BICDL2A1A5D9 508 aa6.99□□□□□ -1.29
DMD-228ENST00000541735 PPEF1O14829 653 aaPredicted RBP6.99□□□□□ -1.29
DMD-228ENST00000541735 ADCY5O95622 1261 aa6.99□□□□□ -1.29
DMD-228ENST00000541735 TMEM191BP0C7N4 346 aa6.99□□□□□ -1.29
DMD-228ENST00000541735 ASIC2Q16515 512 aa6.99□□□□□ -1.29
DMD-228ENST00000541735 SRGAP1Q7Z6B7 1085 aa6.99□□□□□ -1.29
DMD-228ENST00000541735 ADAT2Q7Z6V5 191 aaKnown RBP6.99□□□□□ -1.29
DMD-228ENST00000541735 RILPQ96NA2 401 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms