RNA–Protein interactions for RNA: ENST00000541478.5

OTUB1-210, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-210ENST00000541478 CNTNAP5Q8WYK1 1306 aa23.26■■□□□ 1.31
OTUB1-210ENST00000541478 BTBD18B2RXH4 712 aa23.26■■□□□ 1.31
OTUB1-210ENST00000541478 F8W031 263 aaPredicted RBP23.26■■□□□ 1.31
OTUB1-210ENST00000541478 RASA1P20936 1047 aa23.26■■□□□ 1.31
OTUB1-210ENST00000541478 CDK8P49336 464 aa23.26■■□□□ 1.31
OTUB1-210ENST00000541478 TYRO3Q06418 890 aa23.26■■□□□ 1.31
OTUB1-210ENST00000541478 SNW1Q13573 536 aaKnown RBP23.26■■□□□ 1.31
OTUB1-210ENST00000541478 SASS6Q6UVJ0 657 aa23.26■■□□□ 1.31
OTUB1-210ENST00000541478 HHIPL2Q6UWX4 724 aa23.26■■□□□ 1.31
OTUB1-210ENST00000541478 CKAP2LQ8IYA6 745 aa23.26■■□□□ 1.31
OTUB1-210ENST00000541478 ENGASEQ8NFI3 743 aa23.26■■□□□ 1.31
OTUB1-210ENST00000541478 TEKT1Q969V4 418 aa23.26■■□□□ 1.31
OTUB1-210ENST00000541478 PDLIM2Q96JY6 352 aa23.26■■□□□ 1.31
OTUB1-210ENST00000541478 BRMS1Q9HCU9 246 aa23.26■■□□□ 1.31
OTUB1-210ENST00000541478 GNAQP50148 359 aa23.25■■□□□ 1.31
OTUB1-210ENST00000541478 PKN1Q16512 942 aa23.25■■□□□ 1.31
OTUB1-210ENST00000541478 SLC44A5Q8NCS7 719 aa23.25■■□□□ 1.31
OTUB1-210ENST00000541478 V9GY48 417 aaPredicted RBP23.25■■□□□ 1.31
OTUB1-210ENST00000541478 MYH1P12882 1939 aa23.25■■□□□ 1.31
OTUB1-210ENST00000541478 CHRNA5P30532 468 aa23.24■■□□□ 1.31
OTUB1-210ENST00000541478 DBNDD1Q9H9R9 158 aa23.24■■□□□ 1.31
OTUB1-210ENST00000541478 SLX4Q8IY92 1834 aa23.24■■□□□ 1.31
OTUB1-210ENST00000541478 STRIP1Q5VSL9 837 aa23.24■■□□□ 1.31
OTUB1-210ENST00000541478 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.24■■□□□ 1.31
OTUB1-210ENST00000541478 CMA1P23946 247 aa23.23■■□□□ 1.31
OTUB1-210ENST00000541478 KRT2P35908 639 aa23.23■■□□□ 1.31
OTUB1-210ENST00000541478 FMR1NBQ8N0W7 255 aaPredicted RBP23.23■■□□□ 1.31
OTUB1-210ENST00000541478 SRBD1Q8N5C6 995 aaKnown RBP23.23■■□□□ 1.31
OTUB1-210ENST00000541478 SUPT20HQ8NEM7 779 aa23.23■■□□□ 1.31
OTUB1-210ENST00000541478 PHF20Q9BVI0 1012 aa23.23■■□□□ 1.31
OTUB1-210ENST00000541478 SNED1Q8TER0 1413 aa23.23■■□□□ 1.31
OTUB1-210ENST00000541478 USP17L3A6NCW0 530 aa23.22■■□□□ 1.31
OTUB1-210ENST00000541478 USP17L4A6NCW7 530 aa23.22■■□□□ 1.31
OTUB1-210ENST00000541478 CAVIN2O95810 425 aa23.22■■□□□ 1.31
OTUB1-210ENST00000541478 PTPAQ15257 358 aa23.22■■□□□ 1.31
OTUB1-210ENST00000541478 USP17L1Q7RTZ2 530 aa23.22■■□□□ 1.31
OTUB1-210ENST00000541478 NEDD1Q8NHV4 660 aa23.22■■□□□ 1.31
OTUB1-210ENST00000541478 FAM200AQ8TCP9 573 aa23.22■■□□□ 1.31
OTUB1-210ENST00000541478 VPS54Q9P1Q0 977 aa23.22■■□□□ 1.31
OTUB1-210ENST00000541478 STX8Q9UNK0 236 aa23.22■■□□□ 1.31
OTUB1-210ENST00000541478 CEP131Q9UPN4 1083 aa23.22■■□□□ 1.31
OTUB1-210ENST00000541478 PICALMQ13492 652 aa23.22■■□□□ 1.31
OTUB1-210ENST00000541478 GRM4Q14833 912 aa23.22■■□□□ 1.31
OTUB1-210ENST00000541478 GRIPAP1Q4V328 841 aa23.22■■□□□ 1.31
OTUB1-210ENST00000541478 MRIQ9BWK5 157 aa23.22■■□□□ 1.31
OTUB1-210ENST00000541478 MRVI1Q9Y6F6 885 aa23.22■■□□□ 1.31
OTUB1-210ENST00000541478 A0A1B0GVL5 298 aa23.21■■□□□ 1.31
OTUB1-210ENST00000541478 ECE2O60344 883 aa23.21■■□□□ 1.31
OTUB1-210ENST00000541478 SCG2P13521 617 aa23.21■■□□□ 1.31
OTUB1-210ENST00000541478 AXDND1Q5T1B0 1012 aaPredicted RBP23.21■■□□□ 1.31
OTUB1-210ENST00000541478 FAM43AQ8N2R8 423 aa23.21■■□□□ 1.31
OTUB1-210ENST00000541478 USP40Q9NVE5 1235 aa23.21■■□□□ 1.31
OTUB1-210ENST00000541478 MARCKSP29966 332 aaPredicted RBP23.2■■□□□ 1.3
OTUB1-210ENST00000541478 SCNN1DP51172 638 aa23.2■■□□□ 1.3
OTUB1-210ENST00000541478 NDUFA8P51970 172 aa23.2■■□□□ 1.3
OTUB1-210ENST00000541478 C7orf43Q8WVR3 580 aa23.2■■□□□ 1.3
OTUB1-210ENST00000541478 MXD3Q9BW11 206 aa23.2■■□□□ 1.3
OTUB1-210ENST00000541478 C10orf71Q711Q0 1435 aa23.2■■□□□ 1.3
OTUB1-210ENST00000541478 WDHD1O75717 1129 aaPredicted RBP23.19■■□□□ 1.3
OTUB1-210ENST00000541478 HDLBPQ00341 1268 aaKnown RBP23.19■■□□□ 1.3
OTUB1-210ENST00000541478 NR5A1Q13285 461 aa23.19■■□□□ 1.3
OTUB1-210ENST00000541478 PFKFB3Q16875 520 aaPredicted RBP23.19■■□□□ 1.3
OTUB1-210ENST00000541478 TMEM47Q9BQJ4 181 aa23.19■■□□□ 1.3
OTUB1-210ENST00000541478 LZTS2Q9BRK4 669 aa23.19■■□□□ 1.3
OTUB1-210ENST00000541478 PLIN4Q96Q06 1357 aa23.19■■□□□ 1.3
OTUB1-210ENST00000541478 CUTAO60888 179 aa23.19■■□□□ 1.3
OTUB1-210ENST00000541478 CRKP46108 304 aa23.19■■□□□ 1.3
OTUB1-210ENST00000541478 HS1BP3Q53T59 392 aa23.19■■□□□ 1.3
OTUB1-210ENST00000541478 ZDHHC15Q96MV8 337 aa23.19■■□□□ 1.3
OTUB1-210ENST00000541478 ZNF219Q9P2Y4 722 aaPredicted RBP23.19■■□□□ 1.3
OTUB1-210ENST00000541478 SWAP70Q9UH65 585 aa23.19■■□□□ 1.3
OTUB1-210ENST00000541478 KIAA2012Q0VF49 1180 aa23.18■■□□□ 1.3
OTUB1-210ENST00000541478 SLC16A10Q8TF71 515 aa23.18■■□□□ 1.3
OTUB1-210ENST00000541478 SDF4Q9BRK5 362 aa23.18■■□□□ 1.3
OTUB1-210ENST00000541478 MYO3BQ8WXR4 1341 aa23.18■■□□□ 1.3
OTUB1-210ENST00000541478 hCG_1642624A0A1W2PR95 340 aa23.17■■□□□ 1.3
OTUB1-210ENST00000541478 HLA-DOAP06340 250 aa23.17■■□□□ 1.3
OTUB1-210ENST00000541478 PFKFB1P16118 471 aa23.17■■□□□ 1.3
OTUB1-210ENST00000541478 GABPAQ06546 454 aa23.17■■□□□ 1.3
OTUB1-210ENST00000541478 ANO6Q4KMQ2 910 aa23.17■■□□□ 1.3
OTUB1-210ENST00000541478 DACT2Q5SW24 774 aa23.17■■□□□ 1.3
OTUB1-210ENST00000541478 APOBEC3HQ6NTF7 200 aaKnown RBP23.17■■□□□ 1.3
OTUB1-210ENST00000541478 CDC42EP5Q6NZY7 148 aa23.17■■□□□ 1.3
OTUB1-210ENST00000541478 KRI1Q8N9T8 703 aaKnown RBP23.17■■□□□ 1.3
OTUB1-210ENST00000541478 OXER1Q8TDS5 423 aa23.17■■□□□ 1.3
OTUB1-210ENST00000541478 OSBPL5Q9H0X9 879 aaPredicted RBP23.17■■□□□ 1.3
OTUB1-210ENST00000541478 NOL7Q9UMY1 257 aaKnown RBP23.17■■□□□ 1.3
OTUB1-210ENST00000541478 TOB1P50616 345 aaPredicted RBP23.17■■□□□ 1.3
OTUB1-210ENST00000541478 CABP5Q9NP86 173 aa23.17■■□□□ 1.3
OTUB1-210ENST00000541478 SH3GLB2Q9NR46 395 aa23.17■■□□□ 1.3
OTUB1-210ENST00000541478 MAD2L2Q9UI95 211 aa23.17■■□□□ 1.3
OTUB1-210ENST00000541478 SERPINB13Q9UIV8 391 aa23.17■■□□□ 1.3
OTUB1-210ENST00000541478 MORC2Q9Y6X9 1032 aaPredicted RBP23.17■■□□□ 1.3
OTUB1-210ENST00000541478 BMP15O95972 392 aa23.16■■□□□ 1.3
OTUB1-210ENST00000541478 TOP1P11387 765 aaKnown RBP23.16■■□□□ 1.3
OTUB1-210ENST00000541478 CALML3P27482 149 aa23.16■■□□□ 1.3
OTUB1-210ENST00000541478 STX1AQ16623 288 aa23.16■■□□□ 1.3
OTUB1-210ENST00000541478 AOC3Q16853 763 aa23.16■■□□□ 1.3
OTUB1-210ENST00000541478 SHISA4Q96DD7 197 aa23.16■■□□□ 1.3
OTUB1-210ENST00000541478 TIGD1Q96MW7 591 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms