RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 UBAC1Q9BSL1 405 aa19.74■□□□□ 0.75
SPIDR-227ENST00000541342 NAV1Q8NEY1 1877 aa19.73■□□□□ 0.75
SPIDR-227ENST00000541342 ERICH2A1L162 156 aa19.73■□□□□ 0.75
SPIDR-227ENST00000541342 SBK1Q52WX2 424 aa19.73■□□□□ 0.75
SPIDR-227ENST00000541342 RTFDC1Q9BY42 306 aaPredicted RBP19.73■□□□□ 0.75
SPIDR-227ENST00000541342 RIMBP2O15034 1052 aa19.73■□□□□ 0.75
SPIDR-227ENST00000541342 USP17L8P0C7I0 530 aa19.73■□□□□ 0.75
SPIDR-227ENST00000541342 GSTO1P78417 241 aa19.73■□□□□ 0.75
SPIDR-227ENST00000541342 SLC4A8Q2Y0W8 1093 aa19.73■□□□□ 0.75
SPIDR-227ENST00000541342 ENAHQ8N8S7 591 aaPredicted RBP19.73■□□□□ 0.75
SPIDR-227ENST00000541342 HSD3B7Q9H2F3 369 aa19.73■□□□□ 0.75
SPIDR-227ENST00000541342 ARPP21Q9UBL0 812 aaPredicted RBP19.73■□□□□ 0.75
SPIDR-227ENST00000541342 SPTLC2O15270 562 aa19.73■□□□□ 0.75
SPIDR-227ENST00000541342 CDKL5O76039 1030 aa19.73■□□□□ 0.75
SPIDR-227ENST00000541342 YEATS4O95619 227 aa19.73■□□□□ 0.75
SPIDR-227ENST00000541342 STK38Q15208 465 aa19.73■□□□□ 0.75
SPIDR-227ENST00000541342 KCNG4Q8TDN1 519 aa19.73■□□□□ 0.75
SPIDR-227ENST00000541342 ZSCAN10Q96SZ4 725 aaPredicted RBP19.73■□□□□ 0.75
SPIDR-227ENST00000541342 BIN1O00499 593 aa19.72■□□□□ 0.75
SPIDR-227ENST00000541342 GSDMDP57764 484 aa19.72■□□□□ 0.75
SPIDR-227ENST00000541342 PPP4CP60510 307 aa19.72■□□□□ 0.75
SPIDR-227ENST00000541342 IFNKQ9P0W0 207 aa19.72■□□□□ 0.75
SPIDR-227ENST00000541342 PCP11498 1178 aaKnown RBP19.72■□□□□ 0.75
SPIDR-227ENST00000541342 MFSD14BQ5SR56 506 aa19.72■□□□□ 0.75
SPIDR-227ENST00000541342 MASTLQ96GX5 879 aa19.72■□□□□ 0.75
SPIDR-227ENST00000541342 MCM9Q9NXL9 1143 aa19.72■□□□□ 0.75
SPIDR-227ENST00000541342 IMPACTQ9P2X3 320 aa19.72■□□□□ 0.75
SPIDR-227ENST00000541342 MORC2Q9Y6X9 1032 aaPredicted RBP19.72■□□□□ 0.75
SPIDR-227ENST00000541342 ALDH1B1P30837 517 aa19.71■□□□□ 0.75
SPIDR-227ENST00000541342 SLC15A2Q16348 729 aa19.71■□□□□ 0.75
SPIDR-227ENST00000541342 SYNE3Q6ZMZ3 975 aa19.71■□□□□ 0.75
SPIDR-227ENST00000541342 ZNF654Q8IZM8 581 aa19.71■□□□□ 0.75
SPIDR-227ENST00000541342 TMTC2Q8N394 836 aa19.71■□□□□ 0.75
SPIDR-227ENST00000541342 WDHD1O75717 1129 aaPredicted RBP19.71■□□□□ 0.75
SPIDR-227ENST00000541342 ZNF202O95125 648 aa19.71■□□□□ 0.75
SPIDR-227ENST00000541342 ALG1Q9BT22 464 aa19.71■□□□□ 0.75
SPIDR-227ENST00000541342 ORC4O43929 436 aa19.71■□□□□ 0.75
SPIDR-227ENST00000541342 IARSP41252 1262 aaKnown RBP19.71■□□□□ 0.75
SPIDR-227ENST00000541342 KIF23Q02241 960 aaPredicted RBP19.71■□□□□ 0.75
SPIDR-227ENST00000541342 ELF2Q15723 593 aa19.7■□□□□ 0.74
SPIDR-227ENST00000541342 FBXO38Q6PIJ6 1188 aa19.7■□□□□ 0.74
SPIDR-227ENST00000541342 CPLX2Q6PUV4 134 aaKnown RBP19.7■□□□□ 0.74
SPIDR-227ENST00000541342 PPP1R13BQ96KQ4 1090 aa19.7■□□□□ 0.74
SPIDR-227ENST00000541342 FAM205AQ6ZU69 1335 aa19.7■□□□□ 0.74
SPIDR-227ENST00000541342 PFKFB1P16118 471 aa19.7■□□□□ 0.74
SPIDR-227ENST00000541342 USP5P45974 858 aa19.7■□□□□ 0.74
SPIDR-227ENST00000541342 RTN1Q16799 776 aa19.7■□□□□ 0.74
SPIDR-227ENST00000541342 QSER1Q2KHR3 1735 aa19.7■□□□□ 0.74
SPIDR-227ENST00000541342 BAG3O95817 575 aa19.69■□□□□ 0.74
SPIDR-227ENST00000541342 IFNAR1P17181 557 aa19.69■□□□□ 0.74
SPIDR-227ENST00000541342 SF3A1Q15459 793 aaKnown RBP19.69■□□□□ 0.74
SPIDR-227ENST00000541342 TMC6Q7Z403 805 aa19.69■□□□□ 0.74
SPIDR-227ENST00000541342 BRAPQ7Z569 592 aa19.69■□□□□ 0.74
SPIDR-227ENST00000541342 CMTR1Q8N1G2 835 aaKnown RBP19.69■□□□□ 0.74
SPIDR-227ENST00000541342 LRRN4CLQ8ND94 238 aa19.69■□□□□ 0.74
SPIDR-227ENST00000541342 DDX60LQ5H9U9 1706 aaKnown RBP19.69■□□□□ 0.74
SPIDR-227ENST00000541342 NMT2O60551 498 aa19.69■□□□□ 0.74
SPIDR-227ENST00000541342 SMC2O95347 1197 aa19.69■□□□□ 0.74
SPIDR-227ENST00000541342 FMNL1O95466 1100 aaPredicted RBP19.69■□□□□ 0.74
SPIDR-227ENST00000541342 LDHCP07864 332 aa19.69■□□□□ 0.74
SPIDR-227ENST00000541342 BTDP43251 543 aa19.69■□□□□ 0.74
SPIDR-227ENST00000541342 NLRP12P59046 1061 aa19.69■□□□□ 0.74
SPIDR-227ENST00000541342 GTF2IP78347 998 aa19.69■□□□□ 0.74
SPIDR-227ENST00000541342 FAM47AQ5JRC9 791 aa19.69■□□□□ 0.74
SPIDR-227ENST00000541342 C12orf60Q5U649 245 aa19.69■□□□□ 0.74
SPIDR-227ENST00000541342 FANCBQ8NB91 859 aa19.69■□□□□ 0.74
SPIDR-227ENST00000541342 TGFBRAP1Q8WUH2 860 aa19.69■□□□□ 0.74
SPIDR-227ENST00000541342 ERO1AQ96HE7 468 aa19.69■□□□□ 0.74
SPIDR-227ENST00000541342 SLC26A6Q9BXS9 759 aa19.69■□□□□ 0.74
SPIDR-227ENST00000541342 STK36Q9NRP7 1315 aa19.69■□□□□ 0.74
SPIDR-227ENST00000541342 SLC3A2P08195 630 aaKnown RBP19.69■□□□□ 0.74
SPIDR-227ENST00000541342 ANO1Q5XXA6 986 aa19.69■□□□□ 0.74
SPIDR-227ENST00000541342 ZNF397Q8NF99 534 aaPredicted RBP19.69■□□□□ 0.74
SPIDR-227ENST00000541342 NUP133Q8WUM0 1156 aa19.69■□□□□ 0.74
SPIDR-227ENST00000541342 FAM53CQ9NYF3 392 aa19.69■□□□□ 0.74
SPIDR-227ENST00000541342 SLX4Q8IY92 1834 aa19.69■□□□□ 0.74
SPIDR-227ENST00000541342 GPR75-ASB3A0A0A6YYF3 556 aa19.68■□□□□ 0.74
SPIDR-227ENST00000541342 KIF20AO95235 890 aa19.68■□□□□ 0.74
SPIDR-227ENST00000541342 GUCY1A2P33402 732 aa19.68■□□□□ 0.74
SPIDR-227ENST00000541342 RCAN1P53805 252 aa19.68■□□□□ 0.74
SPIDR-227ENST00000541342 DPP8Q6V1X1 898 aaPredicted RBP19.68■□□□□ 0.74
SPIDR-227ENST00000541342 ZNF622Q969S3 477 aaKnown RBP eCLIP19.68■□□□□ 0.742e-7■□□□□ 8.8
SPIDR-227ENST00000541342 COA1Q9GZY4 146 aa19.68■□□□□ 0.74
SPIDR-227ENST00000541342 L2HGDHQ9H9P8 463 aa19.68■□□□□ 0.74
SPIDR-227ENST00000541342 SSRP1Q08945 709 aaKnown RBP19.68■□□□□ 0.74
SPIDR-227ENST00000541342 ATP1A3P13637 1013 aa19.68■□□□□ 0.74
SPIDR-227ENST00000541342 CMA1P23946 247 aa19.68■□□□□ 0.74
SPIDR-227ENST00000541342 IFIT1BQ5T764 474 aaKnown RBP19.68■□□□□ 0.74
SPIDR-227ENST00000541342 KRT40Q6A162 431 aa19.68■□□□□ 0.74
SPIDR-227ENST00000541342 IQCA1Q86XH1 822 aa19.68■□□□□ 0.74
SPIDR-227ENST00000541342 C2CD5Q86YS7 1000 aa19.68■□□□□ 0.74
SPIDR-227ENST00000541342 RGS22Q8NE09 1264 aa19.68■□□□□ 0.74
SPIDR-227ENST00000541342 TBC1D22AQ8WUA7 517 aa19.68■□□□□ 0.74
SPIDR-227ENST00000541342 TAOK2Q9UL54 1235 aa19.68■□□□□ 0.74
SPIDR-227ENST00000541342 MYH6P13533 1939 aa19.67■□□□□ 0.74
SPIDR-227ENST00000541342 DYNLL2Q96FJ2 89 aa19.67■□□□□ 0.74
SPIDR-227ENST00000541342 MAPKAPK5Q8IW41 473 aa19.67■□□□□ 0.74
SPIDR-227ENST00000541342 CCDC82Q8N4S0 544 aa19.67■□□□□ 0.74
SPIDR-227ENST00000541342 NOL10Q9BSC4 688 aaKnown RBP19.67■□□□□ 0.74
SPIDR-227ENST00000541342 ZC3H12CQ9C0D7 883 aaKnown RBP19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms